Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02- 10] 36 sequences; 42,868,360 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 4e-12 >seq2 Length=5100555 Score = 87.8 bits (96), Expect = 4e-12 Identities = 144/201 (72%), Gaps = 10/201 (5%) Strand=Plus/Plus Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760 ||||||| ||||| || ||||| || || |||||| ||||| |||| || || Sbjct 4126498 CTCACTCCCGCATGCGTGGTCTGTCCGGTGGCCAGCGTGTCAAGGTTGTTCTCTCGGCTT 4126557 Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820 |||| |||||||| || ||| ||||||| ||||||||||||||||| ||||| || || Sbjct 4126558 GCTC-GTGGCAACGACCCCACTTGATCGTCCTCGACGAGCCTACCAATTATCTCGATCGT 4126616 Query 280821 GAGAGCCTGGGCGCTCT---GAGTGCTGCTCTGGACACATTT-GGCGGCGGCGTCGTAGT 280876 || || || ||||| | || |||| ||| |||| | || || ||| | | Sbjct 4126617 GACTCGCTCGGTGCTCTCTCCAAGGC-GCTCAGGA---ATTTCGAGGGTGGTGTCATCAT 4126672 Query 280877 CATTTCTCACAGCACAGAATT 280897 |||| |||||||| | || || Sbjct 4126673 CATTACTCACAGCGCGGAGTT 4126693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836325910276