Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq12 201 1e-46
seq3 96.9 4e-15
>seq12
Length=4789767
Score = 201 bits (222), Expect = 1e-46
Identities = 956/1501 (64%), Gaps = 35/1501 (2%)
Strand=Plus/Minus
Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTG---TC-TT 111601
||||| ||| |||| || | |||| | |||||||| | ||| ||||| || ||
Sbjct 3335831 TATTTCGGTTTCAAAACTTTAGAGAGATCCTACCTCCTTAAACTTGATGGCAAGATCGTT 3335772
Query 111602 GATGGAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATAT 111661
|| || || ||| ||||| ||||||| || || |||||||| || || || |
Sbjct 3335771 GAGCGA----CCCCAGCACATGATCATGCGTGTTGCTGTCGGTATCTGGGGAGACAATGT 3335716
Query 111662 TGATTCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACC 111721
||| || | || || ||| || ||||||| | | |||| || || | ||
Sbjct 3335715 TGAGCGAGTCATTGAAACCTACAACTTGATGTCCAGCAAGTTTTTCACACATGCCTCGCC 3335656
Query 111722 AACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAA 111781
|||||||||||| || || || || | ||| |||| || ||||| | | |
Sbjct 3335655 AACCCTCTTCAATGCGGGCACCCCTCAGGCTCAACTGTCTTCATGCTTCCTAGTCGACAT 3335596
Query 111782 CAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAA 111841
||||| || || | |||||||||| ||| |||| ||||| ||||| ||
Sbjct 3335595 GAAGGATGACAGCATTGAGGGCATTTACGACACCCTCAAGACCTGTGCAATGATCTCCAA 3335536
Query 111842 GTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAG 111901
| |||||||||||| || | ||||||| | || | |||| | || ||
Sbjct 3335535 GATGGCTGGTGGTATTGGCCTCAACATCCACCGTATCCGTGCCACCGGTTCATACATCGC 3335476
Query 111902 AGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 111961
|| || ||||| || | ||| | ||||| ||||| || || || || ||| ||
Sbjct 3335475 GGGCACCAATGGCACTTCCAACGGTGTCATTCCCATGCTGCGAGTCTTCAATAACACTGC 3335416
Query 111962 GCGCTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGA 112015
|| ||||| | |||| ||| ||| | || | | || ||||| |||| |||||
Sbjct 3335415 TCGTTATGTGGATCAAGGTGGCAACAAGCGCC-CAGGCG--CTTTCGCAATCTACCTTGA 3335359
Query 112016 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGA 112075
||| ||||| ||||| | | |||||| | || | || ||||| || | || ||
Sbjct 3335358 GCCTTGGCATGCGGACGTGTTCGAGTTCATGGACCTCCGAAAGAACCATGGCAAGGAAGA 3335299
Query 112076 GGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 112135
| || || ||||||||| ||| || |||||||| ||||||||||||||| | ||
Sbjct 3335298 AGTTCGCGCACGTGATCTCTTCCTCGCCCTGTGGATTCCTGATCTCTTCATGAAGCGTGT 3335239
Query 112136 TGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGC 112195
||| ||| ||| ||||| |||| | ||||| || | ||||| || | ||
Sbjct 3335238 TGAAAAGAACGGCGATTGGACTCTGATGTGTCCCAACGAATGTCCCGGCCTGGCTGACTG 3335179
Query 112196 CGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAG--AAAGTCGGGCGACT 112253
| ||||| ||||| || || |||||| |||||| || |||| || ||| |
Sbjct 3335178 CTACGGTGACGAGTTCGAGGCTCTCTACGAAAAGTATGA-GAAGCTCAACAAGGGTCGC- 3335121
Query 112254 GCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGG 112312
||| | | || | || | | ||| | || || || || | || || || || ||
Sbjct 3335120 AAGACCAT-CAAGGCACAGAAGCTTTGGTATGCCATCCTAGAGGCCCAGACTGAAACCGG 3335062
Query 112313 TACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGG 112372
| || | ||||| |||||||| || || || | ||||| || || |||||| | ||
Sbjct 3335061 AAACCCTTTCATGCTCTACAAAGATGCTTGCAATCGCAAGAGCAACCAGAAGAATCTTGG 3335002
Query 112373 TGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGAC 112432
||| || ||||| ||||| || || ||| | || | | | ||||||
Sbjct 3335001 CACCATCCGCAGCTCCAATCTCTGCACGGAGATCATCGAGTACTGCGCCCCCGATGAGGT 3334942
Query 112433 GGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC 112492
|| || || ||| | || || | || | || | |||||| | | | | ||| |
Sbjct 3334941 CGCCGTCTGCAACTTGGCTTCGCTGGCCTTGCCGTCCTTTGTGGA-CTACA-ATGAAGGC 3334884
Query 112493 --ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGA 112550
| ||| | |||| || ||||| ||||| || ||| |||| | || |
Sbjct 3334883 TGCTATGACTTCCAAAAGCTGCACGATGTTACCGAAGTTGTTGTTCGAAACTTGAATAAG 3334824
Query 112551 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 112610
| || || || | ||||||||| | || | || || ||| | ||| |
Sbjct 3334823 ATCATCGACGTCAACTACTACCCCGTTCCGGAAGCACAGAACAGCAACATGCGCCACAGG 3334764
Query 112611 CCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTT 112670
|| |||||| |||| || || ||||| || |||| ||| | ||||| | ||
Sbjct 3334763 CCCATTGGTGTCGGCGTTCAGGGTCTTGCAGATGCGTTCCTAGCCCTTCGCCTGCCTTTC 3334704
Query 112671 GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCT 112730
|| || || || || | || || |||||||||||||| || || ||||||
Sbjct 3334703 GAGTCTCCTGAGGCACGAGAGCTGAACAAGCAGATATTTGAGACAATTTACCATGCCGCT 3334644
Query 112731 CTTGAGGCGAGTTC---GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGT 112787
|| || ||| |||| | || ||| | || ||||| || | || ||
Sbjct 3334643 CTCACTGC---TTCCATGGAGCTTGCCAAGGAGCAAGGCCCATACTCCACATACGAAGGC 3334587
Query 112788 TCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCA 112846
||||| | || ||||| | || || ||||| |||| |||| |||| || | ||
Sbjct 3334586 TCTCCTGTATCTCAAGGCATTCTGCAGTTTGACATGT-GGAATGTGAAGCCTTCCGATCT 3334528
Query 112847 CTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 112906
| ||||||| | || ||||| | ||||||| | | || |||| |||||||| |
Sbjct 3334527 TTGGGACTGGGCATCGCTGAAGGAGCAAATCAAGGCGCATGGCATTCGCAACAGTCTGCT 3334468
Query 112907 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 112966
| ||||||||||| || ||| || | || ||||||||||| || || ||||||||
Sbjct 3334467 AGTAGCACCAATGCCTACCGCCAGTACTTCCCAGATCTTGGGTAACAACGAGTGCTTTGA 3334408
Query 112967 ACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 113026
|| ||||| | || ||||| | | ||| ||| || || ||||| | | |||||
Sbjct 3334407 GCCGTACACATCCAATATCTACCAACGCAGAGTCCTTGCTGGCGAGTTCCAGGTCGTCAA 3334348
Query 113027 C 113027
|
Sbjct 3334347 C 3334347
>seq3
Length=2371949
Score = 96.9 bits (106), Expect = 4e-15
Identities = 155/216 (72%), Gaps = 10/216 (5%)
Strand=Plus/Minus
Query 102109 CAGTTCCATGTATTCA-AAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAG 102164
||||||| || ||| |||||| || || ||||| || ||| || || | |||
Sbjct 2245555 CAGTTCC-TGCCATCAGAAAGAAGGCTGACTGGGCCATTCGATGGATTACCGACAAGAAG 2245497
Query 102165 TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCT 102224
|| | |||| ||| | || || | || || || || || ||||||||||||
Sbjct 2245496 TC---TACCTTCGCTCAACGTCTTGTTGCCTTCGCTGCCGTCGAAGGTATCTTCTTCAGC 2245440
Query 102225 GGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 102283
||| |||| ||| | || | ||| | |||||||| || ||||||||||||||| ||
Sbjct 2245439 GGTGCCTT-TGCTTCCATCTTCTGGTTGAAGAAGCGTGGCCTCATGCCAGGTCTCACATT 2245381
Query 102284 CTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCA 102319
|||||||||||| ||||| || |||||||| |||||
Sbjct 2245380 CTCCAACGAGCTCATCTCGCGAGACGAGGGTCTCCA 2245345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742120665920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |