Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq12 188 9e-43
seq3 95.1 1e-14
>seq12
Length=4789767
Score = 188 bits (208), Expect = 9e-43
Identities = 1111/1757 (63%), Gaps = 69/1757 (4%)
Strand=Plus/Minus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACA---TTGATTCT 75268
|| ||| ||||| ||||||| || || |||| ||| ||| ||||| ||||
Sbjct 3335765 CCCCAGCACATGATCATGCGTGTTGCTGTCGGTATCT---GGGGAGACAATGTTGAGCGA 3335709
Query 75269 GTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCC 75326
||| | || || ||| || ||||||| |||| | | ||| || || | |||||||
Sbjct 3335708 GTCATTGAAACCTACAACTTGATGTCCAGCAAGTTTT--TCACACATGCCTCGCCAACCC 3335651
Query 75327 TCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGG 75386
|||||||||| || || || | || |||| |||||||| ||| || ||||
Sbjct 3335650 TCTTCAATGCGGGCACCCCTCAGGCTCAACTGTCTTCATGCTTCCTAGTCGACATGAAGG 3335591
Query 75387 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGG 75446
| ||| || | || || || | || || | | ||||| ||||| ||| ||
Sbjct 3335590 ATGACAGCATTGAGGGCATTTACGACACCCTCAAGACCTGTGCAATGATCTCCAAGATGG 3335531
Query 75447 CTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGA 75506
|||| |||||||| | ||||||| | | | |||| || || ||| |
Sbjct 3335530 CTGGTGGTATTGGCCTCAACATCCACCGTATCCGTGCCACCGGTTCATACATCGCGGGCA 3335471
Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566
| ||||| || | ||| | ||||| ||||| || || || || ||| || || |
Sbjct 3335470 CCAATGGCACTTCCAACGGTGTCATTCCCATGCTGCGAGTCTTCAATAACACTGCTCGTT 3335411
Query 75567 ATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622
|||| |||||| | ||| | || || | |||| ||||| | || || |||
Sbjct 3335410 ATGTGGATCAAG-GTGGCAACAAGCGCCCAGGCGCTTTCGCAATCTACCTTGAGCCTTGG 3335352
Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682
||||| || | | |||||| | || | ||| ||||| || | ||||| | |||
Sbjct 3335351 CATGCGGACGTGTTCGAGTTCATGGACCTCCGAAAGAACCATGGCAAGGAAGAAGTTCGC 3335292
Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742
| |||||||| ||||||||||||| || || ||||||||||| ||||| ||
Sbjct 3335291 GCACGTGATCTCTTCCTCGCCCTGTGGATTCCTGATCTCTTCATGAAGCGTGTTGAAAAG 3335232
Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802
|| | ||| |||| | ||||| || | || || || | ||| |||
Sbjct 3335231 AACGGCGATTGGACTCTGATGTGTCCCAACGAATGTCCCGGCCTGGCTGACTGCTACGGT 3335172
Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGG------AGGGTAGAGCCAATGCG 75856
|| ||||| || || |||||| ||||||||| || ||||| | ||| |
Sbjct 3335171 GACGAGTTCGAGGCTCTCTACGAAAAGTATGAGAAGCTCAACAAGGGTCG---CAA---G 3335118
Query 75857 ACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915
|| | | || | | || | ||||| | || || || | | ||||| || || ||||
Sbjct 3335117 ACCAT-CAAGGCACAGAAGCTTTGGTATGCCATCCTAGAGGCCCAGACTGAAACCGGAAA 3335059
Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975
|| | ||||| ||||| |||||||| || ||||| ||||| |||||| | || ||
Sbjct 3335058 CCCTTTCATGCTCTACAAAGATGCTTGCAATCGCAAGAGCAACCAGAAGAATCTTGGCAC 3334999
Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035
||| ||||| ||||| |||||||| || | |||||| | |||||| ||
Sbjct 3334998 CATCCGCAGCTCCAATCTCTGCACGGAGATCATCGAGTACTGCGCCCCCGATGAGGTCGC 3334939
Query 76036 TGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT------CAATGAAGAGACTCG 76089
|| ||||| ||||| || | ||| | || | ||| |||||||| || |
Sbjct 3334938 CGTCTGCAACTTGGCTTCGCTGGCCTTGCCGTCCTTTGTGGACTACAATGAAGG--CT-G 3334882
Query 76090 CACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTAC-CAAAAATCTAAACC 76148
| | ||| | |||| || || || | || | ||||| | ||| | ||
Sbjct 3334881 C---TATGACTTCCAAAAGCTGCACGATGTTACCGAAGTTGTTGTTCGAAACTTGAATAA 3334825
Query 76149 GAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACA 76208
|| |||| ||| || | || |||||| | || | || || ||||| ||||
Sbjct 3334824 GA-TCATCGACGTCAACTACTACCCCGTTCCGGAAGCACAGAACAGCAACATGCGCCACA 3334766
Query 76209 GACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCAT 76268
| || |||||| | || ||||| ||||| || |||| || | ||| | |
Sbjct 3334765 GGCCCATTGGTGTCGGCGTTCAGGGTCTTGCAGATGCGTTCCTAGCCCTTCGCCTGCCTT 3334706
Query 76269 TTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328
| || || ||| || ||| |||| | || ||||| || || || || ||
Sbjct 3334705 TCGAGTCTCCTGAGGCACGAGAGCTGAACAAGCAGATATTTGAGACAATTTACCATGCCG 3334646
Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388
| || || || | || | | ||||| | || |||| || || |
Sbjct 3334645 CTCTCACTGCTTCCATGGAGCTTGCCAAGGAGCAAGGCCCATACTCCACATACGAAGGCT 3334586
Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACT 76448
|||| | || ||||| | || |||||||| |||||| || ||||| || | | ||
Sbjct 3334585 CTCCTGTATCTCAAGGCATTCTGCAGTTTGACATGTGG-AATGTGAAGCCTTCCG-ATCT 3334528
Query 76449 ACG--ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 76506
| |||||| || ||||| | ||||||| | | || |||| |||||||| |
Sbjct 3334527 TTGGGACTGGGCATCGCTGAAGGAGCAAATCAAGGCGCATGGCATTCGCAACAGTCTGCT 3334468
Query 76507 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 76566
| ||||||||||| || ||| || | || ||||||||||| || || ||||||||
Sbjct 3334467 AGTAGCACCAATGCCTACCGCCAGTACTTCCCAGATCTTGGGTAACAACGAGTGCTTTGA 3334408
Query 76567 ACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAA 76626
|| |||||| | || ||||||| | ||| ||| || || ||||| | |||||
Sbjct 3334407 GCCGTACACATCCAATATCTACCAACGCAGAGTCCTTGCTGGCGAGTTCCAGGTCGTCAA 3334348
Query 76627 CAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGA--- 76683
| ||| | || || || | || || | ||||| | | |||||| |
Sbjct 3334347 CCCTTGGCTCCTAAAGGATCTGGTTGACATGGGCTTGTGGTCTGACGCCATGAAGAACCG 3334288
Query 76684 TCTCA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCA 76742
| ||| || ||||| | || ||| | || || || || | ||||| | |||||||
Sbjct 3334287 TATCATTGCTGAAAAC----GGCTCCGTCCAGAACATTCCAAACATCCCCGCAGATATCA 3334232
Query 76743 AGAATCTCTACCGCACAGTGTGGGAAATC---AAGATGAAAGATGTCATTGACATGGCCG 76799
| |||||| || || ||||||||| || | | |||| | ||||| |
Sbjct 3334231 AAGCCCTCTACAAGACTGTCTGGGAAATCTCACAGCGTACTGTTGTC---CAGATGGCTG 3334175
Query 76800 CAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGA--ATCTATTCATGGAAAGT 76855
| || || ||| ||||||||||| |||| ||| ||| ||| || ||| ||
Sbjct 3334174 CCGACCGCGGTGCCTTCATTGATC--AGTCTCAGTCCTTGAACATCCAT--ATGAAAGAC 3334119
Query 76856 CCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACC 76915
|| || ||| |||| || | |||||| | || ||||| | || || || |||
Sbjct 3334118 CCGACTATGGGCAAGATCACCAGCATGCATTTCGCCGGCTGGAAGCTCGGTCTTAAGACC 3334059
Query 76916 GGAATGTACTATCTCCG 76932
||||||||||| |||||
Sbjct 3334058 GGAATGTACTACCTCCG 3334042
>seq3
Length=2371949
Score = 95.1 bits (104), Expect = 1e-14
Identities = 142/198 (72%), Gaps = 8/198 (4%)
Strand=Plus/Minus
Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGTCTCGCTCCTTCGCCGAG 65079
|||||||| | ||||| || |||| || |||| |||||| ||||||| |
Sbjct 2245538 AAGAAGGCTGACTGGGCCATTCGATGGATTACCGACAAGAAGTCTA---CCTTCGCTCAA 2245482
Query 65080 CGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTAT 65138
|| ||| |||| || || || || |||||||||||| ||| | || ||| | ||
Sbjct 2245481 CGTCTTGTTGCCTTCGCTGCCGTCGAAGGTATCTTCTTCAGCGGTGCCTT-TGCTTCCAT 2245423
Query 65139 TTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTC 65198
| |||||||||||||| || ||||||||||| || ||||| || || || || ||
Sbjct 2245422 CTTCTGGTTGAAGAAGCGTGGCCTCATGCCAGGTCTCACATTCTCCAACGAGCTCATCTC 2245363
Query 65199 CCGAGATGAGGGTCTCCA 65216
||||| |||||||||||
Sbjct 2245362 GCGAGACGAGGGTCTCCA 2245345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569331543680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |