Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02- 10] 36 sequences; 42,868,360 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq12 168 8e-37 seq3 109 7e-19 >seq12 Length=4789767 Score = 168 bits (186), Expect = 8e-37 Identities = 1170/1863 (63%), Gaps = 71/1863 (4%) Strand=Plus/Plus Query 113558 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 113617 |||| | ||||||| ||||| ||| || | | |||||||||||||| || ||| Sbjct 3334003 TCAACGGTGAACTGGATGGGCGCAGCCGCTGCTTGAGTACGGAGGTAGTACATTCCGGTC 3334062 Query 113618 TTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTT 113677 || || || |||||||| | | |||||| || | |||| | || || | Sbjct 3334063 TTAAGACCGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTGCCCATAGTCGGGTCT 3334122 Query 113678 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATA 113737 | ||| || ||||| || || ||||| |||||| || || || || ||||| Sbjct 3334123 TTCATATGGATGTTCAAGGACTGAGACTGATCAATGAAGGCACCGCGGTCGGCAGCCATC 3334182 Query 113738 TCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCT 113797 | | ||| | ||||||||| ||||| |||||||| || ||||| | Sbjct 3334183 TGGACAACAGTACGCTGTGAGATTTCCCAGACAGTCTTGTAGAGGGCTTTGATATCTGCG 3334242 Query 113798 GGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCA-TGAGA---TCCTTCAT 113853 ||||| | || || |||| |||||| | || | || ||| | | |||||| Sbjct 3334243 GGGATGTTTGGAATGTTCTGGACGGAGCC----GTTTTCAGCAATGATACGGTTCTTCAT 3334298 Query 113854 ATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAAC 113913 | | ||||| | || || | ||||||| | ||| ||||| || Sbjct 3334299 GGCGTCAGACCACAAGCCCATGTCAACCAGATCCTTTAGGAGCCAAGGGTTGACGACCTG 3334358 Query 113914 AAACTCACCCGCGAGGG---TGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCA 113970 ||||| || || ||| ||||| | |||||||||| ||||| ||||||||||| Sbjct 3334359 GAACTCGCCAGCAAGGACTCTGCGTT---GGTAGATATTGGATGTGTACGGCTCAAAGCA 3334415 Query 113971 CTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCT 114030 ||| |||||||||||||| |||| || ||| || ||||| ||||| | || || || Sbjct 3334416 CTCGTTGTTACCCAAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACTAGCAGACT 3334475 Query 114031 GTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGC-T 114089 ||| || | || | || | || | ||||| || | ||||||| | || | Sbjct 3334476 GTTGCGAATGCCATGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCCA-AAGATCGG 3334534 Query 114090 TTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAA 114149 | || | | | |||||| |||||||| || || ||||| || | || || || || Sbjct 3334535 AAGGCTTCACATTCCACATGTCAAACTGCAGAATGCCTTGAGATACAGGAGAGCCTTCGT 3334594 Query 114150 ATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGAT 114209 |||| ||||||||| | ||| || | || | || ||| || || || | Sbjct 3334595 ATGTGGAGTATGGGCCTTGCTCCTTGGCAAGCTCCATGGAAGCAGTGAGAGCGGCATGGT 3334654 Query 114210 ACATTGTCTCAAAAATGCGAGCATTCATTGC-CTTG-GCCTCGTCGGAATCAAACGCGAG 114267 | ||||||||||| || | |||| || || | ||||| || || || | || Sbjct 3334655 AAATTGTCTCAAATATCTGCTTGTTCA--GCTCTCGTGCCTCAGGAGACTCGAAAGGCAG 3334712 Query 114268 TCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCT 114327 || | || |||| || ||||| || || |||| ||||| || | || | Sbjct 3334713 GCGAAGGGCTAGGAACGCATCTGCAAGACCCTGAACGCCGACACCAATGGGCCTGTGGCG 3334772 Query 114328 CATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAG 114387 ||| || || | || | ||||| || | || ||||| | | |||| | Sbjct 3334773 CATGTTGCTGTTCTGTGCTTCCGGAACGGGGTAGTAGTTGACGTCGATGATCTTATTCAA 3334832 Query 114388 ATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC 114447 ||| ||||| | || | || || ||||||| | | ||| | | || | Sbjct 3334833 GTTTCGAACAACAACTTCGGTAACATCGTGCAGCTTTTGGAAGTCATAGCAGC------C 3334886 Query 114448 TTCATTG------ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 114501 ||||||| ||| | || | ||| | || |||| || || || | | ||| Sbjct 3334887 TTCATTGTAGTCCACAAAGGACGGCAAGGCCAGCGAAGCCAAGTTGCAGACGGCGACCTC 3334946 Query 114502 ATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAA 114561 ||| | |||||| || || ||||| || | ||| || || |||||||| | Sbjct 3334947 ATCGGGGGCGCAGTACTCGATGATCTCCGTGCAGAGATTGGAGCTGCGGATGGTGCCAAG 3335006 Query 114562 GTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGT 114621 ||||| || || ||| || || ||||| ||||| |||||| | || | || || Sbjct 3335007 ATTCTTCTGGTTGCTCTTGCGATTGCAAGCATCTTTGTAGAGCATGAAAGGGTTTCCGGT 3335066 Query 114622 CTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGG 114680 || || |||| || || || || | ||| | | || | | || | ||| ||| Sbjct 3335067 TTCAGTCTGGGCCTCTAGGATGGCATACCAAAGCTTCTGTGCCTTG----ATGGTCTTG- 3335121 Query 114681 CTCGCCCCT------CCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGG 114734 || |||| || ||| |||||| |||||| || || ||||| ||||| | Sbjct 3335122 --CGACCCTTGTTGAGCTTCTCATACTTTTCGTAGAGAGCCTCGAACTCGTCACCGTAGC 3335179 Query 114735 CCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAAGAGAGACCATTGACCACCCTCCTCA 114793 || | || || || | || |||| || | |||| ||| | || || ||| Sbjct 3335180 AGTCAGCCAGGCC-GGGACATTCGTTGGGACACATCAGAGTCCAATCGCCGTTCTTTTCA 3335238 Query 114794 ACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCT 114853 ||||||||||||||||| || || ||||| || || ||||||||| || |||| || Sbjct 3335239 ACACGCTTCATGAAGAGATCAGGAATCCACAGGGCGAGGAAGAGATCACGTGCGCGAACT 3335298 Query 114854 TCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGT 114913 ||||| | || || || || | |||| || || | | ||||| ||||| || Sbjct 3335299 TCTTCCTTGCCATGGTTCTTTCGGAGGTCCATGAACTCGAACACGTCCGCATGCCAAGGC 3335358 Query 114914 TCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTC 114967 || ||||| | |||| | | ||| | || ||| | || | ||||| | Sbjct 3335359 TCAAGGTAGATTGCGAAAG-CGCCT--GGGCGCTTGTTGCCACCTTGATCCACATAACGA 3335415 Query 114968 GCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCC 115026 || ||| ||| || || || ||||| ||||||| ||| | || |||||| || ||| Sbjct 3335416 GCAGTGTTATTGAAGACTCGCAGCATGGGAATGACACCGTTGGAAGTGCCATTGGTGCCC 3335475 Query 115027 CCGA-ATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCC 115085 ||| || || || |||| | || | ||||||| | |||||||| || ||| Sbjct 3335476 GCGATGTATGA-AC-CGGTGGCACGGATACGGTGGATGTTGAGGCCAATACCACCAGCCA 3335533 Query 115086 ACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCT 115145 ||| ||||| || || | |||| || |||| || || || || |||| ||| Sbjct 3335534 TCTTGGAGATCATTGCACAGGTCTTGAGGGTGTCGTAAATGCCCTCAATGCTGTCATCCT 3335593 Query 115146 TATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGG 115205 | | ||| |||||||| |||| ||| | | || || || || |||||||||| Sbjct 3335594 TCATGTCGACTAGGAAGCATGAAGACAGTTGAGCCTGAGGGGTGCCCGCATTGAAGAGGG 3335653 Query 115206 TTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGAC--- 115260 |||| | || || ||| | | |||| ||||||| | |||||| || | ||| Sbjct 3335654 TTGGCGAGGCATGTGTGA--AAAACTTGCTGGACATCAAGTTGTAGGTTTCAATGACTCG 3335711 Query 115261 GGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGT 115320 | | ||||| ||| | ||||||| | || ||||| | ||||| |||||| Sbjct 3335712 CTCAACATTGTCTCCCCAG---ATACCGACAGCAACACGCATGATCATGTGCTGGGGTCG 3335768 Query 115321 TTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAA 115380 || | | | ||||| || | ||||||| |||| || || |||| ||| || Sbjct 3335769 CTCAACGATCTTGCCATCAAGTTTAAGGAGGTAGGATCTCTCTAAAGTTTTGAAACCGAA 3335828 Query 115381 ATA 115383 ||| Sbjct 3335829 ATA 3335831 >seq3 Length=2371949 Score = 109 bits (120), Expect = 7e-19 Identities = 113/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 126059 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCC 126118 |||||||||||||| || |||||||| || || ||||| || ||||||||||| || Sbjct 2245345 TGGAGACCCTCGTCTCGCGAGATGAGCTCGTTGGAGAATGTGAGACCTGGCATGAGGCCA 2245404 Query 126119 CGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACAC 126178 ||||||||||||||||| || | | ||| | ||| ||||||||| || || || Sbjct 2245405 CGCTTCTTCAACCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGATACCTTCGACGGCA 2245464 Query 126179 GCGAACGCAAAGAGACGCTCAGCAAAGG 126206 ||||| |||| ||||| | ||| |||| Sbjct 2245465 GCGAAGGCAACAAGACGTTGAGCGAAGG 2245492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353331190880