Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq12 260 2e-64
seq3 100 4e-16
>seq12
Length=4789767
Score = 260 bits (288), Expect = 2e-64
Identities = 1188/1866 (64%), Gaps = 35/1866 (2%)
Strand=Plus/Plus
Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860
|| ||||| ||||| | | || |||| ||||| || |||||||| || || || |||
Sbjct 3334009 GTGAACTGGATGGGCGCAGCCGCTGCTTGAGTACGGAGGTAGTACATTCCGGTCTTAAGA 3334068
Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCGGCTAT 70919
||||| |||| ||| |||||||| || || | ||| |||| | || || ||
Sbjct 3334069 CCGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTGCCCATAG-TCGGGTCTTTCAT 3334127
Query 70920 GTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 70979
|| || |||| |||||| ||||| |||||||| || | ||| |||||||| | |
Sbjct 3334128 ATGGATGTTCAAGGACTGAGACTGATCAATGAAGGCACCGCGGTCGGCAGCCATCTGGAC 3334187
Query 70980 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 71039
| || |||| |||||||| | ||| || || | || |||||| | || |
Sbjct 3334188 AACAGTACGCTGTGAGATTTCCCAGACAGTCTTGTAGAGGGCTTTGATATCTGCGGGGAT 3334247
Query 71040 GTTTGTA---TTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATT 71096
||||| | ||||| | ||| || || ||||| || | || || || | |||
Sbjct 3334248 GTTTGGAATGTTCTGGACGGAGCCGTTTTCAGCAATGATACGGTTCTTCATGGCGTCAGA 3334307
Query 71097 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCC 71156
||| || | || | | | | ||||| ||| || || || || || || ||
Sbjct 3334308 CCACAAGCCCATGTCAACCAGATCCTTTAGGAGCCAAGGGTTGACGACCTGGAACTCGCC 3334367
Query 71157 AGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCC 71216
|| | ||||| || ||| ||||| || ||||| || | |||| || || ||
Sbjct 3334368 AGCAAGGACTCTGCGTTGGTAGATATTGGATGTGTACGGCTCAAAGCACTCGTTGTTACC 3334427
Query 71217 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACC 71276
||| || || | ||| || || ||||| ||||| || | ||||| || | || ||
Sbjct 3334428 CAAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACTAGCAGACTGTTGCGAATGCC 3334487
Query 71277 ATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACAACNNN 71336
||| | ||||| || || || ||| |||| | ||||||||| || || ||
Sbjct 3334488 ATGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCCAAAGATCGGAAGGCTTCACATT 3334547
Query 71337 NNNNNNNNNNNNNNNNNNNATGCCGTTAC-TAGCGTATGATCCTGCATATGTATCGTATG 71395
||||| | | || | | || ||| | ||||| |||||
Sbjct 3334548 CCACATGTCAAACTGCAGAATGCCTTGAGATACAGGA-GAGCCTTCGTATGTGGAGTATG 3334606
Query 71396 GTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGA 71455
| |||| | | ||| || || || | || ||| ||||| || || |
Sbjct 3334607 GGCCTTGCTCCTTGGCAAGCTCCATGGAAGCAGTGAGAGCGGCATGGTAAATTGTCTCAA 3334666
Query 71456 AAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGA-ATA 71514
| |||| ||| || || ||| |||| || || || || || | ||| | |
Sbjct 3334667 ATATCTGCTTGTTCAGCTCTCGTGCCTCAGGAGACTCGAAAGGC-AGGCGAAGGGCTAGG 3334725
Query 71515 AACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATT 71574
||||| ||||| | || |||||||| | ||| || || ||||| | | | || |
Sbjct 3334726 AACGCATCTGCAAGACCCTGAACGCCGACACCAATGGGCCTGTGGCGCATGTTGCTGTTC 3334785
Query 71575 TCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATT 71634
| ||||| |||| || || || || | || || || ||||| | |||| || |
Sbjct 3334786 TGTGCTTCCGGAACGGGGTAGTAGTTGACGTCGATGATCTTATTCAAGTTTCGAACAACA 3334845
Query 71635 ACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCATC----TATT--ACAAAC 71688
|||| | ||||| | || || | || ||| | | || || || | |||||
Sbjct 3334846 ACTTCGGTAACATCGTGCAGCTTTTGGAAGTCATAGCAGCCTTCATTGTAGTCCACAAAG 3334905
Query 71689 -ACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTG 71747
||| |||||| | || |||| || || ||||| ||||||| | || || |
Sbjct 3334906 GACGG-CAAGGCCAGCGAAGCCAAGTTGCAGACGGCGACCTCATCGGGGGCGCAGTACTC 3334964
Query 71748 TATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTT 71807
|| || || ||||| ||||| | |||||| || | ||| | || || |||||
Sbjct 3334965 GATGATCTCCGTGCAGAGATTGGAGCTGCGGATGGTGCCAAGATTCTTCTGGTTGCTCTT 3335024
Query 71808 TTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTAT 71867
|| || ||||| || || || || || || | || |||||| |||| | ||||
Sbjct 3335025 GCGATTGCAAGCATCTTTGTAGAGCATGAAAGGGTTTCCGGTTTCAGTCTGGGCCTCTAG 3335084
Query 71868 AATCGCTTTCCAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTTTTCT--CTT-T 71923
|| || | ||| | | || | ||||| || | |||| | ||| | ||| |
Sbjct 3335085 GATGGCATACCAAA-GCTTCTGTGCCTTGATGGT---CTTGCGACCCTTGTTGAGCTTCT 3335140
Query 71924 CGTATTGT--GTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGT-CTAATCCAGGAC 71980
| || | | ||| | | | ||||||||||| || | ||| | | | || ||||
Sbjct 3335141 CATACTTTTCGTAGAGAGCC--TCGAACTCGTCACCGTA-GCAGTCAGCCAGGCCGGGAC 3335197
Query 71981 ATTCATTCGGACACATCAATGACCACTCTCCATCATCATTT--ACTCGTTTCATAAAGAG 72038
|||| || |||||||||| | ||| || || | || ||| || || ||||| |||||
Sbjct 3335198 ATTCGTTGGGACACATCAGAGTCCAATCGCCGT--TCTTTTCAACACGCTTCATGAAGAG 3335255
Query 72039 ATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATT 72098
|||||||||||| || || | || ||||| | | | | || || || || ||
Sbjct 3335256 ATCAGGAATCCACAGGGCGAGGAAGAGATCACGTGCGCGAACTTCTTCCTTGCCATGGTT 3335315
Query 72099 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 72158
|||| || || | |||| | | | || | |||||| || || | ||| || || |
Sbjct 3335316 CTTTCGGAGGTCCATGAACTCGAACACGTCCGCATGCCAAGGCTCAAGGTAGATTGCGAA 3335375
Query 72159 AACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 72218
| | || || || ||||| || || ||||| | || | ||| |||||||| | ||||
Sbjct 3335376 AGCGCCTGGGCGCTTGTTGCCACCTTGATCCACATAACGAGCAGTGTTATTGAAGACTCG 3335435
Query 72219 CAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGC 72278
|| ||| ||||| | ||| ||||| | |||||||| || | ||| || || ||||
Sbjct 3335436 CAGCATGGGAATGACACCGTTGGAAGTGCCATTGGTGCCCGCGATGTATGAACCGGTGGC 3335495
Query 72279 ACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 72338
||| ||| | || || || || || || ||||| || ||||| | ||| ||
Sbjct 3335496 ACGGATACGGTGGATGTTGAGGCCAATACCACCAGCCATCTTGGAGATCATTGCACAGGT 3335555
Query 72339 TTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 72398
|| | || || || |||||||| || || |||||| |||||| | ||| || ||
Sbjct 3335556 CTTGAGGGTGTCGTAAATGCCCTCAATGCTGTCATCCTTCATGTCGACTAGGAAGCATGA 3335615
Query 72399 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 72458
||||| ||| || || |||||||| || | ||| || || || || || || |
Sbjct 3335616 AGACAGTTGAGCCTGAGGGGTGCCCGCATTGAAGAGGGTTGGCGAGGCATGTGTGAAAAA 3335675
Query 72459 TTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCC 72518
|| |||| | ||||| || ||||| || || | || | || ||
Sbjct 3335676 CTTGCTGGACATCAAGTTGTAGGTTTCAATGACTCGCTCAACATTGTCTCCCCAGATACC 3335735
Query 72519 TACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAA 72578
|| || |||||||| | ||| ||||| |||| |||||||||||| || | ||| |
Sbjct 3335736 GACAGCAACACGCATGATCATGTGCTGGGGTCGCTCAACGATCTTGCCATCAAGTTTAAG 3335795
Query 72579 CAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 72638
| ||||||| | || |||||||| ||||| ||||| | ||| |||||||| || ||
Sbjct 3335796 GAGGTAGGATCTCTCTAAAGTTTTGAAACCGAAATATTGGTAGTTGAAGTCTCGGTCATA 3335855
Query 72639 AATAAT 72644
| |||
Sbjct 3335856 CACAAT 3335861
>seq3
Length=2371949
Score = 100 bits (110), Expect = 4e-16
Identities = 293/444 (66%), Gaps = 8/444 (2%)
Strand=Plus/Plus
Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833
|| ||||| || | || || || ||||| || || ||||| || | | || || ||
Sbjct 2245039 TTCTGGTAATCGGCGACTCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGAGAGATGTTC 2245098
Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAA-AT 41892
|||||||| || || || |||| || ||||| | || | | |||| || |
Sbjct 2245099 TCCATGAAGTCGAAGGGGTTGGACACCTTATATACCTTCTCGT-TGCCAAGAGCGACCAG 2245157
Query 41893 CAATCTATCTGCGATGAATTCTATATATGTTTTCATCATT-TCACAATTCATTCCTATAA 41951
| || ||| || | ||| || ||||| ||||||| || | ||||| || | ||
Sbjct 2245158 GAGTCGATCGGCAACGAACTCGATATACTGCTTCATCAGGGTCGCG-TTCATGCCAAGAA 2245216
Query 41952 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 42011
| | ||| |||||| | || || || ||||| ||||| ||| ||||| ||||
Sbjct 2245217 GACCACATGGCAGAGCCTCGGTCAGGAACTCTTGCTCAATTTTGACAGCGTCAACGATAA 2245276
Query 42012 TAGATCTT--ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 42069
| || | || || || || ||| ||| | || || || | | ||| ||
Sbjct 2245277 CA--TCCTGGACCACTTGTTTGCTTGGTCGATTCCTCAAGTGAGAGAATAGGAGACAGGC 2245334
Query 42070 GAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 42129
|||||| || |||||||| |||| || | |||||||| || ||||| || ||
Sbjct 2245335 GAAATCAGTATGGAGACCCTCGTCTCGCGAGATGAGCTCGTTGGAGAATGTGAGACCTGG 2245394
Query 42130 CATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCC 42189
||| ||||||||||| || | ||| || || || ||||| | || |||||||| ||
Sbjct 2245395 CATGAGGCCACGCTTCTTCAACCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGATACC 2245454
Query 42190 TTCTACTGCCGCAAAGGCAATAAG 42213
||| || || || ||||||| |||
Sbjct 2245455 TTCGACGGCAGCGAAGGCAACAAG 2245478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138897987360
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