Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02- 10] 36 sequences; 42,868,360 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq12 152 5e-32 seq35 136 4e-27 seq33 131 2e-25 >seq12 Length=4789767 Score = 152 bits (168), Expect = 5e-32 Identities = 729/1137 (64%), Gaps = 55/1137 (5%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| |||||||| || | || | || || | || || ||| | || Sbjct 3334348 TTGACGACCTGGAACTCGCCAGCAAGGACTCTGCGTTGGTAGATATTGGATGTGTACGGC 3334407 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| ||||||| || |||| ||| || | || | ||||| ||||| || || Sbjct 3334408 TCAAAGCACTCGTTGTTACCCAAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACT 3334467 Query 145178 A--ATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCC 145235 | | | || ||||| | ||| ||| |||||| | ||||| |||| |||| |||| Sbjct 3334468 AGCAGACTG--TTGCGAATGCCATGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCC 3334525 Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295 | || | ||| |||| | ||||||||| |||||| |||||| | | || Sbjct 3334526 AAAGATCGGAAGGCTTCACATTCCACATGTCAAACTGCAGAATGCCTTGAGATACAGGAG 3334585 Query 145296 TGCCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTC---GCAACTCGCCTC 145350 ||||| | | ||| || || | | ||||| ||||| | || || Sbjct 3334586 AGCCTTCGTATGTGGAGTA--TGGGCCTTGCTCCTTGGCAAGCTCCATGGAA---GCAGT 3334640 Query 145351 CAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCT 145410 |||||| | ||||||||||| || ||| |||| ||| || ||| Sbjct 3334641 GAGAGCGGCATGGTAAATTGTCTCAAATATCTGCTTGTTCAGCTCTCGTGCCTCAGGAGA 3334700 Query 145411 CTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGAT 145470 |||| | |||| ||| || || || ||||| || || ||||| | || || || || Sbjct 3334701 CTCGAAAGGCAGGCGAAGGGCTAGGAACGCATCTGCAAGACCCTGAACGCCGACACCAAT 3334760 Query 145471 GGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA-TCGATTACGGTCGA 145529 ||||| || ||||||||| || || | | || || | | | ||| |||| Sbjct 3334761 GGGCCTGTGGCGCATGTTGCTGTTCTGTGCTTCCGGAACGGGGTAGTAGTTGACG-TCGA 3334819 Query 145530 TAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAA 145589 | || |||||||||||||| || || || | |||| | ||| ||||| |||||| Sbjct 3334820 TGATCTTATTCAAGTTTCGAACAACAACTTCGGTAACATCGTGCAGCTTTTGGAAGTCAT 3334879 Query 145590 ACCGAGCCT-CGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACT 145648 | | ||||| | | | ||||| || | ||| | ||| ||||| || || || Sbjct 3334880 AGC-AGCCTTCATTGTAGTCCACAAAGGACGGCAAGGCCAGCGAAGCCAAGTTGCAGACG 3334938 Query 145649 GCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATG 145708 || ||| |||| | ||| ||| | | |||||| | ||| | |||| | |||| Sbjct 3334939 GCGACCTCATCGGGGGCGCAGTACTCGATGATCTCCGTGCAGAGATTGGAGCTGCGGATG 3334998 Query 145709 GTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGT 145768 || || ||||| | ||| || || || | ||||| || || |||||||||||| | || Sbjct 3334999 GTGCCAAGATTCTTCTGGTTGCTCTTGCGATTGCAAGCATCTTTGTAGAGCATGAAAGGG 3335058 Query 145769 CCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGC--AAG-TCCTGCGCACGCACC 145825 || || || ||| | ||| | ||| | | | ||| | ||| || | Sbjct 3335059 TTTCCGGTTTCAGTCTGGGCCTCTAGGATGGCA---TACCAAAGCTTCTGTGC-----CT 3335110 Query 145826 TGCTGCTGGTAGCGGCCCT-------CTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGC 145878 || || | | ||| |||| ||||| | || || |||||| |||| ||| | Sbjct 3335111 TGATGGTCTT-GCGACCCTTGTTGAGCTTCT-CATACTTTTCGTAGAGAGCCTCGAACTC 3335168 Query 145879 GGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCC 145938 | ||||||||| || | |||||||||||| | ||||||||||||||| | ||| |||| Sbjct 3335169 GTCACCGTAGCAGTCAGCCAGGCCGGGACATTCGTTGGGACACATCAGAGTCCAATCGCC 3335228 Query 145939 GTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCG-----TACATCAAG 145993 ||| | || |||| ||| || | ||| || | |||||| ||| | |||| | Sbjct 3335229 GTTCTTTTCAACACGCTTCATGAAGAGATCAGGAATCCACAGGGCGAGGAAGAGATCACG 3335288 Query 145994 TCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATT--AAGCACACTATAGA 146051 | ||||| | | |||| ||||| ||| | | | | | || | | | | Sbjct 3335289 T-GCGCGAACTTC-TTCCT----TGCCATGGTTCTTTCGGAGGTCCATGAACTCGA-ACA 3335341 Query 146052 TGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCT 146108 |||||| ||||| || |||| |||| |||| || ||| || |||||||| | Sbjct 3335342 CGTCCGCATGCCAAGGCTCAAGGTAGATTGCGAAAGCGCCTGGGCGCTTGTTGCCACCTT 3335401 Query 146109 GGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGG 146165 | ||||| | ||| | |||| || ||||| |||| |||||| ||| ||| ||| Sbjct 3335402 GATCCACATAACGAGCAGTGTTATTGAAGACTCGCAGCATGGGAATGACACCGTTGG 3335458 >seq35 Length=2560152 Score = 136 bits (150), Expect = 4e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||||||||| | || | ||||||||||| |||||||||||||| Sbjct 153106 GCCTCCTCGTAGACGCAGCACCAGGTGCAAAGTCGACTCCTTCTGAATGTTGTAATCAGA 153165 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || |||||| ||||||||||| ||| |||| || ||||| ||||| || || Sbjct 153166 TAGGGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGCGG 153225 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 153226 GATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCAC 153285 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 |||| ||| | || || || || || ||||| ||||| |||||||||| Sbjct 153286 CTCGAGGGTGATAGTCTTCCCCGTAAGGGTTTTGACGAAGATCTGCATGA 153335 >seq33 Length=3634720 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || || || | || || ||||| || |||||||| ||| Sbjct 1474476 CCACCACGGAGTCGGAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAG 1474535 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||||||||| ||| |||| || ||||||||||| || ||| Sbjct 1474536 AGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGG 1474595 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| ||| ||||| | || | ||||| | ||||||| Sbjct 1474596 ATTCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCCGAAGACTCGACC 1474655 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| || || |||||||| |||||||| Sbjct 1474656 TCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTTACGAAGATCTGCAT 1474702 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | || || || | ||| | ||| |||||||| ||||||||||| || Sbjct 1474247 GCCACCACGAAGGCGGAGGACGAGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCCGA 1474306 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || |||||| | ||||||||| ||| |||| | ||||||||||| || || Sbjct 1474307 GAGCGTTCGACCGTCCTCCAACTGCTTGCCCGCGAAGATGAGTCGCTGCTGGTCTGGTGG 1474366 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| || || ||| | | || | ||||||| ||||| | Sbjct 1474367 GATGCCCTCCTTGTCTTGAATCTTGGACTTTACGTTATCGATGGTATCGGATGACTCAAC 1474426 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| || || || ||||| |||||||| Sbjct 1474427 CTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1474474 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | ||| | ||| |||||||| || |||||||| ||| Sbjct 1474704 CCGCCACGAAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1474763 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||||||||| || |||| | ||||||||||| || || Sbjct 1474764 AGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGGGGA 1474823 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| ||| ||||| | || | |||||| | ||||| | Sbjct 1474824 ATTCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATAGTATCCGAAGACTCCACC 1474883 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | ||| | ||| || || || Sbjct 1474884 TCAAGGGTGATGGTCTTTCCAGT 1474906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012587594240