Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq12 172 7e-38
seq3 109 7e-19
seq15 82.4 9e-11
>seq12
Length=4789767
Score = 172 bits (190), Expect = 7e-38
Identities = 1174/1865 (63%), Gaps = 75/1865 (4%)
Strand=Plus/Plus
Query 117798 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 117857
|||| | ||||||| ||||| ||| || | | |||||||||||||| || |||
Sbjct 3334003 TCAACGGTGAACTGGATGGGCGCAGCCGCTGCTTGAGTACGGAGGTAGTACATTCCGGTC 3334062
Query 117858 TTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTT 117917
|| || || |||||||| | | |||||| || | |||| | || || |
Sbjct 3334063 TTAAGACCGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTGCCCATAGTCGGGTCT 3334122
Query 117918 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATA 117977
| ||| || ||||| || || ||||| |||||| || || || || |||||
Sbjct 3334123 TTCATATGGATGTTCAAGGACTGAGACTGATCAATGAAGGCACCGCGGTCGGCAGCCATC 3334182
Query 117978 TCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCT 118037
| | ||| | ||||||||| |||||| |||||||| || ||||| |
Sbjct 3334183 TGGACAACAGTACGCTGTGAGATTTCCCAGACAGTCTTGTAGAGGGCTTTGATATCTGCG 3334242
Query 118038 GGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCA-TGAGA---TCCTTCAT 118093
||||| | || || |||| ||| || | || | || ||| | | ||||||
Sbjct 3334243 GGGATGTTTGGAATGTTCTGGACGGAGCC----GTTTTCAGCAATGATACGGTTCTTCAT 3334298
Query 118094 ATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAAC 118153
| | ||||| | || || | ||||||| | ||| ||||| ||
Sbjct 3334299 GGCGTCAGACCACAAGCCCATGTCAACCAGATCCTTTAGGAGCCAAGGGTTGACGACCTG 3334358
Query 118154 AAACTCACCCGCGAGGG---TGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCA 118210
||||| || || ||| ||||| | |||||||||| ||||| |||||||||||
Sbjct 3334359 GAACTCGCCAGCAAGGACTCTGCGTT---GGTAGATATTGGATGTGTACGGCTCAAAGCA 3334415
Query 118211 CTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCT 118270
||| |||||||||||||| |||| || ||| || ||||| ||||| | || || ||
Sbjct 3334416 CTCGTTGTTACCCAAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACTAGCAGACT 3334475
Query 118271 GTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGC-T 118329
||| || | || | || | || | ||||| || | ||||||| | || |
Sbjct 3334476 GTTGCGAATGCCATGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCCA-AAGATCGG 3334534
Query 118330 TTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAA 118389
| || | | | |||||| |||||||| || || ||||| || | || || || ||
Sbjct 3334535 AAGGCTTCACATTCCACATGTCAAACTGCAGAATGCCTTGAGATACAGGAGAGCCTTCGT 3334594
Query 118390 ATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGAT 118449
|||| |||||||| | ||| || | || | || ||| || || || |
Sbjct 3334595 ATGTGGAGTATGGGCCTTGCTCCTTGGCAAGCTCCATGGAAGCAGTGAGAGCGGCATGGT 3334654
Query 118450 ACATTGTTTCAAAAATGCGAGCATTCATTGC-CTTG-GCCTCGTCGGAATCAAACGCGAG 118507
| ||||| ||||| || | |||| || || | ||||| || || || | ||
Sbjct 3334655 AAATTGTCTCAAATATCTGCTTGTTCA--GCTCTCGTGCCTCAGGAGACTCGAAAGGCAG 3334712
Query 118508 TCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCT 118567
|| | || |||| || ||||| || || |||| ||||| || | || |
Sbjct 3334713 GCGAAGGGCTAGGAACGCATCTGCAAGACCCTGAACGCCGACACCAATGGGCCTGTGGCG 3334772
Query 118568 CATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAG 118627
||| || ||| | || | ||||| || | || ||||| | | |||| |
Sbjct 3334773 CATGTTGCTGTTCTGTGCTTCCGGAACGGGGTAGTAGTTGACGTCGATGATCTTATTCAA 3334832
Query 118628 ATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC 118687
||| ||||| | || | || || ||||||| | | ||| | | || |
Sbjct 3334833 GTTTCGAACAACAACTTCGGTAACATCGTGCAGCTTTTGGAAGTCATAGCAGC------C 3334886
Query 118688 TTCATTG------ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 118741
||||||| ||| | || | ||| | || |||| || || || | | |||
Sbjct 3334887 TTCATTGTAGTCCACAAAGGACGGCAAGGCCAGCGAAGCCAAGTTGCAGACGGCGACCTC 3334946
Query 118742 ATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAA 118801
||| | |||||| || || |||||||| | || || || |||||||| |
Sbjct 3334947 ATCGGGGGCGCAGTACTCGATGATCTCCGTGCAGAGATTGGAGCTGCGGATGGTGCCAAG 3335006
Query 118802 GTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGT 118861
||||| || || ||| || || ||||| ||||| |||||| | || | || ||
Sbjct 3335007 ATTCTTCTGGTTGCTCTTGCGATTGCAAGCATCTTTGTAGAGCATGAAAGGGTTTCCGGT 3335066
Query 118862 CTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGG 118920
|| || |||| || || || || | ||| | | || | || | ||| |||
Sbjct 3335067 TTCAGTCTGGGCCTCTAGGATGGCATACCAAAGCTTCTG----TGCCTTGATGGTCTTG- 3335121
Query 118921 CTCGCCCCT-------CTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACG 118973
|| |||| ||| ||| |||||| |||||| || || ||||| ||||| |
Sbjct 3335122 --CGACCCTTGTTGAGCTT-CTCATACTTTTCGTAGAGAGCCTCGAACTCGTCACCGTAG 3335178
Query 118974 GCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAAGAGAGACCATTGACCACCCTCCTC 119032
|| | || || || | || |||| || | |||| ||| | || || ||
Sbjct 3335179 CAGTCAGCCAGGCC-GGGACATTCGTTGGGACACATCAGAGTCCAATCGCCGTTCTTTTC 3335237
Query 119033 AACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGC 119092
||| |||||||||||||| || || ||||| || || ||||||||| || |||| |
Sbjct 3335238 AACACGCTTCATGAAGAGATCAGGAATCCACAGGGCGAGGAAGAGATCACGTGCGCGAAC 3335297
Query 119093 TTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGG 119152
|||||| | || || || || | |||| || || | | ||||| ||||| ||
Sbjct 3335298 TTCTTCCTTGCCATGGTTCTTTCGGAGGTCCATGAACTCGAACACGTCCGCATGCCAAGG 3335357
Query 119153 TTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCT 119206
|| ||||| | |||| | | ||| | || ||| | || | ||||| |
Sbjct 3335358 CTCAAGGTAGATTGCGAAAG-CGCCT--GGGCGCTTGTTGCCACCTTGATCCACATAACG 3335414
Query 119207 CGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CC 119265
|||||| || || || || ||||| ||||||| ||| | ||| |||||| || ||
Sbjct 3335415 AGCAGTGTTATTGAAGACTCGCAGCATGGGAATGACACCGTTGGAAGTGCCATTGGTGCC 3335474
Query 119266 CCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCC 119324
| ||| || || || |||| | || | |||||||| | |||||||| || |||
Sbjct 3335475 CGCGATGTATGA-AC-CGGTGGCACGGATACGGTGGATGTTGAGGCCAATACCACCAGCC 3335532
Query 119325 CACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCC 119384
||| ||||| || || | |||| || |||| || || || || |||| ||
Sbjct 3335533 ATCTTGGAGATCATTGCACAGGTCTTGAGGGTGTCGTAAATGCCCTCAATGCTGTCATCC 3335592
Query 119385 TTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAG 119443
|| | ||| |||||||| |||| |||| ||||| || || || || ||||||||
Sbjct 3335593 TTCATGTCGACTAGGAAGCATGAAGACAGTTGA-GCCTGAGGGGTGCCCGCATTGAAGAG 3335651
Query 119444 AGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTGTCGTAGGTCTCCAAGAC- 119500
||||| | || || ||| | | |||| ||||||| || |||||| || | |||
Sbjct 3335652 GGTTGGCGAGGCATGTGTGA--AAAACTTGCTGGACATCAAGTTGTAGGTTTCAATGACT 3335709
Query 119501 --GGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGT 119558
| | ||||| ||| | ||||||| | || ||||| | ||||| ||||||
Sbjct 3335710 CGCTCAACATTGTCTCCCCAG---ATACCGACAGCAACACGCATGATCATGTGCTGGGGT 3335766
Query 119559 GTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCA 119618
|| | | | ||||| || | ||||||| |||| || || |||| |||
Sbjct 3335767 CGCTCAACGATCTTGCCATCAAGTTTAAGGAGGTAGGATCTCTCTAAAGTTTTGAAACCG 3335826
Query 119619 AAATA 119623
|||||
Sbjct 3335827 AAATA 3335831
>seq3
Length=2371949
Score = 109 bits (120), Expect = 7e-19
Identities = 113/148 (76%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 130028 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 130087
|||||||||||||| || |||||||| || || ||||| |||||||||||||| ||
Sbjct 2245345 TGGAGACCCTCGTCTCGCGAGATGAGCTCGTTGGAGAATGTGAGACCTGGCATGAGGCCA 2245404
Query 130088 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 130147
||||||||||||||||| || | | ||| | || ||||||||| || || ||
Sbjct 2245405 CGCTTCTTCAACCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGATACCTTCGACGGCA 2245464
Query 130148 GCGAACGCAAAGAGACGCTCAGCAAAGG 130175
||||| |||| ||||| | ||| ||||
Sbjct 2245465 GCGAAGGCAACAAGACGTTGAGCGAAGG 2245492
>seq15
Length=4255712
Score = 82.4 bits (90), Expect = 9e-11
Identities = 155/223 (70%), Gaps = 4/223 (2%)
Strand=Plus/Minus
Query 14237 CCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTCA 14296
|||| ||||||||| ||||||||||| | ||| ||||| ||| | || || ||
Sbjct 2058888 CCGATGGCGTCAATCTCATCGATGAAGATGATGCATGGCGCATTCTTTCGTGCGGTAGCA 2058829
Query 14297 AAGATATCTCGCACTC-TCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGC 14355
|| | ||||||||||| |||| ||||| || || |||||||| ||||| | || |
Sbjct 2058828 AACAGATCTCGCACTCGGGATGGC-CCGACTCCGACGAACATCTCGACAAACTCGGAACC 2058770
Query 14356 G-GAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCT 14414
| ||| | || ||| || || ||||| || || | || ||| || || ||||
Sbjct 2058769 GCTCACACT-GAAGAACGGAACTCCTGATTCGCCTGCAGTAGCCTTGGCCAGCAGCGTCT 2058711
Query 14415 TCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGAT 14457
| || || || || ||| || |||| |||||| || |||||
Sbjct 2058710 TACCTGTTCCAGGGGGCCCGGCCAGAATGGCACCGCGAGGGAT 2058668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434921704160
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