Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02- 10] 36 sequences; 42,868,360 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq12 188 9e-43 seq3 95.1 1e-14 >seq12 Length=4789767 Score = 188 bits (208), Expect = 9e-43 Identities = 1111/1757 (63%), Gaps = 69/1757 (4%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACA---TTGATTCT 75268 || ||| ||||| ||||||| || || |||| ||| ||| ||||| |||| Sbjct 3335765 CCCCAGCACATGATCATGCGTGTTGCTGTCGGTATCT---GGGGAGACAATGTTGAGCGA 3335709 Query 75269 GTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCC 75326 ||| | || || ||| || ||||||| |||| | | ||| || || | ||||||| Sbjct 3335708 GTCATTGAAACCTACAACTTGATGTCCAGCAAGTTTT--TCACACATGCCTCGCCAACCC 3335651 Query 75327 TCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGG 75386 |||||||||| || || || | || |||| |||||||| ||| || |||| Sbjct 3335650 TCTTCAATGCGGGCACCCCTCAGGCTCAACTGTCTTCATGCTTCCTAGTCGACATGAAGG 3335591 Query 75387 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGG 75446 | ||| || | || || || | || || | | ||||| ||||| ||| || Sbjct 3335590 ATGACAGCATTGAGGGCATTTACGACACCCTCAAGACCTGTGCAATGATCTCCAAGATGG 3335531 Query 75447 CTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGA 75506 |||| |||||||| | ||||||| | | | |||| || || ||| | Sbjct 3335530 CTGGTGGTATTGGCCTCAACATCCACCGTATCCGTGCCACCGGTTCATACATCGCGGGCA 3335471 Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566 | ||||| || | ||| | ||||| ||||| || || || || ||| || || | Sbjct 3335470 CCAATGGCACTTCCAACGGTGTCATTCCCATGCTGCGAGTCTTCAATAACACTGCTCGTT 3335411 Query 75567 ATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622 |||| |||||| | ||| | || || | |||| ||||| | || || ||| Sbjct 3335410 ATGTGGATCAAG-GTGGCAACAAGCGCCCAGGCGCTTTCGCAATCTACCTTGAGCCTTGG 3335352 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 ||||| || | | |||||| | || | ||| ||||| || | ||||| | ||| Sbjct 3335351 CATGCGGACGTGTTCGAGTTCATGGACCTCCGAAAGAACCATGGCAAGGAAGAAGTTCGC 3335292 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 | |||||||| ||||||||||||| || || ||||||||||| ||||| || Sbjct 3335291 GCACGTGATCTCTTCCTCGCCCTGTGGATTCCTGATCTCTTCATGAAGCGTGTTGAAAAG 3335232 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802 || | ||| |||| | ||||| || | || || || | ||| ||| Sbjct 3335231 AACGGCGATTGGACTCTGATGTGTCCCAACGAATGTCCCGGCCTGGCTGACTGCTACGGT 3335172 Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGG------AGGGTAGAGCCAATGCG 75856 || ||||| || || |||||| ||||||||| || ||||| | ||| | Sbjct 3335171 GACGAGTTCGAGGCTCTCTACGAAAAGTATGAGAAGCTCAACAAGGGTCG---CAA---G 3335118 Query 75857 ACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915 || | | || | | || | ||||| | || || || | | ||||| || || |||| Sbjct 3335117 ACCAT-CAAGGCACAGAAGCTTTGGTATGCCATCCTAGAGGCCCAGACTGAAACCGGAAA 3335059 Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975 || | ||||| ||||| |||||||| || ||||| ||||| |||||| | || || Sbjct 3335058 CCCTTTCATGCTCTACAAAGATGCTTGCAATCGCAAGAGCAACCAGAAGAATCTTGGCAC 3334999 Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035 ||| ||||| ||||| |||||||| || | |||||| | |||||| || Sbjct 3334998 CATCCGCAGCTCCAATCTCTGCACGGAGATCATCGAGTACTGCGCCCCCGATGAGGTCGC 3334939 Query 76036 TGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT------CAATGAAGAGACTCG 76089 || ||||| ||||| || | ||| | || | ||| |||||||| || | Sbjct 3334938 CGTCTGCAACTTGGCTTCGCTGGCCTTGCCGTCCTTTGTGGACTACAATGAAGG--CT-G 3334882 Query 76090 CACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTAC-CAAAAATCTAAACC 76148 | | ||| | |||| || || || | || | ||||| | ||| | || Sbjct 3334881 C---TATGACTTCCAAAAGCTGCACGATGTTACCGAAGTTGTTGTTCGAAACTTGAATAA 3334825 Query 76149 GAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACA 76208 || |||| ||| || | || |||||| | || | || || ||||| |||| Sbjct 3334824 GA-TCATCGACGTCAACTACTACCCCGTTCCGGAAGCACAGAACAGCAACATGCGCCACA 3334766 Query 76209 GACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCAT 76268 | || |||||| | || ||||| ||||| || |||| || | ||| | | Sbjct 3334765 GGCCCATTGGTGTCGGCGTTCAGGGTCTTGCAGATGCGTTCCTAGCCCTTCGCCTGCCTT 3334706 Query 76269 TTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328 | || || ||| || ||| |||| | || ||||| || || || || || Sbjct 3334705 TCGAGTCTCCTGAGGCACGAGAGCTGAACAAGCAGATATTTGAGACAATTTACCATGCCG 3334646 Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 | || || || | || | | ||||| | || |||| || || | Sbjct 3334645 CTCTCACTGCTTCCATGGAGCTTGCCAAGGAGCAAGGCCCATACTCCACATACGAAGGCT 3334586 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACT 76448 |||| | || ||||| | || |||||||| |||||| || ||||| || | | || Sbjct 3334585 CTCCTGTATCTCAAGGCATTCTGCAGTTTGACATGTGG-AATGTGAAGCCTTCCG-ATCT 3334528 Query 76449 ACG--ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 76506 | |||||| || ||||| | ||||||| | | || |||| |||||||| | Sbjct 3334527 TTGGGACTGGGCATCGCTGAAGGAGCAAATCAAGGCGCATGGCATTCGCAACAGTCTGCT 3334468 Query 76507 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 76566 | ||||||||||| || ||| || | || ||||||||||| || || |||||||| Sbjct 3334467 AGTAGCACCAATGCCTACCGCCAGTACTTCCCAGATCTTGGGTAACAACGAGTGCTTTGA 3334408 Query 76567 ACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAA 76626 || |||||| | || ||||||| | ||| ||| || || ||||| | ||||| Sbjct 3334407 GCCGTACACATCCAATATCTACCAACGCAGAGTCCTTGCTGGCGAGTTCCAGGTCGTCAA 3334348 Query 76627 CAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGA--- 76683 | ||| | || || || | || || | ||||| | | |||||| | Sbjct 3334347 CCCTTGGCTCCTAAAGGATCTGGTTGACATGGGCTTGTGGTCTGACGCCATGAAGAACCG 3334288 Query 76684 TCTCA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCA 76742 | ||| || ||||| | || ||| | || || || || | ||||| | ||||||| Sbjct 3334287 TATCATTGCTGAAAAC----GGCTCCGTCCAGAACATTCCAAACATCCCCGCAGATATCA 3334232 Query 76743 AGAATCTCTACCGCACAGTGTGGGAAATC---AAGATGAAAGATGTCATTGACATGGCCG 76799 | |||||| || || ||||||||| || | | |||| | ||||| | Sbjct 3334231 AAGCCCTCTACAAGACTGTCTGGGAAATCTCACAGCGTACTGTTGTC---CAGATGGCTG 3334175 Query 76800 CAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGA--ATCTATTCATGGAAAGT 76855 | || || ||| ||||||||||| |||| ||| ||| ||| || ||| || Sbjct 3334174 CCGACCGCGGTGCCTTCATTGATC--AGTCTCAGTCCTTGAACATCCAT--ATGAAAGAC 3334119 Query 76856 CCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACC 76915 || || ||| |||| || | |||||| | || ||||| | || || || ||| Sbjct 3334118 CCGACTATGGGCAAGATCACCAGCATGCATTTCGCCGGCTGGAAGCTCGGTCTTAAGACC 3334059 Query 76916 GGAATGTACTATCTCCG 76932 ||||||||||| ||||| Sbjct 3334058 GGAATGTACTACCTCCG 3334042 >seq3 Length=2371949 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/198 (72%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGTCTCGCTCCTTCGCCGAG 65079 |||||||| | ||||| || |||| || |||| |||||| ||||||| | Sbjct 2245538 AAGAAGGCTGACTGGGCCATTCGATGGATTACCGACAAGAAGTCTA---CCTTCGCTCAA 2245482 Query 65080 CGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTAT 65138 || ||| |||| || || || || |||||||||||| ||| | || ||| | || Sbjct 2245481 CGTCTTGTTGCCTTCGCTGCCGTCGAAGGTATCTTCTTCAGCGGTGCCTT-TGCTTCCAT 2245423 Query 65139 TTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTC 65198 | |||||||||||||| || ||||||||||| || ||||| || || || || || Sbjct 2245422 CTTCTGGTTGAAGAAGCGTGGCCTCATGCCAGGTCTCACATTCTCCAACGAGCTCATCTC 2245363 Query 65199 CCGAGATGAGGGTCTCCA 65216 ||||| ||||||||||| Sbjct 2245362 GCGAGACGAGGGTCTCCA 2245345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569331543680