Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq12 174 2e-38
>seq12
Length=4789767
Score = 174 bits (192), Expect = 2e-38
Identities = 1175/1876 (63%), Gaps = 55/1876 (3%)
Strand=Plus/Plus
Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433
|| ||||| ||||| | | || | || ||||| || |||||||| ||||| || |||
Sbjct 3334009 GTGAACTGGATGGGCGCAGCCGCTGCTTGAGTACGGAGGTAGTACATTCCGGTCTTAAGA 3334068
Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493
|| || |||| ||| ||||||||| || || | ||| | | || || |||
Sbjct 3334069 CCGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTGCCCATAGTCGGGTCTTTCATA 3334128
Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553
|| || |||| || ||| ||||| ||||| || || | || || ||||| | | |
Sbjct 3334129 TGGATGTTCAAGGACTGAGACTGATCAATGAAGGCACCGCGGTCGGCAGCCATCTGGACA 3334188
Query 68554 A---TACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGA 68610
| ||| || | ||| |||||||| | |||||| | | ||||||||| | ||
Sbjct 3334189 ACAGTACGCTGT-GAG--ATTTCCCAGACAGTCTTGTAGAGGGCTTTGATATCTGCGGGG 3334245
Query 68611 AGGCTCGTA---TTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCA 68667
| | | | | || || | ||| || || | || || ||||| || | |||
Sbjct 3334246 ATGTTTGGAATGTTCTGGACGGAGCCGTTTTCAGCAATGATACGGTTCTTCATGGCGTCA 3334305
Query 68668 TTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCC 68727
|||||| | || | | | | ||||| || || || | || || ||
Sbjct 3334306 GACCACAAGCCCATGTCAACCAGATCCTTTAGGAGCCAAGGGTTGACGACCTGGAACTCG 3334365
Query 68728 CCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTT 68787
|||| | ||||| || ||| ||||| || || || || | | || || ||
Sbjct 3334366 CCAGCAAGGACTCTGCGTTGGTAGATATTGGATGTGTACGGCTCAAAGCACTCGTTGTTA 3334425
Query 68788 CCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGA 68847
|||| || || | ||| || || ||||| ||||| || | | ||| || | ||
Sbjct 3334426 CCCAAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACTAGCAGACTGTTGCGAATG 3334485
Query 68848 CCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACA 68907
||||| | |||||| || || || | ||| ||||||||||| || || |||
Sbjct 3334486 CCATGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCCAAAGATCGGAAGGCTTCACA 3334545
Query 68908 TTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAA 68967
||||| | || | || ||||| || | | | || || || | ||||| ||
Sbjct 3334546 TTCCACATGTCAAACTGCAGAATGCCTTGAGATACAGGAGAGCCTTCGTATGTGGAGTAT 3334605
Query 68968 GGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCG 69027
|| |||| || | || || || || | || | | |||||||| ||
Sbjct 3334606 GGGCCTTGCTCCTTGGCAAGCTCCATGGAAGCAGTGAGAGCGGCATGGTAAATTGTCTCA 3334665
Query 69028 AAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATA 69087
|| |||| ||| || || ||| |||| || || ||||| || | | || | ||
Sbjct 3334666 AATATCTGCTTGTTCAGCTCTCGTGCCTCAGGAGACTCGAAAGGC--AGGCGAAGGGCTA 3334723
Query 69088 --AATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATT--TGA 69143
|| |||||||| | |||||||| || | ||| || || || || | | | || ||
Sbjct 3334724 GGAACGCATCTGCAAGACCCTGAACGCCGACACCAATGGGCCTGTGGCGCATGTTGCTGT 3334783
Query 69144 ACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGAC 69203
|| | ||||| |||| || || || || | || || || ||||| | ||||| ||
Sbjct 3334784 TCTGT--GCTTCCGGAACGGGGTAGTAGTTGACGTCGATGATCTTATTCAAGTTTCGAAC 3334841
Query 69204 TACTACTT---TAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATC--TATA--- 69255
|| |||| |||| ||| | || || | || ||| | | || || | ||
Sbjct 3334842 AACAACTTCGGTAACATCGTGC---AGCTTTTGGAAGTCATAGCAGCCTTCATTGTAGTC 3334898
Query 69256 -ACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGC 69314
||||| || || | || || | || || || || ||||||| | ||
Sbjct 3334899 CACAAAGGACGGCAAGGCCAGCGAAGCCAAGTTGCAGACGGCGACCTCATCGGGGGC-GC 3334957
Query 69315 A-TATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGAT 69373
| || | || ||||| || || ||||| | ||| || || ||||| | ||| |
Sbjct 3334958 AGTACTCGATGATCTCCGTGCAGAGATTGGAGCTGCGGATGGTGCCAAGATTCTTCTGGT 3335017
Query 69374 TACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAG 69433
| ||||| || || || || ||||| || || || || | || |||||| |||| |
Sbjct 3335018 TGCTCTTGCGATTGCAAGCATCTTTGTAGAGCATGAAAGGGTTTCCGGTTTCAGTCTGGG 3335077
Query 69434 ATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTCT- 69492
|| | || | | ||||| | || || || ||||||| || ||| |
Sbjct 3335078 CCTCTAGGATGGCATACCAAAGCTTCTGTGCCTTGAT---GGTCTTGCGACCCTTGTTGA 3335134
Query 69493 --TTTTCATATTGT--GTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCC 69548
|| ||||| | | ||| | |||| ||||| || || || | ||| ||| ||
Sbjct 3335135 GCTTCTCATACTTTTCGTAGAGAGCC--TCGAACTCGTCACCGTAGCAGTCAGCCAGGCC 3335192
Query 69549 AGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTT---AACTCGTTTCAT 69605
|||||||| || |||||||||| | ||| ||| | | ||| ||| || |||||
Sbjct 3335193 GGGACATTCGTTGGGACACATCAGAGTCCA---ATCGCCGTTCTTTTCAACACGCTTCAT 3335249
Query 69606 AAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCC 69665
|| ||||| |||||||| || || | |||||||| | | | | |||||| || ||
Sbjct 3335250 GAAGAGATCAGGAATCCACAGGGCGAGGAAGAGATCACGTGCGCGAACTTCTTCCTTGCC 3335309
Query 69666 TGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 69725
|| ||| || || | ||||| | | || | |||||| || || || || ||
Sbjct 3335310 ATGGTTCTTTCGGAGGTCCATGAACTCGAACACGTCCGCATGCCAAGGCTCAAGGTAGAT 3335369
Query 69726 CGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATA 69785
|| | | || || || || || || || ||||| | || | ||||||||||| |
Sbjct 3335370 TGCGAAAGCGCCTGGGCGCTTGTTGCCACCTTGATCCACATAACGAGCAGTGTTATTGAA 3335429
Query 69786 GACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCC 69845
||||| |||||| ||||| | ||| || || | ||||| || || | || || ||
Sbjct 3335430 GACTCGCAGCATGGGAATGACACCGTTGGAAGTGCCATTGGTGCCCGCGATGTATGAACC 3335489
Query 69846 TCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGC 69905
| || || ||| || || || || || || ||||| || ||||| | ||
Sbjct 3335490 GGTGGCACGGATACGGTGGATGTTGAGGCCAATACCACCAGCCATCTTGGAGATCATTGC 3335549
Query 69906 ACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAA 69965
||| || | ||||| || || ||||| ||||| ||||| |||||| | || ||
Sbjct 3335550 ACAGGTCTTGAGGGTGTCGTAAATGCCCTCAATGCTGTCATCCTTCATGTCGACTAGGAA 3335609
Query 69966 ACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGT 70025
|| ||||| |||| || || |||||||| || | || || || || || ||
Sbjct 3335610 GCATGAAGACAGTTGAGCCTGAGGGGTGCCCGCATTGAAGAGGGTTGGCGAGGCATGTGT 3335669
Query 70026 GAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATAT----CCCACT 70081
||| | || || | || ||||| |||||||| || || | || || |
Sbjct 3335670 GAAAAACTTGCTGGACATCAAGTTGTAGGTTTCAATGACTCGCTCAACATTGTCTCCCCA 3335729
Query 70082 GATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTAT 70141
| || || | || |||||||| | ||| ||||| ||||| || || | || ||
Sbjct 3335730 G----ATACCGACAGCAACACGCATGATCATGTGCTGGGGTCGCTCAACGATCTTGCCAT 3335785
Query 70142 TTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGT 70201
| ||| | ||||| ||| | || | |||||| || || ||||| | ||| ||||
Sbjct 3335786 CAAGTTTAAGGAGGTAGGATCTCTCTAAAGTTTTGAAACCGAAATATTGGTAGTTGAAGT 3335845
Query 70202 CTCTTTCGTAAATAAT 70217
||| || || | |||
Sbjct 3335846 CTCGGTCATACACAAT 3335861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908490891040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |