Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq12 167 3e-36
seq3 105 8e-18
>seq12
Length=4789767
Score = 167 bits (184), Expect = 3e-36
Identities = 1167/1860 (63%), Gaps = 65/1860 (3%)
Strand=Plus/Plus
Query 115519 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 115578
|||| | ||||||| ||||| ||| || | | |||||||||||||| || |||
Sbjct 3334003 TCAACGGTGAACTGGATGGGCGCAGCCGCTGCTTGAGTACGGAGGTAGTACATTCCGGTC 3334062
Query 115579 TTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTT 115638
|| || || |||||||| | | |||||| || | |||| | || || |
Sbjct 3334063 TTAAGACCGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTGCCCATAGTCGGGTCT 3334122
Query 115639 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATA 115698
| ||| || ||||| || || ||||| |||||| || || || || |||||
Sbjct 3334123 TTCATATGGATGTTCAAGGACTGAGACTGATCAATGAAGGCACCGCGGTCGGCAGCCATC 3334182
Query 115699 TCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCT 115758
| | ||| | ||||||||| ||||| |||||||| || ||||| |
Sbjct 3334183 TGGACAACAGTACGCTGTGAGATTTCCCAGACAGTCTTGTAGAGGGCTTTGATATCTGCG 3334242
Query 115759 GGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCA-TGAGA---TCCTTCAT 115814
||||| | || || |||| ||||| | || | || ||| | | ||||||
Sbjct 3334243 GGGATGTTTGGAATGTTCTGGACGGAGCC----GTTTTCAGCAATGATACGGTTCTTCAT 3334298
Query 115815 ATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAAC 115874
| | ||||| | || || | ||||||| | ||| ||||| ||
Sbjct 3334299 GGCGTCAGACCACAAGCCCATGTCAACCAGATCCTTTAGGAGCCAAGGGTTGACGACCTG 3334358
Query 115875 AAACTCACCCGCGAGGG---TGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCA 115931
||||| || || ||| ||||| | ||||| |||| ||||| |||||||||||
Sbjct 3334359 GAACTCGCCAGCAAGGACTCTGCGTT---GGTAGATATTGGATGTGTACGGCTCAAAGCA 3334415
Query 115932 CTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCT 115991
||| |||||||||||||| |||| || ||| || ||||| ||||| | || || ||
Sbjct 3334416 CTCGTTGTTACCCAAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACTAGCAGACT 3334475
Query 115992 GTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGC-T 116050
|||||| | || | || | || | ||||| || | ||||||| | || |
Sbjct 3334476 GTTGCGAATGCCATGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCCA-AAGATCGG 3334534
Query 116051 TTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAA 116110
| || | | | |||||| |||||||| || || ||||| || | || || || ||
Sbjct 3334535 AAGGCTTCACATTCCACATGTCAAACTGCAGAATGCCTTGAGATACAGGAGAGCCTTCGT 3334594
Query 116111 ATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGAT 116170
|||| |||||||| | ||| || | || | || ||| || || || |
Sbjct 3334595 ATGTGGAGTATGGGCCTTGCTCCTTGGCAAGCTCCATGGAAGCAGTGAGAGCGGCATGGT 3334654
Query 116171 ACATTGTCTCAAAAATGCGAGCATTCATTGC-CTTG-GCCTCGTCGGAATCAAACGCGAG 116228
| ||||||||||| || | |||| || || | ||||| || || || | ||
Sbjct 3334655 AAATTGTCTCAAATATCTGCTTGTTCA--GCTCTCGTGCCTCAGGAGACTCGAAAGGCAG 3334712
Query 116229 ACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCT 116288
|| | || |||| || ||||| || || |||| ||||| || | || |
Sbjct 3334713 GCGAAGGGCTAGGAACGCATCTGCAAGACCCTGAACGCCGACACCAATGGGCCTGTGGCG 3334772
Query 116289 CATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAG 116348
||| || || | || | ||||| || | || ||||| | | |||| |
Sbjct 3334773 CATGTTGCTGTTCTGTGCTTCCGGAACGGGGTAGTAGTTGACGTCGATGATCTTATTCAA 3334832
Query 116349 ATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC 116408
||| ||||| | || | || || ||||||| | | ||| | | || |
Sbjct 3334833 GTTTCGAACAACAACTTCGGTAACATCGTGCAGCTTTTGGAAGTCATAGCAGC------C 3334886
Query 116409 TTCATTG------ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 116462
||||||| ||| | || | ||| | || |||| || || || | | |||
Sbjct 3334887 TTCATTGTAGTCCACAAAGGACGGCAAGGCCAGCGAAGCCAAGTTGCAGACGGCGACCTC 3334946
Query 116463 ATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAA 116522
||| | |||||| || || ||||| || | ||| || || |||||||| |
Sbjct 3334947 ATCGGGGGCGCAGTACTCGATGATCTCCGTGCAGAGATTGGAGCTGCGGATGGTGCCAAG 3335006
Query 116523 GTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGT 116582
||||| || || ||| || || ||||| ||||||||||| | || | || ||
Sbjct 3335007 ATTCTTCTGGTTGCTCTTGCGATTGCAAGCATCTTTGTAGAGCATGAAAGGGTTTCCGGT 3335066
Query 116583 CTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGG 116641
|| || |||| || || || || | ||| | | || | | || | ||| |||
Sbjct 3335067 TTCAGTCTGGGCCTCTAGGATGGCATACCAAAGCTTCTGTGCCTTG----ATGGTCTTG- 3335121
Query 116642 CTCGCCCCT------CCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAG 116695
|| |||| || ||| |||||| |||||| ||||| ||||| ||| || ||
Sbjct 3335122 --CGACCCTTGTTGAGCTTCTCATACTTTTCGTAGAGAGCCTCGAACTCGTCA-CCGTAG 3335178
Query 116696 C-CTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCA 116754
| || | || || || | | ||||| | |||| ||| | || || |||
Sbjct 3335179 CAGTCAGCCAGGCCGGGACATTCGTTGGGACACATCAGAGTCCAATCGCCGTTCTTTTCA 3335238
Query 116755 ACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCT 116814
|| |||||||||||||| || || ||||| || || ||||||||| || |||| ||
Sbjct 3335239 ACACGCTTCATGAAGAGATCAGGAATCCACAGGGCGAGGAAGAGATCACGTGCGCGAACT 3335298
Query 116815 TCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGT 116874
||||| | || || || || | |||| || || | | ||||| ||||| ||
Sbjct 3335299 TCTTCCTTGCCATGGTTCTTTCGGAGGTCCATGAACTCGAACACGTCCGCATGCCAAGGC 3335358
Query 116875 TCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCC 116931
|| ||||| | |||| | || ||| ||| | || | ||||| | ||
Sbjct 3335359 TCAAGGTAGATTGCGAAAGCGCCTGGGCGCTTGTTGCCACCTTGATCCACATAACGAGCA 3335418
Query 116932 GTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCG 116990
|| || || || || ||||| ||||||| ||| | || |||||| || ||| ||
Sbjct 3335419 GTGTTATTGAAGACTCGCAGCATGGGAATGACACCGTTGGAAGTGCCATTGGTGCCCGCG 3335478
Query 116991 A-ATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACT 117049
| || || || | |||| | || | |||||||| | |||||||| || ||| ||
Sbjct 3335479 ATGTATGA-AC-CGGTGGCACGGATACGGTGGATGTTGAGGCCAATACCACCAGCCATCT 3335536
Query 117050 TTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTAT 117109
| ||||| ||| || | |||| || |||| || || || || |||| ||||
Sbjct 3335537 TGGAGATCATTGCACAGGTCTTGAGGGTGTCGTAAATGCCCTCAATGCTGTCATCCTTCA 3335596
Query 117110 TTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTG 117169
| ||| |||||||| |||| ||| | | || || || || |||||||||||||
Sbjct 3335597 TGTCGACTAGGAAGCATGAAGACAGTTGAGCCTGAGGGGTGCCCGCATTGAAGAGGGTTG 3335656
Query 117170 GTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACAGAGGG 117227
| | || || ||| | | |||| ||||||| | |||||| || | |||
Sbjct 3335657 GCGAGGCATGTGTGA--AAAACTTGCTGGACATCAAGTTGTAGGTTTCAATGACTCGCTC 3335714
Query 117228 AA---TGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTC 117284
|| ||||| ||| | ||||||| | || ||||| | ||||| |||||| ||
Sbjct 3335715 AACATTGTCTCCCCAG---ATACCGACAGCAACACGCATGATCATGTGCTGGGGTCGCTC 3335771
Query 117285 CATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 117344
| | | ||||| || | ||||||| |||| || || |||| ||| |||||
Sbjct 3335772 AACGATCTTGCCATCAAGTTTAAGGAGGTAGGATCTCTCTAAAGTTTTGAAACCGAAATA 3335831
>seq3
Length=2371949
Score = 105 bits (116), Expect = 8e-18
Identities = 112/148 (76%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 127532 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 127591
|||||||||||||| || |||||||| || || ||||| |||||||||||||| ||
Sbjct 2245345 TGGAGACCCTCGTCTCGCGAGATGAGCTCGTTGGAGAATGTGAGACCTGGCATGAGGCCA 2245404
Query 127592 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 127651
||||||||||||||||| || | | ||| | || ||||||||| || || ||
Sbjct 2245405 CGCTTCTTCAACCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGATACCTTCGACGGCA 2245464
Query 127652 GCGAACGCAAATAGACGCTCGGCAAAGG 127679
||||| |||| ||||| | || ||||
Sbjct 2245465 GCGAAGGCAACAAGACGTTGAGCGAAGG 2245492
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506923921760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |