Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq12 275 9e-69
seq3 109 8e-19
>seq12
Length=4789767
Score = 275 bits (304), Expect = 9e-69
Identities = 1198/1873 (64%), Gaps = 33/1873 (2%)
Strand=Plus/Plus
Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777
||||| || ||||| || | || | || ||||| || ||||||||||| || || |||
Sbjct 3334009 GTGAACTGGATGGGCGCAGCCGCTGCTTGAGTACGGAGGTAGTACATTCCGGTCTTAAGA 3334068
Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837
||||| |||| ||| ||||||||| || || | ||| | |||| ||| |||
Sbjct 3334069 CCGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTGCCCATAGTCGGGTCTTTCATA 3334128
Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897
||||| |||| || ||| ||||| |||||||| || | ||| |||||||| | |
Sbjct 3334129 TGGATGTTCAAGGACTGAGACTGATCAATGAAGGCACCGCGGTCGGCAGCCATCTGGACA 3334188
Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957
| || |||| |||||||| | ||| || || | || |||||| | || | |
Sbjct 3334189 ACAGTACGCTGTGAGATTTCCCAGACAGTCTTGTAGAGGGCTTTGATATCTGCGGGGATG 3334248
Query 78958 TTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014
|||| | ||||| | ||| || || || || || | ||||| || | ||| |
Sbjct 3334249 TTTGGAATGTTCTGGACGGAGCCGTTTTCAGCAATGATACGGTTCTTCATGGCGTCAGAC 3334308
Query 79015 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 79074
|| || | || | | | | ||||| || || || || || || || |||
Sbjct 3334309 CACAAGCCCATGTCAACCAGATCCTTTAGGAGCCAAGGGTTGACGACCTGGAACTCGCCA 3334368
Query 79075 GACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCC 79134
| | ||||| || ||| ||||| || || || || | | || || || |||
Sbjct 3334369 GCAAGGACTCTGCGTTGGTAGATATTGGATGTGTACGGCTCAAAGCACTCGTTGTTACCC 3334428
Query 79135 AAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 79194
|| || || | ||| || || ||||| ||||| || | | ||| || | || ||
Sbjct 3334429 AAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACTAGCAGACTGTTGCGAATGCCA 3334488
Query 79195 TATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTC 79254
| | |||||| || || || ||| |||| ||||||||||| || || ||||||
Sbjct 3334489 TGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCCAAAGATCGGAAGGCTTCACATTC 3334548
Query 79255 CAAAGATCATATTGTAGAATACCGTTAC-TAGCGTATGATCCTGTGTATGTTTCATAAGG 79313
|| | ||| | || ||||| || | | || | | || ||| |||||| || ||
Sbjct 3334549 CACATGTCAAACTGCAGAATGCCTTGAGATACAGGA-GAGCCTTCGTATGTGGAGTATGG 3334607
Query 79314 TCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAA 79373
|||| || | ||| | || || | || | | ||||| || || ||
Sbjct 3334608 GCCTTGCTCCTTGGCAAGCTCCATGGAAGCAGTGAGAGCGGCATGGTAAATTGTCTCAAA 3334667
Query 79374 AATCTTCTTATTGAGATCTTGTGCTTCTAGGCTA-TCAAATGGATAATTTAAGAGA-ATA 79431
|||| ||| || || ||| |||| || ||| | || || || | ||| | |
Sbjct 3334668 TATCTGCTTGTTCAGCTCTCGTGCCTC-AGGAGACTCGAAAGGC-AGGCGAAGGGCTAGG 3334725
Query 79432 AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATT 79491
||||| ||||| | || ||||| || | ||| || || || || | | | || |
Sbjct 3334726 AACGCATCTGCAAGACCCTGAACGCCGACACCAATGGGCCTGTGGCGCATGTTGCTGTTC 3334785
Query 79492 TCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATT 79551
| ||||| |||| || || || || | || || || ||||| | || | || |
Sbjct 3334786 TGTGCTTCCGGAACGGGGTAGTAGTTGACGTCGATGATCTTATTCAAGTTTCGAACAACA 3334845
Query 79552 ACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATC----TATTACAAACAT 79607
|||| | ||||| | || || | || ||| | | || || || | || | |
Sbjct 3334846 ACTTCGGTAACATCGTGCAGCTTTTGGAAGTCATAGCAGCCTTCATTGTAGTCCACAAAG 3334905
Query 79608 GTT--CAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTG 79664
| ||| || | || |||| || || ||||| ||||||| | | ||| || |
Sbjct 3334906 GACGGCAAGGCCAGCGAAGCCAAGTTGCAGACGGCGACCTCATCGGGGGC-GCAGTACTC 3334964
Query 79665 TATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTT 79724
|| || || |||||||| || | ||||| || | ||| | || || |||||
Sbjct 3334965 GATGATCTCCGTGCAGAGATTGGAGCTGCGGATGGTGCCAAGATTCTTCTGGTTGCTCTT 3335024
Query 79725 TTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTAT 79784
|| || ||||| || || || ||||| || | || |||||| |||| | ||||
Sbjct 3335025 GCGATTGCAAGCATCTTTGTAGAGCATGAAAGGGTTTCCGGTTTCAGTCTGGGCCTCTAG 3335084
Query 79785 AATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGACTTGTATCTCTTTTCT--CTT-T 79840
|| || | ||| | | || | ||||| || | |||| | ||| | ||| |
Sbjct 3335085 GATGGCATACCAAA-GCTTCTGTGCCTTGATGGT---CTTGCGACCCTTGTTGAGCTTCT 3335140
Query 79841 CGTATTGT--GTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACA 79898
| || | | ||| | | | ||||||||||| || | || | | || |||||
Sbjct 3335141 CATACTTTTCGTAGAGAGCC--TCGAACTCGTCACCGTAGCAGTCAGCCAGGCCGGGACA 3335198
Query 79899 TTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTT--ACTCGTTTCATAAAGAGA 79956
||||| |||||||||| | ||| || || | || ||| || || ||||| ||||||
Sbjct 3335199 TTCGTTGGGACACATCAGAGTCCAATCGCCGT--TCTTTTCAACACGCTTCATGAAGAGA 3335256
Query 79957 TCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTC 80016
||||||||||| || || | || ||||| | | | | || || || || |||
Sbjct 3335257 TCAGGAATCCACAGGGCGAGGAAGAGATCACGTGCGCGAACTTCTTCCTTGCCATGGTTC 3335316
Query 80017 TTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATA 80076
||| || || | |||| | | | || | |||||| || || | ||| || || | |
Sbjct 3335317 TTTCGGAGGTCCATGAACTCGAACACGTCCGCATGCCAAGGCTCAAGGTAGATTGCGAAA 3335376
Query 80077 ACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 80136
| || || || ||||| || || ||||| | || | ||| |||||||| | |||| |
Sbjct 3335377 GCGCCTGGGCGCTTGTTGCCACCTTGATCCACATAACGAGCAGTGTTATTGAAGACTCGC 3335436
Query 80137 AACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCA 80196
| ||| ||||| | ||| ||||| || |||||||| || | ||| || || |||||
Sbjct 3335437 AGCATGGGAATGACACCGTTGGAAGTGCCATTGGTGCCCGCGATGTATGAACCGGTGGCA 3335496
Query 80197 CGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT 80256
|| ||| || || || || || || ||||| || ||||| | ||| ||
Sbjct 3335497 CGGATACGGTGGATGTTGAGGCCAATACCACCAGCCATCTTGGAGATCATTGCACAGGTC 3335556
Query 80257 TTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTA 80316
|| | || || || |||||||| ||||| ||||| |||||| | ||| || || |
Sbjct 3335557 TTGAGGGTGTCGTAAATGCCCTCAATGCTGTCATCCTTCATGTCGACTAGGAAGCATGAA 3335616
Query 80317 GACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCAT 80376
|||| ||| || || |||||||| || | ||| || || || || || || |
Sbjct 3335617 GACAGTTGAGCCTGAGGGGTGCCCGCATTGAAGAGGGTTGGCGAGGCATGTGTGAAAAAC 3335676
Query 80377 TTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCT 80436
|| |||| | ||||| || ||||| || || | || | || ||
Sbjct 3335677 TTGCTGGACATCAAGTTGTAGGTTTCAATGACTCGCTCAACATTGTCTCCCCAGATACCG 3335736
Query 80437 ACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAAC 80496
|| || |||||||| | ||||||||| |||| |||||||||||| || | ||| |
Sbjct 3335737 ACAGCAACACGCATGATCATGTGCTGGGGTCGCTCAACGATCTTGCCATCAAGTTTAAGG 3335796
Query 80497 AAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAA 80556
| ||| ||| | || |||||||| ||||| ||||| | ||| |||||||| || ||
Sbjct 3335797 AGGTAGGATCTCTCTAAAGTTTTGAAACCGAAATATTGGTAGTTGAAGTCTCGGTCATAC 3335856
Query 80557 ATAATAACCGAGT 80569
| ||| | ||||
Sbjct 3335857 ACAATGGCGGAGT 3335869
>seq3
Length=2371949
Score = 109 bits (120), Expect = 8e-19
Identities = 114/150 (76%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018
||| |||||||| || ||||||||||||| || || |||||||| || |||||
Sbjct 2245329 ACAGGCGAAATCAGTATGGAGACCCTCGTCTCGCGAGATGAGCTCGTTGGAGAATGTGAG 2245388
Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078
|| ||||| ||||||||||| || | ||| || ||||| ||||| | || |||||
Sbjct 2245389 ACCTGGCATGAGGCCACGCTTCTTCAACCAGAAGATGGAAGCAAAGGCACCGCTGAAGAA 2245448
Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAG 50108
||| ||||| || || || |||||||||||
Sbjct 2245449 GATACCTTCGACGGCAGCGAAGGCAACAAG 2245478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268476779040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |