Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02- 10] 36 sequences; 42,868,360 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq33 89.7 4e-13 >seq33 Length=3634720 Score = 89.7 bits (98), Expect = 4e-13 Identities = 115/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 101313 CATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTT 101372 |||| ||||| ||||| |||||||| |||| || || || || || ||||| ||||| | Sbjct 2337658 CATCTTCCAACTGCTTTCCTGCAAAGATCAGTCGTTGCTGGTCTGGTGGAATACCTTCCT 2337717 Query 101373 TATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGA-CGTTTCCACTTCAAGAGTG 101431 | ||||||||||| || ||| | || | ||||| || | | ||| |||||||| Sbjct 2337718 TGTCTTGAATTTTACTCTTGACATTGTCGATCGTGTCTGATGGGTGACAC-TCAAGAGTT 2337776 Query 101432 ACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGC 101467 | || |||||||| ||| || |||||||| ||| Sbjct 2337777 ATTGTCTTGCCGGTCTTAGTCTTCACAAATATTTGC 2337812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396278226132852