Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq2 87.8 4e-12
>seq2
Length=5100555
Score = 87.8 bits (96), Expect = 4e-12
Identities = 144/201 (72%), Gaps = 10/201 (5%)
Strand=Plus/Plus
Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760
||||||| ||||| || ||||| || || |||||| ||||| |||| || ||
Sbjct 4126498 CTCACTCCCGCATGCGTGGTCTGTCCGGTGGCCAGCGTGTCAAGGTTGTTCTCTCGGCTT 4126557
Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820
|||| |||||||| || ||| ||||||| ||||||||||||||||| ||||| || ||
Sbjct 4126558 GCTC-GTGGCAACGACCCCACTTGATCGTCCTCGACGAGCCTACCAATTATCTCGATCGT 4126616
Query 280821 GAGAGCCTGGGCGCTCT---GAGTGCTGCTCTGGACACATTT-GGCGGCGGCGTCGTAGT 280876
|| || || ||||| | || |||| ||| |||| | || || ||| | |
Sbjct 4126617 GACTCGCTCGGTGCTCTCTCCAAGGC-GCTCAGGA---ATTTCGAGGGTGGTGTCATCAT 4126672
Query 280877 CATTTCTCACAGCACAGAATT 280897
|||| |||||||| | || ||
Sbjct 4126673 CATTACTCACAGCGCGGAGTT 4126693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027836325910276
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |