Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq12 266 6e-66
seq3 158 2e-33
>seq12
Length=4789767
Score = 266 bits (294), Expect = 6e-66
Identities = 1094/1703 (64%), Gaps = 69/1703 (4%)
Strand=Plus/Plus
Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796
||| ||||||||| ||| || | || || | || | ||||||||||| ||||||||
Sbjct 3334006 ACGGTGAACTGGATGGGCGCAGCCGCTGCTTGAGTACGGAGGTAGTACATTCCGGTCTTA 3334065
Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856
|| || |||| || || |||||| || | ||| ||| || | |||
Sbjct 3334066 AGACCGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTGCCCAT----AG--TCGGG 3334119
Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916
|| | | | | || ||| | |||||| ||| || | ||||| | || ||
Sbjct 3334120 TCTTTC------ATATGGATGTTCAAGGACTGAGACTGATCAATGAAGGCACCGCGGTCG 3334173
Query 243917 GCGGCCAT--GGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCT 243974
|| ||||| || | || | | |||||| || || || |||||||||| || |
Sbjct 3334174 GCAGCCATCTGGACAACAGTACGCTGTGAGATTTCCCAGACA--GTCTTGTAGAGGGCTT 3334231
Query 243975 TGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGG 244034
||| | |||||| | |||||||| || ||||| || | | |||| ||
Sbjct 3334232 TGATATCTGCGGGGATGTTTGGAATGTTCTGGACGGAGCCGTTTTCAGCAATGATACGGT 3334291
Query 244035 TGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCT---GT 244091
| |||| || ||||| ||||| | |||| ||| | || ||| ||
Sbjct 3334292 TCTTCATGGCGTCAGACCACAAGCCCATGTCAACCAGATCCTTTA---GGAGCCAAGGGT 3334348
Query 244092 TCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCT 244151
| || ||||| ||||| || | || || | ||| ||||||| ||| || |||||
Sbjct 3334349 TGACGACCTGGAACTCGCCAGCAAGGACTCTGCGTTGGTAGATATTGGATGTGTACGGCT 3334408
Query 244152 CGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCA 244211
| | || ||| |||| |||| ||||| | || || || || ||||| || | || |
Sbjct 3334409 CAAAGCACTCGTTGTTACCCAAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACTA 3334468
Query 244212 GCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACA 244271
|||||||||| | | ||| ||| || ||| | | ||| ||||||||| |
Sbjct 3334469 GCAGACTGTTGCGAATGCCATGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCCAAA 3334528
Query 244272 TGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGA 244331
| || ||| | || | || |||||||||||||||||| | || | |
Sbjct 3334529 GATCGGA-AGG-CTTCACATT-------CCACATGTCAAACTGCAGAATGCCTTGAGATA 3334579
Query 244332 CGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGT 244391
| || ||| ||||| || | ||| || || | || ||| |||| | |
Sbjct 3334580 CAGGAGAGCCTTCGTATGTGGAGTATGGGCCTTGCTCCTTGGCAAGCTCCATGGAAGCAG 3334639
Query 244392 CGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGC 244451
||| ||||| | ||| || ||||| || ||| |||||||| || || |||| | |
Sbjct 3334640 TGAGAGCGGCATGGTAAATTGTCTCAAATATCTGCTTGTTCAGCTCTCGTGCCT--CAGG 3334697
Query 244452 AGGT--GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCC 244509
|| ||| || | || | | ||| | || || || ||||| ||||||| ||
Sbjct 3334698 AGACTCGAAAGGCAGGCGAAGGGCTAGGAACGCATCTGCAAGACCCTGAACGCCGACACC 3334757
Query 244510 GATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTC 244569
||||| ||||| ||| ||||| | | ||||| || |||||||| ||||| ||||
Sbjct 3334758 AATGGGCCTGTGGCGCATGTTGCTGTTCTGTGCTTCCGGAACGGGGTAGTAGTTGACGTC 3334817
Query 244570 GATCACCTTGTTGAGGTTGCGGGTGATCA-TGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628
||| | ||| || | ||| || | | | ||| || ||| |||| || ||||
Sbjct 3334818 GATGATCTTATTCAAGTTTCGAACAACAACTTCGGTA-ACATCGTGCAGCTTTTGGAAGT 3334876
Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGG 244688
| || | | ||| || || ||| || || || ||| | || |
Sbjct 3334877 CATA-------GCAGCCTTC---ATTGTAGTCCACA-AAGGACGGCAAGGCCAGCGAAG- 3334924
Query 244689 CCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGT 244748
||| |||||||||||| ||||| || | | | ||||| || ||||| |||||||| |
Sbjct 3334925 CCAAGTTGCAGACGGCGACCTCATCGGGGGCGCAGTACTCGATGATCTCCGTGCAGAGAT 3334984
Query 244749 TACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGT 244808
| || ||||||||| || | || || ||| |||| ||||| || || ||||
Sbjct 3334985 TGGAGCTGCGGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGATTGCAAGCATCTTTGT 3335044
Query 244809 AGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCC 244868
|||||||||| || ||||| || |||||| | |||| | | ||| || | |
Sbjct 3335045 AGAGCATGAAAGGGTTTCCGGTTTCAGTCTGGGCCTCTAGGATGGCATACCAAAGCTTCT 3335104
Query 244869 TAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGC--CTCGTAGCGGGTGTACAGGGCCTC 244926
||||||| ||| ||||| ||||| | || ||| || ||| || |||||
Sbjct 3335105 GTGCCTTGATGGTCTTGCGACCCTTG--TTGAGCTTCTCATACTTTTCGTAGAGAGCCTC 3335162
Query 244927 GAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGG-CACATGAGACTCC 244985
||||||| || || || | |||||||| || || ||| ||||| ||| |||
Sbjct 3335163 GAACTCGTCACCGTAGCAGTCAGCCAGGCCGGGACA-TTCGTTGGGACACATCAGAGTCC 3335221
Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045
| |||||| | | || | || ||||||||| || || ||||| ||||| ||||||
Sbjct 3335222 AATCGCCGTTCTTTTCAACACGCTTCATGAAGAGATCAGGAATCCACAGGGCGAGGAAGA 3335281
Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105
| || | | | || ||| |||| |||||| | || |||| || || || |
Sbjct 3335282 GATCACGTGCGCGAACTTCTTCCTTGCCATGGTTCTTTCGGAGGTCCATGAACTCGAACA 3335341
Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165
|||| | ||||| ||||| | ||||| |||| ||||| || ||||||||||| || |
Sbjct 3335342 CGTCCGCATGCCAAGGCTCAAGGTAGATTGCGAAAGCGCCTGGGCGCTTGTTGCCACCTT 3335401
Query 245166 GGTCCACCATCCTCTCGAGC-GCG---TTGAAGATGCGCAGGGTAGGCACTATGCCGTTA 245221
| |||| | | ||||| | | ||||||| ||||| | || | | |||||
Sbjct 3335402 GATCCA----CATAACGAGCAGTGTTATTGAAGACTCGCAGCATGGGAATGACACCGTTG 3335457
Query 245222 GAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGA---GGTTGCTGATGGAC 245278
|| ||| ||||||||| |||||| | || || | | || ||| | || ||
Sbjct 3335458 GAAGTGCCATTGGTGCCCGCGATGTATGAACCGGTGGCACGGATACGGTGGATGTTG--- 3335514
Query 245279 ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATG 245338
| ||| | || || || ||||||||| | || ||| |||||| |||||| |||
Sbjct 3335515 AGGCCAATACCACCAGCCATCTTGGAGATCATTGCACAGGTCTTGAGGGTGTCGTAAATG 3335574
Query 245339 CCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGG 245398
||||| |||||||| |||||||| || || ||||| || ||||| || | || |||
Sbjct 3335575 CCCTCAATGCTGTCATCCTTCATGTCGACTAGGAAGCATGAAGACAGTTGAGCCTGAGGG 3335634
Query 245399 CTGCACGAGTTGAACAGAGTGGG 245421
||| || ||||| || || ||
Sbjct 3335635 GTGCCCGCATTGAAGAGGGTTGG 3335657
>seq3
Length=2371949
Score = 158 bits (174), Expect = 2e-33
Identities = 311/446 (70%), Gaps = 13/446 (3%)
Strand=Plus/Minus
Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764
|| || ||||| | |||||||| || ||||||||| || ||||| || |||||||||
Sbjct 2245478 CTTGTTGCCTTCGCTGCCGTCGAAGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTC 2245419
Query 42765 TGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAG 42823
||| | ||| || || || ||||| || ||||| ||||| ||||| |||||| |
Sbjct 2245418 TGGTTGAAGAAGCGTGGCCTC-ATGCCAGGTCTCACATTCTCCAACGAGCTCATCTCGCG 2245360
Query 42824 GGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCA-CA 42882
|||||||| || |||| || || ||||| ||||| ||||| ||| | ||| | |
Sbjct 2245359 AGACGAGGGTCTCCATACTGATTTCGCCTGTCTCCTATTCTC---TCACTTGAGGAATCG 2245303
Query 42883 AGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGT 42942
| | | || || ||||| || | ||| || || || | || ||| | ||||
Sbjct 2245302 ACCAAGCAAACAAG-TGGTCCAGGATGTTATCGTTGACGCTGTCAAAATTGAGCAAGAGT 2245244
Query 42943 TCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCACGA-CCTCATGTGCAA 43000
|||| || || | ||||| ||| || | |||||||| | ||| ||| ||| |
Sbjct 2245243 TCCTGACCGAGGCTCTGCCATGTG-GTCTTCTTGGCATGAA-CGCGACCCTGATGAAGCA 2245186
Query 43001 GTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACA 43059
||| ||| ||| ||| ||||| | ||||| || | ||| || | | || |
Sbjct 2245185 GTATATCGAGTTCGTTGCCGATCGACTCCTGGTCGCTCTTGGCAACGAGAAG-GTATATA 2245127
Query 43060 ACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTT 43119
| | | |||||||||||| |||||||||||||| | | |||||||||||||| |
Sbjct 2245126 AGGTGTCCAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGCGGCAAGACCAACTTCT 2245067
Query 43120 TCGAGAAGCGCGTCGCCGACTACCAG 43145
|||||||||| |||||||| ||||||
Sbjct 2245066 TCGAGAAGCGAGTCGCCGATTACCAG 2245041
Score = 127 bits (140), Expect = 4e-24
Identities = 179/249 (72%), Gaps = 3/249 (1%)
Strand=Plus/Minus
Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368
|||||||||||||| | ||| ||||||||| ||||||||||| ||| |||||||
Sbjct 2245933 ATGTACAAGAAGGCCGAAGCGTCCTTCTGGACCGCTGAGGAGATTGATCTGTCCAAGGAT 2245874
Query 42369 ACGGCCGGCTGGGAGT-CACTGTCTGAGA--ACGAAAAGTTTTTCCTCAAAAACATACTG 42425
|| ||| | || || || |||| || | ||| || | |||| ||
Sbjct 2245873 CTTCACGATTGGAACAACAAGATCAACGACGACGAGAAATACTTCATCTCACACATTTTG 2245814
Query 42426 GCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAA 42485
|||||||||||||| ||||| ||||| ||||| ||||| || | | || |||| |
Sbjct 2245813 GCCTTCTTCGCCGCGTCTGATGGCATCGTCAACGAGAATCTCGTCGAGAGATTCAGCAGC 2245754
Query 42486 GAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTG 42545
||||| ||| | |||||| ||||||||||||||||||||||| || |||||| |
Sbjct 2245753 GAGGTCCAGATCCCTGAGGCTCGCTGCTTCTACGGCTTCCAGATTATGATGGAGAACATC 2245694
Query 42546 CACTCTGAG 42554
||||| |||
Sbjct 2245693 CACTCGGAG 2245685
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944338775047360
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