Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq12 95.1 2e-14
>seq12
Length=4789767
Score = 95.1 bits (104), Expect = 2e-14
Identities = 184/268 (69%), Gaps = 8/268 (3%)
Strand=Plus/Plus
Query 94779 GTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATA 94838
|| || ||| | || ||||| |||||||||| ||||| ||| || || || ||
Sbjct 3335511 GTTGAGGCCAATACCACCAGCCATCTTGGAGATCATTGCACAGGTCTTGAGGGTGTCGTA 3335570
Query 94839 AATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG-GGGTG 94897
||| ||||||||||| ||||| | | | | | |||||||| || || ||||| | ||
Sbjct 3335571 AATGCCCTCAATGCTGTCATCCTTCATGTCGACTAGGAAGCATGAAGACAGTTGAGCCTG 3335630
Query 94898 TGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGA 94957
| || || ||| || || || || || ||||| || ||| | | || ||||| |
Sbjct 3335631 AG-GGGTGCCCGCATTGAAGAGGGTTGGCGAGGCATGTGTGAAAAACTTGCTGGACATCA 3335689
Query 94958 GATCATATGTTTCAATGACAGATTTGA---TGTCTGATCCGTGAATGCCGACAGCCACAC 95014
| || ||||||||||| | | |||| ||| || |||||||| ||||
Sbjct 3335690 AGTTGTAGGTTTCAATGACTCGCTCAACATTGTC---TCCCCAGATACCGACAGCAACAC 3335746
Query 95015 GCATAATCATGTCCTGAGGGCGCTCAAC 95042
|||| ||||||| ||| || ||||||||
Sbjct 3335747 GCATGATCATGTGCTGGGGTCGCTCAAC 3335774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583543554380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |