Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq12 309 6e-79
>seq12
Length=4789767
Score = 309 bits (342), Expect = 6e-79
Identities = 1055/1619 (65%), Gaps = 59/1619 (4%)
Strand=Plus/Plus
Query 212687 CAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTC 212746
|| ||| | ||||| ||||||| ||| || ||||| | | | ||| || ||||| |
Sbjct 3334125 CATATGGATGTTCAAGGACTGAGACTGATCAATGAAGGCACCGCGGTCGGCAGCCATCTG 3334184
Query 212747 TATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGG 212806
| | | | ||| |||| ||||| || |||||| ||| |||||| || | ||
Sbjct 3334185 GACAACAGTACGCTGTGAGATTTCCCAGACAGTCTTGTAGAGGGCTTTGATATCTGCGGG 3334244
Query 212807 GAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGTCAGCTGCAGGCGCATGTC 212863
|| | || |||||||| || || || | | ||| | | | | |||| |
Sbjct 3334245 GATGTTTGGAATGTTCTGGACGGAGCCGTTTTCAGCAATGATACGGTTCTT---CATGGC 3334301
Query 212864 CTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAA 212923
|| ||| | |||| || |||| ||| | || ||||||||| | ||||||
Sbjct 3334302 GTCAGACCACAAGCCCATGTCAACCAGATCCTTTAGGAGCCAAGGGTTGACGACCTGGAA 3334361
Query 212924 GTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTT 212983
|| || | || || || | ||||| | || || ||||| ||||| | || ||||||
Sbjct 3334362 CTCGCCAGCAAGGACTCTGCGTTGGTAGATATTGGATGTGTACGGCTCAAAGCACTCGTT 3334421
Query 212984 GTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCT 213043
||| |||| ||||| | ||| ||||| || ||||| || || || || |||||||| |
Sbjct 3334422 GTTACCCAAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACTAGCAGACTGTTGCG 3334481
Query 213044 CACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTC 213103
| || ||| | ||| | | ||| |||||||||||| | || |||
Sbjct 3334482 AATGCCATGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCCAAAGATCGGA-AGG-- 3334538
Query 213104 CTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTG 213163
|||||| ||||||||||||||||||| ||||||| || || ||| |
Sbjct 3334539 ------CTTCACATTCCACATGTCAAACTGCAGAATGCCTTGAGATACAGGAGAGCCTTC 3334592
Query 213164 GTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTA 213223
||| | |||||| ||||| ||||||||||| ||||| ||| || || || || |
Sbjct 3334593 GTATGTGGAGTATGGGCCTTGCTCCTTGGCAAGCTCCATGGAAGCAGTGAGAGCGGCATG 3334652
Query 213224 GTAGATGGTTTCAAATATCTCCCTGTTGAGCT-TCTTGGCCTCTGGGGACGTGAAGGGCA 213282
||| || || |||||||||| | |||| |||| || | ||||| || ||| ||| ||||
Sbjct 3334653 GTAAATTGTCTCAAATATCTGCTTGTTCAGCTCTCGT-GCCTCAGGAGACTCGAAAGGCA 3334711
Query 213283 TCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTC 213342
| | | ||||| |||| || || ||||| || |||| || ||||| ||||| |
Sbjct 3334712 GGCGAAGGGCTAGGAACGCATCTGCAAGACCCTGAACGCCGACACCAATGGGCCTGTGGC 3334771
Query 213343 TCAGGTTAGACTT-GGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTG 213401
|| ||| || | || ||| | |||||| ||||| |||||||||||| ||
Sbjct 3334772 GCATGTTGCTGTTCTGTGC-TTCCGGAACGGGGTAGTAGTTGACGTCGATGATCTTATTC 3334830
Query 213402 AGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCC 213461
| ||| || | |||| ||| |||| | ||| || || ||| | ||||
Sbjct 3334831 AAGTTTCGAACAACAACTTCGGTAACATCGTGCAG---CTTTTG---GAAGTCATAGCAG 3334884
Query 213462 CC------GTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACC 213515
|| || | |||||| |||| ||| | |||| |||||| ||||| |||
Sbjct 3334885 CCTTCATTGTAGTCCACAAAGGACGGCAAGGCCAGCGAAGCCAAGTTGCAGACGGCGACC 3334944
Query 213516 TCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCC 213575
|| | | | | |||||| |||||||| ||||| || ||| || |||||||||||
Sbjct 3334945 TCATCGGGGGCGCAGTACTCGATGATCTCCGTGCAGAGATTGGAGCTGCGGATGGTGCCA 3335004
Query 213576 AGGTTCTGGTGGTTTGACTTTGCG-TTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCC 213634
|| |||| ||| ||| ||||| ||| || ||| |||||||||||| | ||| ||
Sbjct 3335005 AGATTCTTCTGG-TTGCTCTTGCGATTGCAAGCATCTTTGTAGAGCATGAAAGGGTTTCC 3335063
Query 213635 GGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACCTGGCCTTGACCACCCGC 213692
||| || ||||| | | || | |||| ||| || | | ||||||| |
Sbjct 3335064 GGTTTCAGTCTGGGCCTCTAGGA--TGGCATACCAAAGCTTCTGTGCCTTGA----TGGT 3335117
Query 213693 CTGACAGCTCCGGGCGTAGC--CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCC 213750
|| | | || | ||| ||| |||| ||||||||| | | ||| |||| ||
Sbjct 3335118 CTTGC-GACCCTTGTTGAGCTTCTCATACTTTTCGTAGAGAGCCTCGAACTCGTCACCGT 3335176
Query 213751 AG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCT 213809
|| | | | |||| || ||||| ||||||||| || |||| || |||| | |
Sbjct 3335177 AGCAGTCAG-CCAGGCCGGGACATTCGTTGGGACACATCAGAGTCCAATCGCCGTTCTTT 3335235
Query 213810 CTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTC-CCTGGTCCT 213868
|| | || |||||| || || || | |||||| ||| ||| || || | || |
Sbjct 3335236 TCAACACGCTTCATGAAGAGATCAGGAATCCACAGGGCGAGGAAGAGATCACGTGCGCGA 3335295
Query 213869 CCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCA 213928
|| || ||| ||| ||| || || || || | || || || | |||||| |||||
Sbjct 3335296 ACT-TCTTCCTTGCCATGGTTCTTTCGGAGGTCCATGAACTCGAACACGTCCGCATGCCA 3335354
Query 213929 CGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCT 213985
||||| | |||||| || || ||||| | || | ||||| || || ||||| |
Sbjct 3335355 AGGCTCAAGGTAGATTGCGAAAGCGCCTGGGCGCTTGTTGCCACCTTGATCCACATAACG 3335414
Query 213986 GGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCC 214045
|| | ||||||| ||||| | ||| | | |||||||| || ||||| ||
Sbjct 3335415 AGCAGTGTTATTGAAGACTCGCAGCATGGGAATGACACCGTTGGAAGTGCCATTGGTGCC 3335474
Query 214046 CGCTATATACGAGCCGGAGGCCC---TCAGGTTGCTCATGGAGAGCCCTATGCCACCGGC 214102
||| || || || |||| ||| | | ||| | ||| ||| || || ||||| ||
Sbjct 3335475 CGCGATGTATGAACCGGTGGCACGGATACGGTGG---ATGTTGAGGCCAATACCACCAGC 3335531
Query 214103 GTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATC 214162
|||||||||||| || ||| | | | || || ||||| | |||||||||||
Sbjct 3335532 CATCTTGGAGATCATTGCACAGGTCTTGAGGGTGTCGTAAATGCCCTCAATGCTGTCATC 3335591
Query 214163 TGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG-GACGAGCCAGAGTTGAAAA 214221
| | || | | |||||| || || | | ||||| | | ||| | ||||| |
Sbjct 3335592 CTTCATGTCGACTAGGAAGCATGAAGACAG-TTGAGCCTGAGGGGTGCCCGCATTGAAGA 3335650
Query 214222 GCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACT 214280
| || || |||||| | | ||||||| | || | | ||||||| || | ||||
Sbjct 3335651 GGGTTGGCGAGGCATGTGTGAAAAACTTGCTGGACATCAAGTTGTAGGTTTCAATGACT 3335709
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931532380810240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |