Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02- 10] 36 sequences; 42,868,360 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq33 100 3e-16 >seq33 Length=3634720 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014 ||||| || || | ||| | ||||| || | ||||| || || || |||||||| ||| Sbjct 1474017 TGGCCGCCGCGCAGACGGAGGACTAAGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCG 1474076 Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074 |||| |||| |||||| || || |||||||| |||| ||||||||||| || || Sbjct 1474077 CTCAGGGTGCGACCGTCTTCCAGCTGCTTACCAGCGAAGATAAGACGTTGCTGGTCTGGT 1474136 Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134 || || || || || || ||| || |||| | || | ||||| | | ||| Sbjct 1474137 GGGATACCCTCCTTATCCTGAATCTTGGACTTTACGTTGTCGATTGTGTCAGACGACTCT 1474196 Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| | || | ||||| ||||| | || || ||||| || ||||| Sbjct 1474197 ACTTCCAACGTAATGGTCTTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 1474246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507014171843520