Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq18 150 5e-31
seq12 129 2e-24
>seq18
Length=3787933
Score = 150 bits (166), Expect = 5e-31
Identities = 197/273 (72%), Gaps = 0/273 (0%)
Strand=Plus/Plus
Query 302571 GTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGC 302630
|||||||| | ||||| | ||| ||||| || ||||||||| | |||||| || ||
Sbjct 1857601 GTCTTCCAGAGCCTTGACGAGACGGCGCTGGATGTAACCAGTTTCGGCTGTTTTCACGGC 1857660
Query 302631 TGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAG 302690
|| || || ||||| | | ||| |||| || |||||||| | ||| |||| ||
Sbjct 1857661 CGTGTCGATGAGACCTTCTCTTCCAGCCATGGCGTGGAAGAAGAACTCGCTCGGTGTCAG 1857720
Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750
|| | | | | || | |||||||||||||| ||||||||||||| ||| ||||||
Sbjct 1857721 GCCTCGTAGATAAGAATTTTCAACGAAACCACGAGCCTCGGGCGAATAGTCATCCTTGGT 1857780
Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810
||||| |||||||| | | || | ||| | ||||||||||| || || ||| ||||
Sbjct 1857781 GAAGTGAGGCAGGGTGCGATACTTGAATCCGAAAGGGATACGCTTGCCCTCCACGATCTG 1857840
Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
||| || | | | | ||||||| ||||| ||
Sbjct 1857841 CTGACCGACGAGAGCAGTCATCTGGGAAATGTT 1857873
>seq12
Length=4789767
Score = 129 bits (142), Expect = 2e-24
Identities = 297/442 (67%), Gaps = 4/442 (1%)
Strand=Plus/Plus
Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119
|||||||| ||||| ||||| |||||||| ||||||||||| | ||||| ||||| | |
Sbjct 3335392 TTGCCACCTTGATCCACATAACGAGCAGTGTTATTGAAGACTCGCAGCATGGGAATGACA 3335451
Query 156120 CCATTGGAAGTGCCATTGGT-TCCGCGAATATGCGAACCAGATGAGCGAACATTATGAAT 156178
|| ||||||||||||||||| ||||| || | ||||| | | || | | || ||
Sbjct 3335452 CCGTTGGAAGTGCCATTGGTGCCCGCG-ATGTATGAACCGGTGGCACGGATACGGTGGAT 3335510
Query 156179 ATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCATTCCTTTACAGTATTGA 156237
| || ||||||||||| | |||| || || || || || ||| | || | |
Sbjct 3335511 GTTGAGGCCAATACCACCAG-CCATCTTGGAGATCATTGCACAGGTCTTGAGGGTGTCGT 3335569
Query 156238 AAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTC 156297
|||| || ||||| ||||| | ||| | ||| |||| ||| | |||||
Sbjct 3335570 AAATGCCCTCAATGCTGTCATCCTTCATGTCGACTAGGAAGCATGAAGACAGTTGAGCCT 3335629
Query 156298 GTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATAT 156357
| || || || || ||||| || || || | ||||| | ||| |||| | |||||
Sbjct 3335630 GAGGGGTGCCCGCATTGAAGAGGGTTGGCGAGGCATGTGTGAAAAACTTGCTGGACATCA 3335689
Query 156358 AATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCA 156417
| | ||| || || | | ||||| ||| || |||| || || || | ||
Sbjct 3335690 AGTTGTAGGTTTCAATGACTCGCTCAACATTGTCTCCCCAGATACCGACAGCAACACGCA 3335749
Query 156418 TCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTT 156477
| ||| ||||| || ||||| || ||| ||||||| | || ||||| | | |
Sbjct 3335750 TGATCATGTGCTGGGGTCGCTCAACGATCTTGCCATCAAGTTTAAGGAGGTAGGATCTCT 3335809
Query 156478 CCAGAGTTTTAAACCCGAAATA 156499
| | |||||| || ||||||||
Sbjct 3335810 CTAAAGTTTTGAAACCGAAATA 3335831
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816921124132
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |