Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02- 10] 36 sequences; 42,868,360 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq12 95.1 2e-14 >seq12 Length=4789767 Score = 95.1 bits (104), Expect = 2e-14 Identities = 184/268 (69%), Gaps = 8/268 (3%) Strand=Plus/Plus Query 94779 GTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATA 94838 || || ||| | || ||||| |||||||||| ||||| ||| || || || || Sbjct 3335511 GTTGAGGCCAATACCACCAGCCATCTTGGAGATCATTGCACAGGTCTTGAGGGTGTCGTA 3335570 Query 94839 AATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG-GGGTG 94897 ||| ||||||||||| ||||| | | | | | |||||||| || || ||||| | || Sbjct 3335571 AATGCCCTCAATGCTGTCATCCTTCATGTCGACTAGGAAGCATGAAGACAGTTGAGCCTG 3335630 Query 94898 TGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGA 94957 | || || ||| || || || || || ||||| || ||| | | || ||||| | Sbjct 3335631 AG-GGGTGCCCGCATTGAAGAGGGTTGGCGAGGCATGTGTGAAAAACTTGCTGGACATCA 3335689 Query 94958 GATCATATGTTTCAATGACAGATTTGA---TGTCTGATCCGTGAATGCCGACAGCCACAC 95014 | || ||||||||||| | | |||| ||| || |||||||| |||| Sbjct 3335690 AGTTGTAGGTTTCAATGACTCGCTCAACATTGTC---TCCCCAGATACCGACAGCAACAC 3335746 Query 95015 GCATAATCATGTCCTGAGGGCGCTCAAC 95042 |||| ||||||| ||| || |||||||| Sbjct 3335747 GCATGATCATGTGCTGGGGTCGCTCAAC 3335774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583543554380