Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq12 102 1e-16
>seq12
Length=4789767
Score = 102 bits (112), Expect = 1e-16
Identities = 504/799 (63%), Gaps = 75/799 (9%)
Strand=Plus/Minus
Query 145537 TAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCC 145596
||||||| ||||| ||| | ||| | | ||| |||| ||| |||| | | | || ||
Sbjct 3897146 TAGACCGACATCTTCATTGCGATTGTCTTGTGCGGGTCGTACCCCTTAATCACGAATTCG 3897087
Query 145597 TCCGCCCTGAAGTCATCTATGTCCTCCACCCG----CCTCAGGATCCTGAGC-CTGGGAA 145651
|| ||| | || |||| || | |||||| || | |||| || |||| ||
Sbjct 3897086 TCAGCCTTCCAGCCATCAATA-CTGCCACCCTTTTCCCGCTTGATCTCAAGTTCTGGAAA 3897028
Query 145652 AGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACG 145710
| || | |||||| | || || ||| ||| || | || ||||||| || ||||||
Sbjct 3897027 TGCGC--GTGGCTCCCGCTCTAGTTGGGTCTTTAGAGCATCGACGTGGTCGATATAGACG 3896970
Query 145711 TGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACC 145770
|||||||| |||| |||||| | | | || ||| | || | | ||| |||| |
Sbjct 3896969 TGCGCGTCTCCCATGACGTGTGTAAGGCTTCCAGGCACCAGATCGCAAACGTGAGCGAGC 3896910
Query 145771 ATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCC 145830
|||| ||||| || | |||||| || || ||||| || || || || ||||| || |
Sbjct 3896909 ATGTGTGTCAGTAGTGCGTAGCTTGCAATATTGAATGGAACGCCAAGACCCATATCGCAG 3896850
Query 145831 GAGCGCTGGTACAGCTGGCAGGAGAGCT--CCC-------------CGCC---------- 145865
|| ||||| |||| || || ||| | ||| ||||
Sbjct 3896849 GATCGCTGATACAATTGACAATGGAGGTGGCCCTTCGGCTTGGTCTCGCCGTTGCCCTCT 3896790
Query 145866 --CGCC---------------------ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGG 145901
|||| || |||||||| ||| | | ||| || |||||
Sbjct 3896789 TCCGCCTCTGCCTGTCTCGGGAATGAGACATAGAACTGAGCAAAC-ATGTGACACGGCGG 3896731
Query 145902 CAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTC 145961
|| |||| |||| ||| |||||||||||||| |||| | | | || ||
Sbjct 3896730 CAACACCATCTTAGGCAAGTCTCGCGGGTTCCAGGCGGAAAGGATCA---TTCGGCGATC 3896674
Query 145962 G---GGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCG 146018
| || ||| | | || ||| | |||| |||||||| ||||| || ||
Sbjct 3896673 GTAAGGATTCGTACGCAGCTTGTGTATGACGTCCGCAAGCTGGTCGACGCCTTGGCCGGT 3896614
Query 146019 GTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGAC 146078
||| || || | |||||||| |||| |||||||| | ||||||||| || |||||
Sbjct 3896613 GTAGTCAGTTGACGCATCCACGTAGTCGGCGCCGAAGTGTCGCCACTGGAAGCCATAGAC 3896554
Query 146079 GGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGA 146138
||| || ||||| || || | ||| || || | | ||||| || |||||
Sbjct 3896553 GGGTCCAAGGTCGCCCTCCTTACGGTGGGTCAATCCTAGGTTGTCAAGGAACTCGCGGGA 3896494
Query 146139 CCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCTCATTGGAGTC--CGTGG 146194
|||||| | ||||||||||| ||||| |||||| || || ||| | ||||
Sbjct 3896493 GCCGTTGCCATCCCAGATCTTCACGCCCACCTCGCTCAGTGC----GAGAGACGACGTGT 3896438
Query 146195 ACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGG 146254
||| || |||||||| ||||| ||| ||| | | |||||| | ||| || |
Sbjct 3896437 TCCCTTCGACAAACCAGAGGAGCTCAGCGATGACGGCGCGGTGGAAGACGCGCTTTGTCG 3896378
Query 146255 TCAGC--AGGGGGAACTGG 146271
| ||| |||| ||| |||
Sbjct 3896377 TAAGCAAAGGGAGAATTGG 3896359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076534465440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |