Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02- 10] 36 sequences; 42,868,360 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq12 102 1e-16 >seq12 Length=4789767 Score = 102 bits (112), Expect = 1e-16 Identities = 504/799 (63%), Gaps = 75/799 (9%) Strand=Plus/Minus Query 145537 TAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCC 145596 ||||||| ||||| ||| | ||| | | ||| |||| ||| |||| | | | || || Sbjct 3897146 TAGACCGACATCTTCATTGCGATTGTCTTGTGCGGGTCGTACCCCTTAATCACGAATTCG 3897087 Query 145597 TCCGCCCTGAAGTCATCTATGTCCTCCACCCG----CCTCAGGATCCTGAGC-CTGGGAA 145651 || ||| | || |||| || | |||||| || | |||| || |||| || Sbjct 3897086 TCAGCCTTCCAGCCATCAATA-CTGCCACCCTTTTCCCGCTTGATCTCAAGTTCTGGAAA 3897028 Query 145652 AGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACG 145710 | || | |||||| | || || ||| ||| || | || ||||||| || |||||| Sbjct 3897027 TGCGC--GTGGCTCCCGCTCTAGTTGGGTCTTTAGAGCATCGACGTGGTCGATATAGACG 3896970 Query 145711 TGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACC 145770 |||||||| |||| |||||| | | | || ||| | || | | ||| |||| | Sbjct 3896969 TGCGCGTCTCCCATGACGTGTGTAAGGCTTCCAGGCACCAGATCGCAAACGTGAGCGAGC 3896910 Query 145771 ATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCC 145830 |||| ||||| || | |||||| || || ||||| || || || || ||||| || | Sbjct 3896909 ATGTGTGTCAGTAGTGCGTAGCTTGCAATATTGAATGGAACGCCAAGACCCATATCGCAG 3896850 Query 145831 GAGCGCTGGTACAGCTGGCAGGAGAGCT--CCC-------------CGCC---------- 145865 || ||||| |||| || || ||| | ||| |||| Sbjct 3896849 GATCGCTGATACAATTGACAATGGAGGTGGCCCTTCGGCTTGGTCTCGCCGTTGCCCTCT 3896790 Query 145866 --CGCC---------------------ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGG 145901 |||| || |||||||| ||| | | ||| || ||||| Sbjct 3896789 TCCGCCTCTGCCTGTCTCGGGAATGAGACATAGAACTGAGCAAAC-ATGTGACACGGCGG 3896731 Query 145902 CAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTC 145961 || |||| |||| ||| |||||||||||||| |||| | | | || || Sbjct 3896730 CAACACCATCTTAGGCAAGTCTCGCGGGTTCCAGGCGGAAAGGATCA---TTCGGCGATC 3896674 Query 145962 G---GGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCG 146018 | || ||| | | || ||| | |||| |||||||| ||||| || || Sbjct 3896673 GTAAGGATTCGTACGCAGCTTGTGTATGACGTCCGCAAGCTGGTCGACGCCTTGGCCGGT 3896614 Query 146019 GTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGAC 146078 ||| || || | |||||||| |||| |||||||| | ||||||||| || ||||| Sbjct 3896613 GTAGTCAGTTGACGCATCCACGTAGTCGGCGCCGAAGTGTCGCCACTGGAAGCCATAGAC 3896554 Query 146079 GGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGA 146138 ||| || ||||| || || | ||| || || | | ||||| || ||||| Sbjct 3896553 GGGTCCAAGGTCGCCCTCCTTACGGTGGGTCAATCCTAGGTTGTCAAGGAACTCGCGGGA 3896494 Query 146139 CCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCTCATTGGAGTC--CGTGG 146194 |||||| | ||||||||||| ||||| |||||| || || ||| | |||| Sbjct 3896493 GCCGTTGCCATCCCAGATCTTCACGCCCACCTCGCTCAGTGC----GAGAGACGACGTGT 3896438 Query 146195 ACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGG 146254 ||| || |||||||| ||||| ||| ||| | | |||||| | ||| || | Sbjct 3896437 TCCCTTCGACAAACCAGAGGAGCTCAGCGATGACGGCGCGGTGGAAGACGCGCTTTGTCG 3896378 Query 146255 TCAGC--AGGGGGAACTGG 146271 | ||| |||| ||| ||| Sbjct 3896377 TAAGCAAAGGGAGAATTGG 3896359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076534465440