Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq12 217 1e-51
seq35 122 8e-23
seq33 114 1e-20
>seq12
Length=4789767
Score = 217 bits (240), Expect = 1e-51
Identities = 997/1553 (64%), Gaps = 69/1553 (4%)
Strand=Plus/Plus
Query 148260 TTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGT 148319
|| || ||||| |||||||| || || || | || | || | ||| || ||||
Sbjct 3334348 TTGACGACCTGGAACTCGCCAGCAAGGACTCTGCGTTGGTAGATATTGGATGTGTACGGC 3334407
Query 148320 TCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACC 148379
||||| |||||||||| ||||| ||||| | || | || || ||||| |||||
Sbjct 3334408 TCAAAGCACTCGTTGTTACCCAAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACT 3334467
Query 148380 AGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAG 148439
||||| |||||| | || | || |||| |||||| | |||||||||||
Sbjct 3334468 AGCAGACTGTTGCGAATGCCATGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCCAA 3334527
Query 148440 AGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCG-GCTAGCGGGGCT 148498
|| || || |||| ||||||||||| ||||||||||||| | | || | ||
Sbjct 3334528 AGATCGGAAGGCTTCACATTCCACATGTCAAACTGCAGAATGCCTTGAGATA-CAGGAGA 3334586
Query 148499 GCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGC 148558
||| ||||| | | ||| || || ||| || || || || | || ||| ||
Sbjct 3334587 GCCTTCGTATGTGGAGTATGGGCCTTGCTCCTTGGCAAGCTCCATGGAAGCAGTGAGAGC 3334646
Query 148559 GCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGC---AGCGCCGC-CGACTCGCTTT 148614
| | | |||||| ||||| || ||| |||| ||| | ||| | || | |
Sbjct 3334647 GGCATGGTAAATTGTCTCAAATATCTGCTTGTTCAGCTCTCGTGCCTCAGGAGAC----T 3334702
Query 148615 CGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGG 148674
|| | |||| || || | ||||| || ||||| ||||| ||||| || |||||||
Sbjct 3334703 CGAAAGGCAGGCGAAGGGCTAGGAACGCATCTGCAAGACCCTGAACGCCGACACCAATGG 3334762
Query 148675 GCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGATAGTGGTTGCGGTCGATG 148733
||| ||| |||||| | | || || || | || |||| |||| |||||||
Sbjct 3334763 GCCTGTGGCGCATGTTGCTGTTCTGTGC-TTCCGGAACGGGGTAGTAGTTGACGTCGATG 3334821
Query 148734 ATCTT-GTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCGTA 148792
||||| ||||| || || || || || | |||| | ||||| || || || ||
Sbjct 3334822 ATCTTATTCAAG-TTTCGAACAACAACTTCGGTAACATCGTGCAGCTTTTGGAAGTCATA 3334880
Query 148793 ---------CTTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACAC 148843
|||| || || | | | ||| || ||| | || || | ||||| ||
Sbjct 3334881 GCAGCCTTCATTGTAGTCCACAAAGGA-CGG--CAAGGCCAGCGAAGCCAAGTTGCAGAC 3334937
Query 148844 GGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGAT 148903
||| |||||| ||||||| |||||| | |||||| | ||| |||||| || |||
Sbjct 3334938 GGCGACCTCATCGGGGGCGCAGTACTCGATGATCTCCGTGCAGAGATTGGAGCTGCGGAT 3334997
Query 148904 CACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGG 148963
||| | ||||| || |||||||||| ||||| || || ||||| |||||| | ||
Sbjct 3334998 GGTGCCAAGATTCTTCTGGTTGCTCTTGCGATTGCAAGCATCTTTGTAGAGCATGAAAGG 3335057
Query 148964 TCCGCCAGTTTCCACCTGCGTTTCCACTATG---AACCGATGCAGGTCCTGCGCGCGCAC 149020
|| ||||| ||| | || | ||| ||| | || | ||| || |
Sbjct 3335058 GTTTCCGGTTTCAGTCTGGGCCTCTAGGATGGCATACCAA---AGCTTCTGTGC-----C 3335109
Query 149021 TTGCTGCTCGTAGCGACCCT------CCTGCTCGTA--TAAAGTATACAGCCGCTCGAAC 149072
||| || || | |||||||| || ||| || | ||| | ||| |||||||
Sbjct 3335110 TTGATGGTC-TTGCGACCCTTGTTGAGCTTCTCATACTTTTCGTAGAGAGC--CTCGAAC 3335166
Query 149073 GCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACG 149132
| || |||||||| || | || ||||| || | || || ||||| || | ||| ||
Sbjct 3335167 TCGTCACCGTAGCAGTCAGCCAGGCCGGGACATTCGTTGGGACACATCAGAGTCCAATCG 3335226
Query 149133 CCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCG 149192
|||| | | || |||||||| || ||||| || | ||| || ||| | ||| ||
Sbjct 3335227 CCGTTCTTTTCAACACGCTTCATGAAGAGATCAGGAATCCACAGGGCGAGGAAGAGATCA 3335286
Query 149193 CGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGA-GCACGCTGAATATGTC 149251
|| || ||||| ||| ||| || |||| | | || | ||| | |||
Sbjct 3335287 CGTGCGCGAACTTCTTCCTTGCCATGGTTCTTTCGGAGGTCCATGAACTC-GAACACGTC 3335345
Query 149252 CGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGCCCTGGTC 149308
||| ||||| ||||||| ||| | |||| ||||| |||| ||||| || || ||
Sbjct 3335346 CGCATGCCAAGGCTCAAGGTAGATTGCGAAAGCGCCTGGGCGCTTGTTGCCACCTTGATC 3335405
Query 149309 GACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCAC---TGGCAGT 149365
|| | || | |||| || || ||||| | ||| || |||| ||| ||| |||
Sbjct 3335406 CACATAACGAGCAGTGTTATTGAAGACTCGCAGCATGGG---AATGACACCGTTGGAAGT 3335462
Query 149366 GCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGAT 149425
||| || || ||| ||| || || | ||| | ||||| ||| ||
Sbjct 3335463 GCCATTGGTGCCCGCGATGTATGAACCGGTGGCACGGATACGGTGGATGTTGAGGCCAAT 3335522
Query 149426 GCCGCC-GCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCCTCGA 149484
|| || ||| | ||| ||||| || ||| ||| || ||| |||||||| |
Sbjct 3335523 ACCACCAGCCAT-CTTGGAGATCATTGCACAGGTCTTGAGGGTGTCGTAAATGCCCTCAA 3335581
Query 149485 TGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGG 149544
||||||| ||||||| | || ||||| || ||| ||| | | | ||||| |
Sbjct 3335582 TGCTGTCATCCTTCATGTCGACTAGGAAGCATGAAGACAGTTGAGCCTGAGGGGTGCCCG 3335641
Query 149545 CCGCGAACATGGTGGGGCTGGCGTGTGT-AAAATATTTCTGGCTCATCATCTCGTACGAC 149603
| ||| | ||| || ||| ||||| |||| || |||| ||||| | ||| |
Sbjct 3335642 CATTGAAGAGGGTTGGCGAGGCATGTGTGAAAAACTTGCTGG-ACATCAAGTTGTAGGTT 3335700
Query 149604 TCGAGCACGCGGTCCA---TGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATA 149660
|| | || || || | |||| || ||| ||| || | || || ||||| | |||
Sbjct 3335701 TCAATGACTCGCTCAACATTGTC-TCCCCA--GATACCGACAGCAACACGCATGATCATG 3335757
Query 149661 TGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTGTC 149720
||||| |||||||| | | ||| ||| ||| || | |||| | |||| ||
Sbjct 3335758 TGCTGGGGTCGCTCAACGATCTTGCCATCAAGTTTAAGGAGGTAGGATCTCTCTAAAGTT 3335817
Query 149721 TTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTC 149773
||| | || || || | ||||| ||||| ||| | | ||||||||| |||
Sbjct 3335818 TTGAAACCGAAATATTGGTAGTTGAAGTCTCGGTCATACACAATGGCGGAGTC 3335870
>seq35
Length=2560152
Score = 122 bits (134), Expect = 8e-23
Identities = 148/200 (74%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521
|| ||||| ||||| || |||||||| | || || || ||||||||||||||||
Sbjct 153137 GTCGACTCCTTCTGAATGTTGTAATCAGATAGGGTTCGGCCG--TCCTCGAGCTGCTTGC 153194
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || | ||||| ||||| || |||||||| |||||||| |||||| ||
Sbjct 153195 CGGCGAAGATCAATCGCTGTTGGTCTGGCGGGATGCCCTCCTTGTCTTGGATCTTGGACT 153254
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | ||||||| | |||||| |||| ||||| || || || || || |
Sbjct 153255 TGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTCCCCGTAAGGG 153314
Query 133642 TTTTTACGAAAATCTGCATG 133661
|||| ||||| |||||||||
Sbjct 153315 TTTTGACGAAGATCTGCATG 153334
>seq33
Length=3634720
Score = 114 bits (126), Expect = 1e-20
Identities = 150/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| ||||| ||||| || ||||| || | ||| ||| |||||| | ||
Sbjct 1474271 ATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTTCGACC-GTCCTCCAACT 1474329
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||||||| | ||||| ||||||||||| || |||||||| |||||||| ||||
Sbjct 1474330 GCTTGCCCGCGAAGATGAGTCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCTTGAATCT 1474389
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | || | || |||| | ||| || |||| |||| || |||||||
Sbjct 1474390 TGGACTTTACGTTATCGATGGTATCGGATGACTCAACCTCGAGAGTGATCGTCTTGCCGG 1474449
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
| || || || ||||| ||||||||
Sbjct 1474450 TGAGGGTCTTGACGAAGATCTGCAT 1474474
Score = 109 bits (120), Expect = 5e-19
Identities = 117/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||||||||||||||| ||| | || | ||||||||||| || ||||| || ||||||
Sbjct 1474548 TCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGGATTCCCTCCTTG 1474607
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||||| | || | || || | | ||| || || | ||||| |
Sbjct 1474608 TCCTGGATCTTCGACTTGACGTTGTCGATGGTATCCGAAGACTCGACCTCAAGGGTGATG 1474667
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| |||||||| || || |||||||| ||||||||
Sbjct 1474668 GTCTTGCCGGTGAGGGTCTTTACGAAGATCTGCAT 1474702
Score = 86.0 bits (94), Expect = 6e-12
Identities = 129/181 (71%), Gaps = 2/181 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||| ||||| || ||||| ||| | || | | | ||||||||||
Sbjct 1474727 ATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCA-TCCTCGAGCT 1474785
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| || | || || ||||||||||| || || || || |||||||| |||||
Sbjct 1474786 GCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCT 1474845
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||||| | || | || || | | |||||| || | ||||| ||| || || |
Sbjct 1474846 TCGACTTGACGTTGTCGATAGTATCCGAAGACTCCACCTCAAGGGTGATGGTCTTTCCAG 1474905
Query 133636 T 133636
|
Sbjct 1474906 T 1474906
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420582460640
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