Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq12 410 3e-109
>seq12
Length=4789767
Score = 410 bits (454), Expect = 3e-109
Identities = 1175/1785 (66%), Gaps = 30/1785 (2%)
Strand=Plus/Minus
Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGA 363449
|||||| | || || | |||| ||||||||| | | |||| | || |||||
Sbjct 3335829 TTTCGGTTTCAAAACTTTAGAGAGATCCTACCTCCTTAAACTTGATGGCAAGATCGTTGA 3335770
Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509
|| || ||||| ||| | |||||||||||| | |||||| | |||||||
Sbjct 3335769 GCGACCCCAGCACATGATCATGCGTGTTGCTGTCGGTATCTGGGGAGACAATGTTGAGCG 3335710
Query 363510 CGCGATTGAAACATATAAGCTTCTAAGT---GCTCGTGTATTCACGCACGCCACGCCAAC 363566
| |||||||| || || ||| | || || || | ||||| || ||| |||||||
Sbjct 3335709 AGTCATTGAAACCTACAA-CTTG-ATGTCCAGCAAGTTT-TTCACACATGCCTCGCCAAC 3335653
Query 363567 AATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAA 363626
| | |||||| || || | | | | || ||||||| ||||| || | | |||||
Sbjct 3335652 CCTCTTCAATGCGGGCACCCCTCAGGCTCAACTGTCTTCATGCTTCCTAGTCGACATGAA 3335593
Query 363627 GGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAA 363686
||| || ||| ||||| || | ||||| || |||| ||||| | || |||||||
Sbjct 3335592 GGATGACAGCATTGAGGGCATTTACGACACCCTCAAGACCTGTGCAATGATCTCCAAGAT 3335533
Query 363687 TGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA--CAGAACAGTTACATTCGC 363744
|| || || ||||| | |||||| | | ||||| | | || ||||| |||
Sbjct 3335532 GGCTGGTGGTATTGGCCTCAACATCCACCGTATCCGTGCCACCGGTTCA--TACAT-CGC 3335476
Query 363745 GG-CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803
|| ||| || || || || | |||||||||| || || || | || |||||
Sbjct 3335475 GGGCACCAATGGCACTTCCAACGGTGTCATTCCCATGCTGCGAGTCTTCAATAACACTGC 3335416
Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863
| || || || || ||||| |||||| ||| || || || || || || |||||
Sbjct 3335415 TCGTTATGTGGATCAAGGTGGCAACAAGCGCCCAGGCGCTTTCGCAATCTACCTTGAGCC 3335356
Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923
| ||||| || | || ||||| | || ||||| || ||| || || || ||| |
Sbjct 3335355 TTGGCATGCGGACGTGTTCGAGTTCATGGACCTCCGAAAGAACCATGGCAAGGAAGAAGT 3335296
Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983
|| ||||||||||| ||| || || ||| || |||| | || |||||||| || ||
Sbjct 3335295 TCGCGCACGTGATCTCTTCCTCGCCCTGTGGATTCCTGATCTCTTCATGAAGCGTGTTGA 3335236
Query 363984 GGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTA 364041
| | | | ||||| | || | || || |||||||||| || || | ||
Sbjct 3335235 A--AAGAACGGCGATTGGACTCTGATGTGTCCCAACGAATGTCCCGGCCTGGCTGACTGC 3335178
Query 364042 TGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG 364101
| |||||||| | | ||||| |||||||||||||| | |||| ||| |||
Sbjct 3335177 TACGGTGACGAGTTCGAGGCTCTCTACGAAAAGTATGAGAAGCTCAACAAGGGTCGCAAG 3335118
Query 364102 ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACA 364161
|| || ||||||||||| |||| ||||||| | || | |||| ||| || |||| |
Sbjct 3335117 ACCATCAAGGCACAGAAGCTTTGGTATGCCATCCTAGAGGCCCAGACTGAAACCGGAA-A 3335059
Query 364162 CCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTAC 364220
|||| | ||| | ||||||||| | ||||| |||||| ||||||| || | ||||| ||
Sbjct 3335058 CCCTTTCATGCTCTACAAAGATGCTTGCAATCGCAAGAGCAACCAGAAGAATCTTGGCAC 3334999
Query 364221 AATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279
| || |||| ||| || || || ||||| || || ||| ||| ||||| ||| |
Sbjct 3334998 CA-TCCGCAGCTCCAATCTCTGCACGGAGATCATCGAGTACTGCGCCCCCGATGAGGTCG 3334940
Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT------AAAAGATGGTACTT 364333
|||| || ||| | || ||| | || | ||| | ||||| || || || |
Sbjct 3334939 CCGTCTGCAACTTGGCTTCGCTGGCCTTGCCGTCCTTTGTGGACTACAATGAAGGCTGCT 3334880
Query 364334 TTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTA 364393
|||| ||| | || | || || ||| | || | | | || | | ||| | |
Sbjct 3334879 ATGACTTCCAAAAGCTGCACGATGTTACCGAAGTTGTTGTTCGAAACTTGAATAAGATCA 3334820
Query 364394 TCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGA 364453
||||| || || || || |||| ||||| || || ||||| || | || |
Sbjct 3334819 TCGACGTCAACTACTACCCCGTTCCGGAAGCACAGAACAGCAACATGCGCCACAGGCCCA 3334760
Query 364454 TTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATT 364513
||||| | || || ||||| || || || | || | || || | || || |
Sbjct 3334759 TTGGTGTCGGCGTTCAGGGTCTTGCAGATGCGTTCCTAGCCCTTCGCCTGCCTTTCGAGT 3334700
Query 364514 CGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGA 364573
| ||||| || || | || || ||| |||| ||||| ||||| || |||||| | |
Sbjct 3334699 CTCCTGAGGCACGAGAGCTGAACAAGCAGATATTTGAGACAATTTACCATGCCGCTCTCA 3334640
Query 364574 CTGCTT-CGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCT 364632
|||||| | || ||| ||| | ||||| | ||||| || || || || || |||
Sbjct 3334639 CTGCTTCCATGGAGCTTGCCAAGGAGCAAGGCCCA-TACTCCACATACGAAGGCTCTCCT 3334581
Query 364633 CTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAAC 364692
| || || || | | |||||||| | |||||||| | ||| || | | ||| ||
Sbjct 3334580 GTATCTCAAGGCATTCTGCAGTTTGACATGTGGAATGTGAAGCCTTCCGATCTTTGGGAC 3334521
Query 364693 TGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGC 364751
|||| |||| | | ||| | ||| |||||| | ||||||| || | |||
Sbjct 3334520 TGGGCATCGCTGAAGGAGCAA-ATCAAGGCGCATGGCATTCGCAACAGTCTGCTAGTAGC 3334462
Query 364752 GCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTT 364811
|| ||||| || || |||| | |||||| | || |||||||||||||| || ||||
Sbjct 3334461 ACCAATGCCTACCGCCAGTACTTCCCAGATCTTGGGTAACAACGAGTGCTTTGAGCCGTA 3334402
Query 364812 TACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTA 364871
||| |||| | || |||| | || ||| | || || || | ||| || || |
Sbjct 3334401 CACATCCAATATCTACCAACGCAGAGTCCTTGCTGGCGAGTTCCAGGTCGTCAACCCTTG 3334342
Query 364872 CCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCAT 364931
|| | |||||||| ||| || ||||| |||| |||||||||| ||||||
Sbjct 3334341 GCTCCTAAAGGATCTGGTTGACATGGGCTTGTGGTCTGACGCCATGAAGAACCGTATCAT 3334282
Query 364932 CGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTA 364991
|| | || || || || |||||||||||| | || | |||| | || | | ||
Sbjct 3334281 TGCTGAAAACGGCTCCGTCCAGAACATTCCAAACATCCCCGCAGATATCAAAGCCCTCTA 3334222
Query 364992 CAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGC 365051
||| || || |||||||| || ||| ||| | | | ||||| ||||| ||||||||
Sbjct 3334221 CAAGACTGTCTGGGAAATCTCACAGCGTACTGTTGTCCAGATGGCTGCCGACCGCGGTGC 3334162
Query 365052 TTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCT 365111
|| || |||| ||||| || ||| | |||| | || || | |||| |
Sbjct 3334161 CTTCATTGATCAGTCTCAGTCCTTGAACATCCATATGAAAGACCCGACTATGGGCAAGAT 3334102
Query 365112 TACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
|| |||||||||| ||| ||||| |||||||||||| ||
Sbjct 3334101 CACCAGCATGCATTTCGCCGGCTGGAAGCTCGGTCTTAAGACCGG 3334057
Score = 87.8 bits (96), Expect = 5e-12
Identities = 127/177 (72%), Gaps = 2/177 (1%)
Strand=Plus/Plus
Query 111732 TGCCAAATGTATCAGCGAT-CTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAG 111790
|| ||| |||||||||||| |||| ||||| |||||||| ||||| || |||||||||||
Sbjct 3896830 TGTCAATTGTATCAGCGATCCTGC-GATATGGGTCTTGGCGTTCCATTCAATATTGCAAG 3896888
Query 111791 TTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCAT 111850
||||||||||| || | | ||||||| || |||| || || | |
Sbjct 3896889 CTACGCACTACTGACACACATGCTCGCTCACGTTTGCGATCTGGTGCCTGGAAGCCTTAC 3896948
Query 111851 TCACGTTATCGGAGATGCGCATGTTTACACAAACCACATTGATGCACTTAAAACACA 111907
||||| || ||||| ||||| || || | ||||| | ||||| || || || ||
Sbjct 3896949 ACACGTCATGGGAGACGCGCACGTCTATATCGACCACGTCGATGCTCTAAAGACCCA 3897005
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303352998828152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |