Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq12 385 6e-102
seq33 141 1e-28
seq18 131 2e-25
>seq12
Length=4789767
Score = 385 bits (426), Expect = 6e-102
Identities = 1050/1599 (66%), Gaps = 39/1599 (2%)
Strand=Plus/Plus
Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGAC--CATCTTTTCAATGTCTTCTTTCG 6626
||||| ||||| || ||||| || || || |||| ||| || || || || || |
Sbjct 2512667 TCATCCTCATCCTTGTACTTCTCGGCTTC--GGACAACATGCGCTCGATATCCTCCTTGG 2512724
Query 6627 ATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTT 6686
| | | ||||| || || || || |||||| | ||| || || | | |||| ||
Sbjct 2512725 ACAGGCGTCCCTTGTCGTTGGTGATGACAATCTTGTTGGACTTGCCGGTGCCCTTCTCGA 2512784
Query 6687 CAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTG 6746
|| || |||| |||||||| ||||||| |||||| | || | || || ||
Sbjct 2512785 TGGCGGAAACGTTCATGATACCATTGGCATCAAGATCGAAGGTGACCTCGATCTGAGGAA 2512844
Query 6747 TACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806
||| | ||||| | ||| || || || | || || | || || | |||| |||
Sbjct 2512845 CACCTCGGGGTGCAGGTGGGATGCCGGTAAGCTCGAACTTGCCGAGAAGGTTGTTGTCCT 2512904
Query 6807 TCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTG 6866
| | || ||| ||||| || ||||| | || ||| |||| || || |||
Sbjct 2512905 TGGTGCGCTGACGCTCACCCTCGTAGACCTGGATGAGCACACCAGGCTGGTTGTCTGAGA 2512964
Query 6867 CCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGG 6926
|| ||||||| | ||||| | || || || || |||| ||| || | | ||
Sbjct 2512965 AGGTAGAGAAGACCTCGGACTTCTTGGTAGGGATAGTGGTGTTTCGCGGGATGAGCTTGG 2513024
Query 6927 TCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA 6986
|||| || ||||| ||| |||| || ||||| || || | || || | || || |
Sbjct 2513025 TCATCATGCCACCAGCAGTCTCGATACCGAGAGAGAGCGGGGCAACATCGAGAAGCAAGA 2513084
Query 6987 GGTCTTGAACAGATTCGTTCCCTT-----------CACCCGTTAAGATGGCGGCTTGGAC 7035
||| | | |||||||| |||| | ||||||||||| |||||
Sbjct 2513085 --TCTCGC------TGGTTCCCTTGGAGGAGGTGTCACCAGACAAGATGGCGGCCTGGAC 2513136
Query 7036 CGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTT 7095
| || ||||| || || |||||||||||||| || | || || | || || |||||
Sbjct 2513137 AGCGGCGCCGTAGGCAACAGCCTCATCGGGGTTGATGGACTTGTTGGGCTCCTTTCCGTT 2513196
Query 7096 AAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAAC 7155
|| || || | | | | || ||| ||||| || || || || ||||| | ||
Sbjct 2513197 GAAGTAGTCGGTGATGAGCTTCTGGATTCGGGGGATACGGGTGGAACCGCCGACAAGGAC 2513256
Query 7156 GATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGA-AGTGTTTTTTCGACAGGTT 7214
||| || | || | || || |||||||| | || ||| || |||||||| |
Sbjct 2513257 GATCTCGTGGACCTGGGACTTGTCGATCTTGGCATC-CGAGAGGACACGGTCGACAGGCT 2513315
Query 7215 CCA---TACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGG 7271
| | || ||||| | ||| |||| || || || || || ||||| ||||
Sbjct 2513316 GGAGGGTGGAT---CGGAAGAGATCCTGGCACAACTCTTCGAATCGGGCTCGGGTGATGG 2513372
Query 7272 ATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCG 7331
| || |||||||||| || || | | || || || || |||| || || |||| ||
Sbjct 2513373 AGGTGTAGAAATCAATACCCTCAAAGAGAGAGTCGATCTCGATGGAGGTCTGGGCCGACG 2513432
Query 7332 AAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGT 7391
| || | || ||||| || ||||| || || ||||| | || || || ||||| | ||
Sbjct 2513433 AGGACAGGGTGCGCTTGGCACGCTCGCAGGCAGTTCGGAGTCGTCGCAGCGCACGGGCGT 2513492
Query 7392 TACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTC 7451
| ||| | || ||||| || || || || ||||| | |||||| | || |
Sbjct 2513493 TGGAGGACAGGTCCTTCTTGTGCTTGCGCTTGAACTCGTTGACGAAGTGGTTGACCAGAC 2513552
Query 7452 TCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGA 7511
||||| || |||||||||||||| ||||| || ||||||| ||||| || ||||
Sbjct 2513553 GGTTGTCGAAGTCCTCACCACCCAAGTGGGTATCACCAGCGGTCGACTTGACCTCGAAGA 2513612
Query 7512 TACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGA 7571
||||| | || || | | | |||||||| || || |||||||| || ||||| ||||
Sbjct 2513613 TACCTTCCTCGATAGTCAGGAGAGAAACATCGAAAGTGCCACCACCGAGATCAAAGATGA 2513672
Query 7572 GTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTG 7631
| || || ||| | || | ||||| || |||||||| || || || || || || |
Sbjct 2513673 GAACATTTCGCTCGCCCTCAATCTTCTTGTCAAGACCGTAAGCAATGGCGGCAGCAGTAG 2513732
Query 7632 GTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691
| ||||| || || || ||| ||| ||||| || || | || || || || ||||
Sbjct 2513733 GCTCATTGATGATTCGGAGAACGTTGAGGCCTGCGATGAGACCAGCGTCCTTGGTGGCTT 2513792
Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751
|||| || |||||||| |||||||| ||||| || | || |||| |||| ||
Sbjct 2513793 GTCGCTGAGAATCGTTGAAGTAGGCGGGGACAGTGATAACGGCGTTGTTGACCGGGACAC 2513852
Query 7752 CGAGATACGATTCCGCGATATCTTTCAT-TTTGGTAAGAACCATCGATGAAATCTCTTCA 7810
| || || || || || | ||| ||| ||| ||| | ||| || ||||| |||
Sbjct 2513853 CAAGGTAAGACTCAGCAGTCTCTCGCATCTTTACCAAG-ATCATGGAGCTGATCTCCTCA 2513911
Query 7811 GCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCA 7870
| | || || || || || || || || | || | || || || | ||
Sbjct 2513912 GGTGTGAAGGTCTTGGTCTCGCCCTTGAACTCGATCTCGACCACAGGCTTGCTC---GCC 2513968
Query 7871 CCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAAC 7930
| ||| | ||| | | | | ||||||||| | || |||| ||| || |||
Sbjct 2513969 TTGTCGATGATCTTGAATGGGAAGTGCTTCATATCGGCCTGCACCTCCGAGTCGGAGAAC 2514028
Query 7931 TTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGG 7990
|| | || || || ||||| ||||| || |||||||| | ||||||||| || ||||
Sbjct 2514029 TTGCGGCCAATGAGGCGCTTCGCATCGAAGACTGTGTTGTGGGGGTTCATCGCGACTTGG 2514088
Query 7991 TTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG 8050
||||| || || || ||||| ||||| || | ||||| || || ||| |||| |||
Sbjct 2514089 TTCTTGGCGGCATCTCCGATCAGACGCTC---GGTGTCCGTGAATGCCACGAACGACGGG 2514145
Query 8051 GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCG 8110
|| |||||||| || ||||||||||| || || || | | || | | ||| ||
Sbjct 2514146 GTGGTTCGATTTCCCTGGTCGTTCGCGATGATCTCGATTCTATCCTCGCGATAGATACCA 2514205
Query 8111 ACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCT 8149
|| ||||| || || ||||| | ||| |||||||| |||
Sbjct 2514206 ACACACGAGTATGTGGTTCCAAGATCGATACCGATGGCT 2514244
>seq33
Length=3634720
Score = 141 bits (156), Expect = 1e-28
Identities = 328/488 (67%), Gaps = 10/488 (2%)
Strand=Plus/Minus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
||||||||| |||||||| | || ||||| || || ||||| ||| || |||| |||
Sbjct 1113204 ATCGAAATCCTCACCACCGAGATGGGTATCACCGGCAGTCGCCAGGACCTCGAAGACACC 1113145
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
|| ||| | || || ||||| || ||||||||||| || || | || |
Sbjct 1113144 CTGGTCGATGGAGAGCAGGGAGACATCGAAAGTACCACCACCGAGATCGTA---GACAAT 1113088
Query 7576 GTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634
| || | || ||| | | | |||| || |||||||| ||||| || || ||||| || |
Sbjct 1113087 GATC-TGGCGTTCGCCATCGGTCTTGTCAAGACCGTATGCGATGGCAGCGGCCGTAGGCT 1113029
Query 7635 CATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693
| || | ||||| || |||| || || || ||||| | | || || || || || |||
Sbjct 1113028 CGTTGACAATACGGAGGACA-TTGAGACCGGCAATGATACCGGCGTCCTTGGTGGCCTGT 1112970
Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753
| || ||||| |||||||| ||||| || ||||| |||| ||||| ||||| ||
Sbjct 1112969 CTCTGGTTGTCGTTGAAGTAGGCTGGGACAGTGACGACGGCGTGAGTGACCTTCTTGCCC 1112910
Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCC 7813
|| || | || |||| || ||||| || |||| ||| | || | || ||||
Sbjct 1112909 AGGTAGGCCTCAGCGACCTCCTTCATCTTTCCGAGAATCATGGCGGAGACTTCCTCAGGG 1112850
Query 7814 GCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCG 7873
| ||||| || || ||||| | || |||| | ||||| || || | |
Sbjct 1112849 GTAAACTTCTTGTCCTCGCCGTTGACTTCGACTTGGACGATGGGCTT---GCCATCCTTG 1112793
Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933
|| ||||| || | ||| | |||||||| |||||| | | ||| || ||||||
Sbjct 1112792 TTGAGGACCTTGTATGGCCAGTGCTTCATATCAGCTTGGATGTCCTTGTCGGAGAACTTT 1112733
Query 7934 CTTCCGAT 7941
| |||||
Sbjct 1112732 CGGCCGAT 1112725
>seq18
Length=3787933
Score = 131 bits (144), Expect = 2e-25
Identities = 361/545 (66%), Gaps = 15/545 (3%)
Strand=Plus/Minus
Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303
|| ||||| || || |||||||| || | | |||||| ||| ||| | | ||
Sbjct 1837298 AGCTCCTCGAATCGGGCACGGGTGATCTGCATCTGGAAATCCTGGCCATCGAAGAGAGAG 1837239
Query 7304 TCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361
||||| || ||||| | || || || | || | |||||||| || || || || |
Sbjct 1837238 TCAATCTCGATGGTAGCCTGGGCACCGCTG--GACAGGGTTCGCTTGGCACGTTCGCAGG 1837181
Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGT-TTACGT 7420
| || || | | || |||||||| | | ||| | ||||| ||||| ||| || ||
Sbjct 1837180 CAGTCCGAAGTCTTCGGAGGGCACGGGCATCACCAGTGATATCCTTCTT-TGTCTTTCGG 1837122
Query 7421 TTAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479
|| || | | |||| |||| |||| | | ||||||||| | |||||||||||
Sbjct 1837121 AGGAAGTCCTTCTTGCAGTGGTCGA-GGAGGTTAGTATCGAAATCCTGTCCACCCAAGTG 1837063
Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539
|| || || ||||| || ||||| || | ||| || | ||||| | | ||| ||
Sbjct 1837062 AGTGTCACCAGCGGTGGCCTTGACAGTGAAAACACCGCCCTGGATGTTGAGGAGCGACAC 1837003
Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT 7599
||| || ||||| ||||| || || |||| || || || || | | | | |||
Sbjct 1837002 ATCGAAGGTACCGCCACCGAGATCGTAAATCAGAACATTTCGCTCCTTGCC--AGACCTT 1836945
Query 7600 -----ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654
| |||||||| ||||| || || || || ||||| || || ||||| || |
Sbjct 1836944 CCGGAGCCCAGACCGTAGGCGATGGCTGCGGCAGTAGGTTCGTTGATGATACGGAGCACG 1836885
Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714
|| || || ||||| | | || || || || || || ||||| ||||| ||||||
Sbjct 1836884 TTAAGTCCGGCAATGGCACCGGCGTCCTTGGTAGCCTGACGTTGGTTGTCGTTGAAGTAG 1836825
Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774
|| || || || | ||| || | | || ||||| ||||| | | ||||| || ||
Sbjct 1836824 GCAGGCACGGTGATGACGGCCTTCTCAACCTTCTTTCCGAGCTTCACCTCCGCAATCTCC 1836765
Query 7775 TTCAT 7779
|||||
Sbjct 1836764 TTCAT 1836760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635132514190240
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