Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq12 212 2e-49
seq33 129 2e-24
seq2 87.8 5e-12
>seq12
Length=4789767
Score = 212 bits (234), Expect = 2e-49
Identities = 929/1462 (64%), Gaps = 10/1462 (1%)
Strand=Plus/Minus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
|| || || |||||| | || || || || || ||||||| | | | | | ||| |
Sbjct 2514243 GCCATCGGTATCGATCTTGGAACCACATACTCGTGTGTTGGTATCTATCGCGAGGATAGA 2514184
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
| || || || || || || || || || |||| || || || | ||| ||||| ||
Sbjct 2514183 ATCGAGATCATCGCGAACGACCAGGGAAATCGAACCACCCCGTCGTTCGTGGCATTCACG 2514124
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| || |||||| |||| || ||| | || || || |||| || || || | ||
Sbjct 2514123 GACACCGAGCGTCTGATCGGAGATGCCGCCAAGAACCAAGTCGCGATGAACCCCCACAAC 2514064
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438
|| || || ||||| ||||| || ||||| | | || || ||| || |
Sbjct 2514063 ACAGTCTTCGATGCGAAGCGCCTCATTGGCCGCAAGTTCTCCGACTCGGAGGTGCAGGCC 2514004
Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498
||| | || || || || || | | | || | ||| || | | || | | |||
Sbjct 2514003 GATATGAAGCACTTCCCATTCAA-GATCATCGACAAGGCGAGCA--AGCCTGTGGTCGAG 2513947
Query 349499 GTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTT 349557
| || | || || || || || || || ||| || || || || ||| | ||
Sbjct 2513946 ATCGAGTTCAAGGGCGAGACCAAGACC-TTCACACCTGAGGAGATCAGCTCCATGATCTT 2513888
Query 349558 AGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTAT 349617
|| || ||| || | |||||| | || | |||| | || | | || |||||
Sbjct 2513887 GGTAAAGATGCGAGAGACTGCTGAGTCTTACCTTGGTGTCCCGGTCAACAACGCCGTTAT 2513828
Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677
||||| || ||||| || || ||| | ||||| || || || || ||||| |||
Sbjct 2513827 CACTGTCCCCGCCTACTTCAACGATTCTCAGCGACAAGCCACCAAGGACGCTGGTCTCAT 2513768
Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737
|| || | || ||||| |||| || ||||| || |||||||| || ||||| || ||
Sbjct 2513767 CGCAGGCCTCAACGTTCTCCGAATCATCAATGAGCCTACTGCTGCCGCCATTGCTTACGG 2513708
Query 349738 GCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797
||||| || | || ||| || |||| |||| || |||||| | |||||||| ||
Sbjct 2513707 TCTTGACAAGAAGATTGAGGGCGAGCGAAATGTTCTCATCTTTGATCTCGGTGGTGGCAC 2513648
Query 349798 TTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGG 349857
||| ||||| || || || || | || || || || || || || || | || |||||
Sbjct 2513647 TTTCGATGTTTCTCTCCTGACTATCGAGGAAGGTATCTTCGAGGTCAAGTCGACCGCTGG 2513588
Query 349858 TGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGA 349917
|||||| || | ||||| || || || || || ||||| || || || || || ||
Sbjct 2513587 TGATACCCACTTGGGTGGTGAGGACTTCGACAACCGTCTGGTCAACCACTTCGTCAACGA 2513528
Query 349918 ATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAA 349976
|| ||||| ||||| || | || | || | | || |||| || ||
Sbjct 2513527 GTTCAAGCG-CAAGCACAAGAAGGACCTGTCCTCCAACGCCCGTGCGCTGCGACGACTCC 2513469
Query 349977 GAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAA 350036
||||||| || || ||||| ||||| || | || || | |||| ||||| || || |
Sbjct 2513468 GAACTGCCTGCGAGCGTGCCAAGCGCACCCTGTCCTCGTCGGCCCAGACCTCCATCGAGA 2513409
Query 350037 TTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAG 350096
| || ||||| ||| || | ||||||| | || || || || || || || ||||
Sbjct 2513408 TCGACTCTCTCTTTGAGGGTATTGATTTCTACACCTCCATCACCCGAGCCCGATTCGAAG 2513349
Query 350097 AATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATG 350156
| || || |||||| || || | || | | ||||| || || | ||||
Sbjct 2513348 AGTTGTGCCAGGATCTCTTCCGATCCACCCTCCAGCCTGTCGACCGTGTCCTCTCGGATG 2513289
Query 350157 CAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTC 350216
| || || ||| ||| | | || | || | || || ||||| || ||||| |
Sbjct 2513288 CCAAGATCGACAAGTCCCAGGTCCACGAGATCGTCCTTGTCGGCGGTTCCACCCGTATCC 2513229
Query 350217 CAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTA 350276
| | | || || | | | || | || || || || || || | || || |
Sbjct 2513228 CCCGAATCCAGAAGCTCATCACCGACTACTTCAACGGAAAGGAGCCCAACAAGTCCATCA 2513169
Query 350277 ATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATA 350336
| || ||||| |||||||| || || || ||||| ||||| | || || ||||| | |
Sbjct 2513168 ACCCCGATGAGGCTGTTGCCTACGGCGCCGCTGTCCAGGCCGCCATCTTGTCTGGTGACA 2513109
Query 350337 AGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGAT 350393
|| || || || | || || || ||||| | || || || || ||
Sbjct 2513108 CCTCCTCCAAGGGAACCAGCGAGATCTTGCTTCTCGATGTTGCCCCGCTCTCTCTCGGTA 2513049
Query 350394 TAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAA 350453
| || ||| |||||| | ||||| || || || |||| | ||| | ||||| |
Sbjct 2513048 TCGAGACTGCTGGTGGCATGATGACCAAGCTCATCCCGCGAAACACCACTATCCCTACCA 2512989
Query 350454 AAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTAT 350513
| |||||| | || ||||| || |||| || ||||| | || || || || |
Sbjct 2512988 AGAAGTCCGAGGTCTTCTCTACCTTCTCAGACAACCAGCCTGGTGTGCTCATCCAGGTCT 2512929
Query 350514 TTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTG 350573
|| ||||| ||| ||||| || || || || || || | || || | |
Sbjct 2512928 ACGAGGGTGAGCGTCAGCGCACCAAGGACAACAACCTTCTCGGCAAGTTCGAGCTTACCG 2512869
Query 350574 AAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAA 350633
|| ||||| || |||| ||||||||||| || ||| | |||||| ||||| | |
Sbjct 2512868 GCATCCCACCTGCACCCCGAGGTGTTCCTCAGATCGAGGTCACCTTCGATCTTGATGCCA 2512809
Query 350634 ATGGTATTTTAAATGTTACCGC 350655
||||||| | || ||| ||||
Sbjct 2512808 ATGGTATCATGAACGTTTCCGC 2512787
>seq33
Length=3634720
Score = 129 bits (142), Expect = 2e-24
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | || ||||| | ||||||||||| || || || || || || ||
Sbjct 1474472 CATACCACCACGGAGTCGGAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTC 1474531
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | ||||| ||||| || || || || || || ||||| | || ||||| || ||
Sbjct 1474532 GGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCTGG 1474591
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| ||||| || || ||||| || || | || || || || || | ||| || | ||
Sbjct 1474592 GGGGATTCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCCGAAGACTC 1474651
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||| || | ||||| ||||| || || ||||| || ||||||||
Sbjct 1474652 GACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTTACGAAGATCTGCAT 1474702
Score = 118 bits (130), Expect = 3e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 140535 TGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGT 140594
|| || |||||||| || || || || || || | || || || ||||| || ||
Sbjct 1474044 TGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCTTCCAGCTGC 1474103
Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654
|| ||||| ||||| ||||||||||| || || || || || || ||||||||||| ||
Sbjct 1474104 TTACCAGCGAAGATAAGACGTTGCTGGTCTGGTGGGATACCCTCCTTATCCTGAATCTTG 1474163
Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714
| ||||| || || || | ||||| | || ||||| | |||| |||||||||||
Sbjct 1474164 GACTTTACGTTGTCGATTGTGTCAGACGACTCTACTTCCAACGTAATGGTCTTTCCGGTG 1474223
Query 140715 AGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || ||||||||
Sbjct 1474224 AGGGTCTTGACGAAGATCTGCAT 1474246
Score = 118 bits (130), Expect = 3e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||| ||||| | | || || |||||||| || ||||| || || || || || ||
Sbjct 1474700 CATACCGCCACGAAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTC 1474759
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | ||||| ||||| || || || || ||||||||||| || || ||||| || ||
Sbjct 1474760 GGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGG 1474819
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|||||||| || || ||||| || || | || || || || || | ||| || | ||
Sbjct 1474820 GGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATAGTATCCGAAGACTC 1474879
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719
|| ||||| || | |||||||| || | |||
Sbjct 1474880 CACCTCAAGGGTGATGGTCTTTCCAGTGACTGT 1474912
>seq2
Length=5100555
Score = 87.8 bits (96), Expect = 5e-12
Identities = 131/183 (72%), Gaps = 5/183 (3%)
Strand=Plus/Plus
Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAA--CAGTAACTGATGCTGTTATTA 349619
||||||||||| | |||||| || ||||| || || |||| | |||| || | |
Sbjct 1143673 AAAATGAAGGAGACTGCTGAGGCCTATTT--GTCCAAGCCAGTCAAGAATGCCGTCGTCA 1143730
Query 349620 CTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTG 349679
| || ||||||||||| |||||| |||| ||| || || || || |||||| |||
Sbjct 1143731 CAGTGCCAGCCTATTTCAATGATTCCCAACGTCAAGCTACCAAGGACGCTGGCCAAATTT 1143790
Query 349680 CGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGC 349739
| || || || ||||| || | | || || ||||||||||| || |||| || |||
Sbjct 1143791 CCGGATTGAACGTTCTCCGAGTCGTCAACGAGCCCACTGCTGCCGCCCTTGCCTA-CGGC 1143849
Query 349740 TTG 349742
|||
Sbjct 1143850 TTG 1143852
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515253701088908
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