Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02- 10] 36 sequences; 42,868,360 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 3e-13 >seq3 Length=2371949 Score = 91.5 bits (100), Expect = 3e-13 Identities = 152/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 131787 TTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTA 131846 ||||||| || | |||||| || || ||||| ||| ||||||| || | ||| Sbjct 2245552 TTCCTGCCATCAGAAAGAAGGCTGACTGGGCCATTCGATGGATTACCGACAAGAAGTCTA 2245493 Query 131847 ATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTT 131906 || || | | ||||| || || ||| || |||||||| ||||| ||||| | Sbjct 2245492 CCTTCGCTCAACGTCTTGTTGCCTTCGCTGCCGTCGAAGGTATCTTCTTCAGCGGTGCCT 2245433 Query 131907 TCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATC 131966 | | | ||||| ||| | ||||||||||| | ||||| || ||| |||| ||||| Sbjct 2245432 TTGCTTCCATCTTCTGGTTGAAGAAGCGTGGCCTCATGCCAGGTCTCACATTCTCCAACG 2245373 Query 131967 AATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006 | |||||||| |||| || | | |||||||| || || Sbjct 2245372 AGCTCATCTCGCGAGACGAGGGTCTCCATACTGATTTCGC 2245333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812252582596