Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02- 10] 36 sequences; 42,868,360 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq33 96.9 3e-15 >seq33 Length=3634720 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | ||||||||||| || ||||| ||||| | Sbjct 1474704 CCGCCACGAAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1474763 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| || | ||||| ||||| ||||| ||| | || || | ||||||||| ||| Sbjct 1474764 AGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGGGGA 1474823 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| || || | | ||| |||||| | |||| Sbjct 1474824 ATTCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATAGTATCCGAAGACTCCACC 1474883 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | ||| |||||||| || || Sbjct 1474884 TCAAGGGTGATGGTCTTTCCAGT 1474906 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | || |||||||| |||||||| ||||||| Sbjct 1474248 CCACCACGAAGGCGGAGGACGAGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCCGAG 1474307 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| | ||||||||| ||| |||||||| | || |||| ||||||||| || Sbjct 1474308 AGCGTTCGACCGTCCTCCAACTGCTTGCCCGCGAAGATGAGTCGCTGCTGGTCTGGTGGG 1474367 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||| || || | ||| ||||| | ||| Sbjct 1474368 ATGCCCTCCTTGTCTTGAATCTTGGACTTTACGTTATCGATGGTATCGGATGACTCAACC 1474427 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||||||||| | || ||||| || || ||||| Sbjct 1474428 TCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1474474 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | ||| || ||||| || ||||| ||||| | Sbjct 1474476 CCACCACGGAGTCGGAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAG 1474535 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| || | ||||| ||||| ||||| || | || | || ||||||||| ||| Sbjct 1474536 AGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGG 1474595 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| || || | | ||| ||||| | ||| Sbjct 1474596 ATTCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCCGAAGACTCGACC 1474655 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||||||||| | || || || || || ||||| Sbjct 1474656 TCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTTACGAAGATCTGCAT 1474702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422259014733776