Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq33 95.1 1e-14
seq35 89.7 5e-13
>seq33
Length=3634720
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | || || || || ||||||||||| || | || || || ||||
Sbjct 1474263 AGGACGAGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTTCGACCGTCC 1474322
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| | ||||||||| || | ||||| ||||||||||| || || || || || || |||
Sbjct 1474323 TCCAACTGCTTGCCCGCGAAGATGAGTCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCT 1474382
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || |||||| || | ||||| | || || || | ||| | |||
Sbjct 1474383 TGAATCTTGGACTTTACGTTATCGATGGTATCGGATGACTCAACCTCGAGAGTGATCGTC 1474442
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||||| | || || ||||| || |||||
Sbjct 1474443 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1474474
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || ||||| || || |||||||| || | || ||| || | || || ||||||
Sbjct 1474500 TGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGC 1474559
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|||||||| | || | ||||||||||| || || ||||| || || || || || ||
Sbjct 1474560 TTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGGATCTTC 1474619
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||| || || | ||||| | || || || | || | ||||||||||||
Sbjct 1474620 GACTTGACGTTGTCGATGGTATCCGAAGACTCGACCTCAAGGGTGATGGTCTTGCCGGTG 1474679
Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443
| || |||||||| || |||||
Sbjct 1474680 AGGGTCTTTACGAAGATCTGCAT 1474702
Score = 89.7 bits (98), Expect = 5e-13
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
|||||| || | | || || ||||||| || || || || || |||||||| || |
Sbjct 1474703 ACCGCCACGAAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1474762
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| ||| || | || || ||||||||||| ||| | || || ||||||||||| || ||
Sbjct 1474763 GAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGGGG 1474822
Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359
|||||| || || || || || ||
Sbjct 1474823 AATTCCCTCCTTGTCCTGGATCTT 1474846
>seq35
Length=2560152
Score = 89.7 bits (98), Expect = 5e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | ||||| || || |||||||||||||| | | ||| || ||||
Sbjct 153122 AGCACCAGGTGCAAAGTCGACTCCTTCTGAATGTTGTAATCAGATAGGGTTCGGCCGTCC 153181
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||||||||| | || | ||||| ||||| || || || || || || |||
Sbjct 153182 TCGAGCTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGCGGGATGCCCTCCTTGTCT 153241
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | || || | ||||| || | || | |||
Sbjct 153242 TGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTC 153301
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || || | ||||| ||||| || |||||
Sbjct 153302 TTCCCCGTAAGGGTTTTGACGAAGATCTGCAT 153333
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644575159840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |