Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq12 210 3e-49
seq3 96.9 4e-15
>seq12
Length=4789767
Score = 210 bits (232), Expect = 3e-49
Identities = 919/1438 (64%), Gaps = 41/1438 (3%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACA---TTGATTCT 104278
|| ||| ||||| ||||||| || || ||||||| |||||| |||| ||||
Sbjct 3335765 CCCCAGCACATGATCATGCGTGTTGCTGTCGGTATC--TGGGGA-GACAATGTTGAGCGA 3335709
Query 104279 GTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCC 104336
||| | || || ||| || ||||||| |||| | | ||| || || | |||||||
Sbjct 3335708 GTCATTGAAACCTACAACTTGATGTCCAGCAAGTTTT--TCACACATGCCTCGCCAACCC 3335651
Query 104337 TCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGG 104396
|||||||||| || || || | ||| |||| |||||||| ||| || ||||
Sbjct 3335650 TCTTCAATGCGGGCACCCCTCAGGCTCAACTGTCTTCATGCTTCCTAGTCGACATGAAGG 3335591
Query 104397 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGG 104456
| ||| || | || || || | || || | | ||||| ||||| ||| ||
Sbjct 3335590 ATGACAGCATTGAGGGCATTTACGACACCCTCAAGACCTGTGCAATGATCTCCAAGATGG 3335531
Query 104457 CTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGA 104516
|||| |||||||| | ||||||| | | | |||| || || ||| |
Sbjct 3335530 CTGGTGGTATTGGCCTCAACATCCACCGTATCCGTGCCACCGGTTCATACATCGCGGGCA 3335471
Query 104517 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 104576
| ||||| || | ||| | ||||| ||||| || || || || ||| || || |
Sbjct 3335470 CCAATGGCACTTCCAACGGTGTCATTCCCATGCTGCGAGTCTTCAATAACACTGCTCGTT 3335411
Query 104577 ATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCAT 104630
|||| |||||| ||| ||| | | || || ||||| |||| |||||||| |
Sbjct 3335410 ATGTGGATCAAGGTGGCAACAAGCGCCCA---GGCGCTTTCGCAATCTACCTTGAGCCTT 3335354
Query 104631 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGC 104690
|||| ||||| | | |||||| | || | || ||||| || | || || | |
Sbjct 3335353 GGCATGCGGACGTGTTCGAGTTCATGGACCTCCGAAAGAACCATGGCAAGGAAGAAGTTC 3335294
Query 104691 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750
| || ||||||||| ||| || |||||||| ||||||||||||||| | |||||
Sbjct 3335293 GCGCACGTGATCTCTTCCTCGCCCTGTGGATTCCTGATCTCTTCATGAAGCGTGTTGAAA 3335234
Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810
||| ||| ||||| |||| | ||||| || | || || || | || | |
Sbjct 3335233 AGAACGGCGATTGGACTCTGATGTGTCCCAACGAATGTCCCGGCCTGGCTGACTGCTACG 3335174
Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAG-----GAAGAA-GGTCGGGCGACTG 104864
|||| ||||| || || || ||| |||||| ||| || || ||||| |||
Sbjct 3335173 GTGACGAGTTCGAGGCTCTCTACGAAAAGTATGAGAAGCTCAACAAGGGTCGCAAGACCA 3335114
Query 104865 CGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 104924
| || ||| || | ||| | || || || || | || || || || || |
Sbjct 3335113 TCAAGG-CACAGAAGC-----TTTGGTATGCCATCCTAGAGGCCCAGACTGAAACCGGAA 3335060
Query 104925 CACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 104984
|| | |||||| |||||||| || || || | ||||| || || |||||| | ||
Sbjct 3335059 ACCCTTTCATGCTCTACAAAGATGCTTGCAATCGCAAGAGCAACCAGAAGAATCTTGGCA 3335000
Query 104985 TGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 105044
||| || ||||||||||| || || ||| | || | | | |||||| |
Sbjct 3334999 CCATCCGCAGCTCCAATCTCTGCACGGAGATCATCGAGTACTGCGCCCCCGATGAGGTCG 3334940
Query 105045 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC-- 105102
| || || ||| | || || | || | || | |||||| | | | | ||| |
Sbjct 3334939 CCGTCTGCAACTTGGCTTCGCTGGCCTTGCCGTCCTTTGTGGA-CTACA-ATGAAGGCTG 3334882
Query 105103 ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGT 105162
| ||| | |||| || ||||| ||||| || ||| |||| | || | |
Sbjct 3334881 CTATGACTTCCAAAAGCTGCACGATGTTACCGAAGTTGTTGTTCGAAACTTGAATAAGAT 3334822
Query 105163 TATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 105222
|| || || | ||||||||| | || | || || ||| | ||| | ||
Sbjct 3334821 CATCGACGTCAACTACTACCCCGTTCCGGAAGCACAGAACAGCAACATGCGCCACAGGCC 3334762
Query 105223 AATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGA 105282
|||||| |||| ||||||||||| || |||| ||| | ||||| | || ||
Sbjct 3334761 CATTGGTGTCGGCGTTCAGGGTCTTGCAGATGCGTTCCTAGCCCTTCGCCTGCCTTTCGA 3334702
Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342
|| || || || | || || ||||||||||| || || || ||||||||
Sbjct 3334701 GTCTCCTGAGGCACGAGAGCTGAACAAGCAGATATTTGAGACAATTTACCATGCCGCTCT 3334642
Query 105343 TGAGGCGAGTTCA--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 105400
|| | || ||| | || ||| | || ||||| || | || || |||
Sbjct 3334641 CACTGC--TTCCATGGAGCTTGCCAAGGAGCAAGGCCCATACTCCACATACGAAGGCTCT 3334584
Query 105401 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTA 105459
|| | || ||||| | || || ||||| |||| |||| |||| || | || |
Sbjct 3334583 CCTGTATCTCAAGGCATTCTGCAGTTTGACATGT-GGAATGTGAAGCCTTCCGATCTTTG 3334525
Query 105460 CGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCAT 105519
||||||| | | || ||||| | ||||||| | | || |||| |||||||| || |
Sbjct 3334524 GGACTGGGCATCGCTGAAGGAGCAAATCAAGGCGCATGGCATTCGCAACAGTCTGCTAGT 3334465
Query 105520 GGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 105579
|| |||||||| || ||| || | || ||||||||||| || || |||||||| ||
Sbjct 3334464 AGCACCAATGCCTACCGCCAGTACTTCCCAGATCTTGGGTAACAACGAGTGCTTTGAGCC 3334405
Query 105580 CTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 105637
||||| | || ||||| | | ||| ||| || || ||||| | | ||||||
Sbjct 3334404 GTACACATCCAATATCTACCAACGCAGAGTCCTTGCTGGCGAGTTCCAGGTCGTCAAC 3334347
>seq3
Length=2371949
Score = 96.9 bits (106), Expect = 4e-15
Identities = 155/216 (72%), Gaps = 10/216 (5%)
Strand=Plus/Minus
Query 94733 CAGTTCCGTGTATTCA-AAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAG 94788
||||||| || ||| |||||| || || ||||| || ||| || || | |||
Sbjct 2245555 CAGTTCC-TGCCATCAGAAAGAAGGCTGACTGGGCCATTCGATGGATTACCGACAAGAAG 2245497
Query 94789 TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCT 94848
|| | |||| ||| | || || | || || || || || ||||||||||||
Sbjct 2245496 TC---TACCTTCGCTCAACGTCTTGTTGCCTTCGCTGCCGTCGAAGGTATCTTCTTCAGC 2245440
Query 94849 GGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 94907
||| |||| ||| | || | ||| | |||||||| || ||||||||||||||| ||
Sbjct 2245439 GGTGCCTT-TGCTTCCATCTTCTGGTTGAAGAAGCGTGGCCTCATGCCAGGTCTCACATT 2245381
Query 94908 CTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCA 94943
|||||||||||| ||||| || |||||||| |||||
Sbjct 2245380 CTCCAACGAGCTCATCTCGCGAGACGAGGGTCTCCA 2245345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260537532640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |