Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq3 91.5 3e-13
>seq3
Length=2371949
Score = 91.5 bits (100), Expect = 3e-13
Identities = 152/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 131787 TTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTA 131846
||||||| || | |||||| || || ||||| ||| ||||||| || | |||
Sbjct 2245552 TTCCTGCCATCAGAAAGAAGGCTGACTGGGCCATTCGATGGATTACCGACAAGAAGTCTA 2245493
Query 131847 ATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTT 131906
|| || | | ||||| || || ||| || |||||||| ||||| ||||| |
Sbjct 2245492 CCTTCGCTCAACGTCTTGTTGCCTTCGCTGCCGTCGAAGGTATCTTCTTCAGCGGTGCCT 2245433
Query 131907 TCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATC 131966
| | | ||||| ||| | ||||||||||| | ||||| || ||| |||| |||||
Sbjct 2245432 TTGCTTCCATCTTCTGGTTGAAGAAGCGTGGCCTCATGCCAGGTCTCACATTCTCCAACG 2245373
Query 131967 AATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006
| |||||||| |||| || | | |||||||| || ||
Sbjct 2245372 AGCTCATCTCGCGAGACGAGGGTCTCCATACTGATTTCGC 2245333
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812252582596
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |