Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq12 358 6e-94
seq3 120 3e-22
seq33 98.7 9e-16
>seq12
Length=4789767
Score = 358 bits (396), Expect = 6e-94
Identities = 1218/1885 (65%), Gaps = 29/1885 (2%)
Strand=Plus/Plus
Query 22104 TCTTG-TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATG 22162
||||| || || || ||||| |||| || || | || || || || || |||||
Sbjct 3333997 TCTTGGTCAACGGTGAACTGGATGGGCGCAGCCGCTGCTTGAGTACGGAGGTAGTACATT 3334056
Query 22163 CCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTC 22222
|| ||||| ||||| | |||||| || ||||| || || | || || | ||
Sbjct 3334057 CCGGTCTTAAGACCGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTGCCCATAGTC 3334116
Query 22223 GGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCG 22282
|| | ||| | | || || |||||| |||||| || || || || || |||||
Sbjct 3334117 GGGTCTTTCATATGGATGTTCAAGGACTGAGACTGATCAATGAAGGCACCGCGGTCGGCA 3334176
Query 22283 GCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATC 22342
||||| | | | |||||| || |||||||| || |||||||| || ||||
Sbjct 3334177 GCCATCTGGACAACAGTACGCTGTGAGATTTCCCAGACAGTCTTGTAGAGGGCTTTGATA 3334236
Query 22343 TCTAACGGTATCGATTCGA-TCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTT 22401
||| || || | || || | |||||||||| ||||| | ||||| || ||
Sbjct 3334237 TCTGCGGGGAT-GTTTGGAATGTTCTGGACGGAGCCGTTTTCAGCAATGATACGGTTCTT 3334295
Query 22402 AATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCAC 22461
|| | || |||||| || ||| | || ||| || | || | |||| || ||
Sbjct 3334296 CATGGCGTCAGACCACAAGCCCATGTCAACCAGATCCTTTAGGAGCCAAGGGTTGACGAC 3334355
Query 22462 TTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGA 22521
|| |||||||| | | ||| | ||||||||| || ||||||||| |||| || || |
Sbjct 3334356 CTGGAACTCGCCAGCAAGGACTCTGCGTTGGTAGATATTGGATGTGTACGGCTCAAAGCA 3334415
Query 22522 TTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGA 22581
|| ||||| |||| ||||| | || ||||| ||||| || || | || ||
Sbjct 3334416 CTCGTTGTTACCCAAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACTAGCAGACT 3334475
Query 22582 GTTTCTCAAGCCGTGCT--TTGAAATTTTACTC-TTGAGCATCGACCAGTCCCACAGATC 22638
||| | | ||| ||| |||| ||| ||| || ||| | ||||||||| |||||
Sbjct 3334476 GTTGCGAATGCCATGCGCCTTGA---TTTGCTCCTTCAGCGATGCCCAGTCCCAAAGATC 3334532
Query 22639 GGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCC 22698
||| ||| ||||||| |||||| || | |||| | ||| || | || |||
Sbjct 3334533 GGAAGGCTTCACATT---CCACATGTCAAACTGCAGAATGCCTTGAGATACAGGAGAGCC 3334589
Query 22699 TTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCC 22758
|||||| || ||| || || | | |||||| || | || | ||| |
Sbjct 3334590 TTCGTATGTGGAGTATGGGCCTTGCTCCTTGGCAAGCTCCATGGAAGCAGTGAGAGCGGC 3334649
Query 22759 GTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACGCTTTCGT 22814
| || || ||||| || || | |||||||| || || || ||| |||
Sbjct 3334650 ATGGTAAATTGTCTCAAATATCTGCTTGTTCAGCTCTCGTGCCTCAGGAGAC----TCGA 3334705
Query 22815 ACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTC 22874
| |||| || | | |||||| || || | |||||||||||| | ||| || || |
Sbjct 3334706 AAGGCAGGCGAAGGGCTAGGAACGCATCTGCAAGACCCTGAACGCCGACACCAATGGGCC 3334765
Query 22875 GGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTC 22934
|| || || | ||| || || | || || | || ||||| |
Sbjct 3334766 TGTGGCGCATGTTGCTGTTCTGTGCTTCCGGAACGGGGTAGTAGTTGACGTCGATGATCT 3334825
Query 22935 TGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGC 22994
| |||||||||| |||| || || | | ||||| || ||
Sbjct 3334826 TATTCAAGTTTCGAACAACAACTTCGGTAACATCGTGCAGCTTTTGGAAGTCATAGCAGC 3334885
Query 22995 CCG-ATTGTA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCT 23051
| |||||| | ||||| | ||| | ||| || | ||||| ||||| ||||
Sbjct 3334886 CTTCATTGTAGTCCACAAAGGACGGCAAGGCCAGCGAAGCCAAGTTGCAGACGGCGACCT 3334945
Query 23052 CGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCA 23111
| || || |||||| | || || || || |||||| | || ||||| |
Sbjct 3334946 CATCGGGGGCGCAGTACTCGATGATCTCCGTGCAGAGATTGGAGCTGCGGATGGTGCCAA 3335005
Query 23112 AATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCG 23171
||| |||||||||| || |||||||| | ||| |||||||||||| | || | || |
Sbjct 3335006 GATTCTTCTGGTTGCTCTTGCGATTGCAAGCATCTTTGTAGAGCATGAAAGGGTTTCCGG 3335065
Query 23172 TCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGT 23231
| || ||| | ||| | ||| || ||| | |||| || | | ||| ||
Sbjct 3335066 TTTCAGTCTGGGCCTCTAGGATGGCATACCAAAGCTTCTGTGCCTTGATG-GTCTTGCGA 3335124
Query 23232 ACCTGCCTT--CTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTC 23289
||| | |||| || ||||||| ||| | || || || ||| ||||||| |||||
Sbjct 3335125 CCCTTGTTGAGCTTC-TCATACTTTTCGTAGAGAGCCTCGAACTCGTCACCGTAGCAGTC 3335183
Query 23290 GGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTG-AGTCATTTTCAACGC 23348
||||||||||| ||| | |||||||| ||| |||| || | || |||||||| |
Sbjct 3335184 AGCCAGGCCGGGACATTCGTTGGGACACATCAGAGTCCA-ATCGCCGTTCTTTTCAACAC 3335242
Query 23349 GTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCT 23408
| |||| || ||||| || ||||| || ||| ||| || || || ||||| || || |
Sbjct 3335243 GCTTCATGAAGAGATCAGGAATCCACAGGGCGAGGAAGAGATCACGTGCGCGAACTTCTT 3335302
Query 23409 CTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGA 23468
| ||||| ||||||| | |||| || || ||||||||||||||||| ||||| |
Sbjct 3335303 CCTTGCCATGGTTCTTTCGGAGGTCCATGAACTCGAACACGTCCGCATGCCAAGGCTCAA 3335362
Query 23469 GGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGT 23528
|||| | || || ||||| || | ||| ||||| || ||||| || ||||| || ||||
Sbjct 3335363 GGTAGATTGCGAAAGCGCCTGGGCGCTTGTTGCCACCTTGATCCACATAACGAGCAGTGT 3335422
Query 23529 TGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACAC 23588
| ||| | |||| ||||| || | || ||||||||| | ||| |||||| |
Sbjct 3335423 TATTGAAGACTCGCAGCATGGGAATGACACCGTTGGAAGTGCCATTGGTGCCCGCGATGT 3335482
Query 23589 TCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATA 23648
||||| | || || | ||| | || || || || || || || || || |
Sbjct 3335483 ATGAACCGGTGGCACGGATACGGTGGATGTTGAGGCCAATACCACCAGCCATCTTGGAGA 3335542
Query 23649 TCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGA 23708
|||| || || || || |||||||| |||||||| |||||||| || || | |||
Sbjct 3335543 TCATTGCACAGGTCTTGAGGGTGTCGTAAATGCCCTCAATGCTGTCATCCTTCATGTCGA 3335602
Query 23709 CCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGG 23768
| | ||| || ||||||| ||| || | || || | || ||| || || || ||
Sbjct 3335603 CTAGGAAGCATGAAGACAGTTGAGCCTGAGGGGTGCCCGCATTGAAGAGGGTTGGCGAGG 3335662
Query 23769 CGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCT 23828
| || || || | | ||||| | ||||| || || ||| | |||| | |
Sbjct 3335663 CATGTGTGAAAAACTTGCTGGACATCAAGTTGTAGGTTTCAATGACTCGCTCAACATTGT 3335722
Query 23829 CTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGC 23888
|||| ||||||| || || ||||| ||||||| || |||| ||| || | ||
Sbjct 3335723 CTCCCCAGATACCGACAGCAACACGCATGATCATGTGCTGGGGTCGCTCAACGATCTTGC 3335782
Query 23889 CGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAA 23948
| | || ||| | || || || | | | ||||| || || ||||| | ||||| |
Sbjct 3335783 CATCAAGTTTAAGGAGGTAGGATCTCTCTAAAGTTTTGAAACCGAAATATTGGTAGTTGA 3335842
Query 23949 AGTCACGATCGTGCACTATGGCCGA 23973
|||| || || | ||| ||||| ||
Sbjct 3335843 AGTCTCGGTCATACACAATGGCGGA 3335867
>seq3
Length=2371949
Score = 120 bits (132), Expect = 3e-22
Identities = 122/159 (77%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040
|| ||||| |||||||||||||| ||||| || |||||| | || || ||| ||
Sbjct 2245472 GCCTTCGCTGCCGTCGAAGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGTTG 2245413
Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100
||||| || ||||| ||||| || || || || ||||||| | || ||||| ||||||
Sbjct 2245412 AAGAAGCGTGGCCTCATGCCAGGTCTCACATTCTCCAACGAGCTCATCTCGCGAGACGAG 2245353
Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCAC 58139
||||||||||||||||| || || || | | |||||||
Sbjct 2245352 GGTCTCCATACTGATTTCGCCTGTCTCCTATTCTCTCAC 2245314
>seq33
Length=3634720
Score = 98.7 bits (108), Expect = 9e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || ||||| |||||||| |||| ||||| | |||
Sbjct 1474474 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACTCTCGAGGTTGAGTCATCC 1474415
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | || || | || |||||||| ||| | || || ||||||
Sbjct 1474414 GATACCATCGATAACGTAAAGTCCAAGATTCAAGACAAGGAGGGCATCCCACCAGACCAG 1474355
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || ||||| ||||| |||||||| ||| | || | || || |||
Sbjct 1474354 CAGCGACTCATCTTCGCGGGCAAGCAGTTGGAGGACGGTCGAACGCTCTCGGACTACAAC 1474295
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || || || || ||||| || ||
Sbjct 1474294 ATTCAGAAGGAGTCTACCCTCCATCTCGTCCT 1474263
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||||||||| || || ||||| || |||||| | || || || | ||
Sbjct 1474702 ATGCAGATCTTCGTAAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCTTCG 1474643
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | ||||| || || ||||||||| || | || || ||||||
Sbjct 1474642 GATACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAG 1474583
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| | || ||||| ||||| ||| | || || || | ||| || |||
Sbjct 1474582 CAGCGATTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGAACCCTCTCCGACTACAAC 1474523
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || ||||| |||||||| |||| || |||| | || ||||
Sbjct 1474522 ATCCAGAAGGAATCTACTCTTCACTTGGTTCTCCGACTCCGTGGTGGTA 1474474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766199405120
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