Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02- 10] 36 sequences; 42,868,360 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq1 122 7e-23 >seq1 Length=5257612 Score = 122 bits (134), Expect = 7e-23 Identities = 129/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 5582 CGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCG 5641 ||||| ||| ||||||||||| || |||||| ||| ||||||||||| | | || Sbjct 3254649 CGCTCAATGATAAGCTGCGCTATGCGATCGCCCTCCTTGACCTCGAAATCCGACTCGGCG 3254708 Query 5642 AAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCC 5701 ||| || || | || ||| | |||||||||||| ||||| || ||||| ||||| Sbjct 3254709 TGGTTAAAGAGTAGGACTTTCACCTGGCCGCGGTAGTCTGCGTCGATGACGCCAGCGCCA 3254768 Query 5702 ACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCC 5751 ||||||||||||||| |||||||||||||| ||||| | |||||| Sbjct 3254769 GTGTCGATGAAGTGCTTAGATGCCAGGCCGGAGCGCGGAGCGATGCGGCC 3254818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430054211313632