Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02- 10] 36 sequences; 42,868,360 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 4e-12 >seq1 Length=5257612 Score = 89.7 bits (98), Expect = 4e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131168 ATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGA 131227 || ||| |||| |||||||| || || || || ||||| || |||| ||||||||| || Sbjct 3276850 ATCAAAGTTGTCGTAGCCACCATCGCGTTCGGAATGGGAATCGATAAGCCGGATGTTCGA 3276909 Query 131228 GTTGTTATTCATTACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGA 131287 |||| || ||| ||| ||| |||| | ||||||||||| ||||| | || || Sbjct 3276910 TTTGTCATACATCACGCTCTTCCGAAGAGCTTAGAAGGTTATTACCAAGAGACCGGCCGA 3276969 Query 131288 GCAGGTCGTGATGG 131301 || ||||| ||||| Sbjct 3276970 GCTGGTCGAGATGG 3276983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740628632552136