Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq3 104 3e-16
seq12 91.5 2e-12
>seq3
Length=2371949
Score = 104 bits (114), Expect = 3e-16
Identities = 207/303 (68%), Gaps = 13/303 (4%)
Strand=Plus/Minus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || |||||||| || ||||| |||||||| |||||| | || |
Sbjct 2245943 GATTTGGCAAATGTAC-AAGAAGGCCGAAGCGTCCTTCTGGACCGCTGAGGAGATTGATC 2245885
Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTC 1455887
| | || |||| | ||| | | | |||||||||| | |||
Sbjct 2245884 TGTCCAAGGATCTTCACGAT----TGGAACAACAAGATCAACGACGACGAGAAATACTTC 2245829
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
||| ||| | | ||||| || |||||| ||||||||||| |||||| || |
Sbjct 2245828 ATCTCACACATTTTGGCCTTCTT-CGCCGCGTCTGATGGCATCGTCAACGAGAATCTCGT 2245770
Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007
|| | || | | |||||||| | || ||||| || | || ||||| ||||||||
Sbjct 2245769 CGAGAGATTCAGCAGCGAGGTCCAGATCCCTGAGGCTCGCTGCTTCTACGGCTTCCAGAT 2245710
Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
|| || ||||||||||| || || ||||| || || |||||||| || |||||||
Sbjct 2245709 TATGATGGAGAACATCCACTCGGAGACATACTCTCTGCTCATCGACACATATATCAAGGA 2245650
Query 1456068 CCC 1456070
||
Sbjct 2245649 GCC 2245647
>seq12
Length=4789767
Score = 91.5 bits (100), Expect = 2e-12
Identities = 258/392 (66%), Gaps = 17/392 (4%)
Strand=Plus/Minus
Query 259791 TCGTCGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCG 259850
|||| ||||| |||||| | ||| |||||||||| || | || | |||| |
Sbjct 3335776 TCGTTGAGCGACCCCAGCACATGATCATGCGTGTTGCTGTCGGTA--TCTGGG------G 3335725
Query 259851 ACGTCGACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCA-GTTG 259909
| ||||||| | |||| || | | |||||| | ||||| ||||| |||
Sbjct 3335724 A----GACAATG---TTGAGCGAGTCATTGAAACCTACAACTTGATGTC-CAGCAAGTTT 3335673
Query 259910 TTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCG 259969
||||| || |||| || ||||| ||||| ||||| || | | || || ||
Sbjct 3335672 TTCACACATGCCTCGCCAACCCTCTTCAATGCGGGCACCCCTCAGGCTCAACTGTCTTCA 3335613
Query 259970 TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAG 260029
||||| || | |||||||||| || || |||||||| || ||||| ||||||
Sbjct 3335612 TGCTTCCTAGTCGACATGAAGGATGACAGCATTGAGGGCATTTACGACACCCTCAAGACC 3335553
Query 260030 TGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCC 260089
|| || | ||||||||| ||| || || || || | | ||| | || |||
Sbjct 3335552 TGTGCAATGATCTCCAAGATGGCTGGTGGTATTGGCCTCAACATCCACCGTATCCGTGCC 3335493
Query 260090 GCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGC 260149
| || | ||| | ||||||||||| ||| |||||||| | | |||||||| ||
Sbjct 3335492 ACCGGTTCATACATCGCGGGCACCAATGGCACTTCCAACGGTGTCATTCCCATGCTGCGA 3335433
Query 260150 GTTTTTAACGACACGGCGCGCTACGTCGACCA 260181
|| || || |||| || || || || || ||
Sbjct 3335432 GTCTTCAATAACACTGCTCGTTATGTGGATCA 3335401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177807727733832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |