Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq12 253 2e-62
seq33 167 3e-36
seq35 136 5e-27
seq2 98.7 1e-15
seq3 89.7 6e-13
>seq12
Length=4789767
Score = 253 bits (280), Expect = 2e-62
Identities = 894/1382 (65%), Gaps = 42/1382 (3%)
Strand=Plus/Plus
Query 80395 GTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATC 80454
||||| |||||||| ||||||||| || | |||||| | || || || || |||||
Sbjct 3334399 GTGTACGGCTCAAAGCACTCGTTGTTACCCAAGATCTGGGAAGTACTGGCGGTAGGCATT 3334458
Query 80455 GGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATCTGAC 80514
|| | || | ||| || || | ||| ||| |||||| | ||| || || |
Sbjct 3334459 GGTGCTACTAGCAGACTGTTGCGAATGCCATGCGCCTTGATTTGCTCCTTCAGCGATGCC 3334518
Query 80515 CAA----AAATCAACCCCAACGCTGTGACC--CCACATGTCGTGCTGCAAGATGCCCTCC 80568
|| ||| | | || ||| | || ||||||||| ||||| ||||| |
Sbjct 3334519 CAGTCCCAAAG--ATCGGAAGGCT-TCACATTCCACATGTCAAACTGCAGAATGCCTTGA 3334575
Query 80569 GACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGAC 80628
|| | ||||| || || | || ||| ||||| | | |||||| ||||| ||
Sbjct 3334576 GATACAGGAGAGCCTTCGTATGTGGAGTATGGGCCTTGCTCCTTGGCAAGCTCCATGGAA 3334635
Query 80629 TCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGT 80688
| | || || || || ||||| |||||| | |||||||| | || ||||
Sbjct 3334636 GCAGTGAGAGCGGCATGGTAAATTGTCTCAAATATCTGCTTGTTCAGCTCTCGTGCCTCA 3334695
Query 80689 GGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATG 80748
|| ||||| | || || | | |||| | || || || |||||||||||||
Sbjct 3334696 GGAGACTCGAAAGGCAGGCGAAGGGCTAGGAACGCATCTGCAAGACCCTGAACGCCGACA 3334755
Query 80749 GCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTA 80808
| || || | ||||||| |||| || || ||||||| ||||| ||||
Sbjct 3334756 CCAATGGGCCTGTGGCGCATGTTGCTGTTCTGTGCTTCCGGAACGGGGTAGTAGTTGACG 3334815
Query 80809 TCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAG 80868
||||||| |||| ||| || |||||| |||||||| || || || || |||
Sbjct 3334816 TCGATGATCTTATTCAAGTTTCGAACAACAACTTCGGTAACATCGTGCAGCTTTTGGAAG 3334875
Query 80869 TCGAA------TTGGTTCCCCTTCACAAATGCCGG-AAGGCTCAGGGACGCCAGATTGCA 80921
|| | || || | |||||| | ||| ||||| ||| || |||| |||||
Sbjct 3334876 TCATAGCAGCCTTCATTGTAGTCCACAAAGGACGGCAAGGC-CAGCGAAGCCAAGTTGCA 3334934
Query 80922 CACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTT 80981
||||| ||||| || | | |||||| ||| |||||||| | ||| ||
Sbjct 3334935 GACGGCGACCTCATCGGGGGCGCAGTACTCGATGATCTCCGTGCAGAGATTGGAGCTGCG 3334994
Query 80982 AATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTA 81041
|| || || || || |||||||| |||| |||||||| || |||||| |||| |
Sbjct 3334995 GATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGATTGCAAGCATCTTTGTAGAGCATGAA 3335054
Query 81042 CGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGAC 81101
||| | ||||| || ||| | || |||||||| | ||||| || | |||||||
Sbjct 3335055 AGGGTTTCCGGTTTCAGTCTGGGCCTCTAGGATGGCATACCAAAGCTTCTGTGCCTTGAT 3335114
Query 81102 CACCTTGCGGAATTTGCCTTCGGC--CACATACTTGGCGTAAGCTTCGTCGAACTTGGCA 81159
|||||| ||| || || | ||||||| |||| | ||||||| | ||
Sbjct 3335115 GGTCTTGCGACCCTTG--TTGAGCTTCTCATACTTTTCGTAGAGAGCCTCGAACTCGTCA 3335172
Query 81160 CCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTC 81218
|||| | ||| ||| ||| | || || ||||| || |||||||| ||| ||| ||
Sbjct 3335173 CCGTAGCAGT-CAGCCAGGCCGGGACATTCGTTGGGACACATCAGAGTCCAATCGCCGTT 3335231
Query 81219 GTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCA 81278
|| || ||| ||||||||| ||||| ||||| |||||| ||| || || ||
Sbjct 3335232 CTTTTCAACACGCTTCATGAAGAGATCAGGAATCCACAGGGCGAGGAAGAGATCACGTGC 3335291
Query 81279 GCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATG 81338
||| | || || | || ||||| || | || | || || | | |||||||||
Sbjct 3335292 GCGAACTTCTTCCTTGCCATGGTTCTTTCGGAGGTCCATGAACTCGAACACGTCCGCATG 3335351
Query 81339 CCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTA 81395
||| ||||| || || | |||| | || ||| |||||| || | || ||
Sbjct 3335352 CCAAGGCTCAAGGTAGATTGCGAAAGCGCCTGGGCGCTTGTTGCCACCTTGATCCACATA 3335411
Query 81396 ACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGT 81455
||| ||||| || || || |||| ||| || |||| ||| | || || || ||
Sbjct 3335412 ACGAGCAGTGTTATTGAAGACTCGCAGCATGGGAATGACACCGTTGGAAGTGCCATTGGT 3335471
Query 81456 ACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGA 81515
||| |||| || || |||| || | | ||| || || || ||||| |
Sbjct 3335472 GCCCGCGATGTATGAACCGGTGGCACGGATACGGTGGATGTTGAGGCCAATACCACCAGC 3335531
Query 81516 CCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTT 81575
| ||| || ||| ||||| || | ||| || ||||| ||||| ||||| || |
Sbjct 3335532 CATCTTGGAGATCATTGCACAGGTCTTGAGGGTGTCGTAAATGCCCTCAATGCTGTCATC 3335591
Query 81576 TTTCATGTC-------AAGCAAGAA-ACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCA 81627
|||||||| ||||| ||| |||| |||| ||||||| | ||| |||
Sbjct 3335592 CTTCATGTCGACTAGGAAGCATGAAGACAG-TTGA-GCCTGAGGG------GTGCCCGCA 3335643
Query 81628 TTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCC 81687
||||| || ||||| | || || ||||| | | | ||||||| || ||||||||
Sbjct 3335644 TTGAAGAGGGTTGGCGAGGCATGTGTGAAAAACTTGCTGGACATCAAGTTGTAGGTTTCA 3335703
Query 81688 TTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTACTGG 81747
|||| || || || ||| || ||||||| ||| |||||||| | ||||| ||||
Sbjct 3335704 ATGACTCGCTCAACATTGTCTCCCCAGATACCGACAGCAACACGCATGATCATGTGCTGG 3335763
Query 81748 GG 81749
||
Sbjct 3335764 GG 3335765
>seq33
Length=3634720
Score = 167 bits (184), Expect = 3e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||||||||| || ||||| ||||||||||||
Sbjct 1474474 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACTCTCGAGGTTGAGTCATCC 1474415
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || | ||| | || ||||| ||||||||||| || || |||||||||
Sbjct 1474414 GATACCATCGATAACGTAAAGTCCAAGATTCAAGACAAGGAGGGCATCCCACCAGACCAG 1474355
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || || ||||| | ||||| | ||| || || | ||||| ||
Sbjct 1474354 CAGCGACTCATCTTCGCGGGCAAGCAGTTGGAGGACGGTCGAACGCTCTCGGACTACAAC 1474295
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| || || || ||||| ||| | || ||||| |||||
Sbjct 1474294 ATTCAGAAGGAGTCTACCCTCCATCTCGTCCTCCGCCTTCGTGGTGG 1474248
Score = 167 bits (184), Expect = 3e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || ||||||||||| || || |||||||| |||||
Sbjct 1474702 ATGCAGATCTTCGTAAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCTTCG 1474643
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || | ||| | || || ||||||||||||||||| || |||||||||
Sbjct 1474642 GATACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAG 1474583
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | || || || || ||||| |||||||||| || ||||| | ||||| ||
Sbjct 1474582 CAGCGATTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGAACCCTCTCCGACTACAAC 1474523
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| |||||||| |||||||| | || | || || || |||||
Sbjct 1474522 ATCCAGAAGGAATCTACTCTTCACTTGGTTCTCCGACTCCGTGGTGG 1474476
Score = 163 bits (180), Expect = 3e-35
Identities = 158/203 (78%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|| || ||||| || || |||||||| ||||| |||| || | || | ||| |
Sbjct 1474906 ACTGGAAAGACCATCACCCTTGAGGTGGAGTCTTCGGATACTATCGACAACGTCAAGTCG 1474847
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || |||||||||||||||||||| |||||||||||||| || || |||||||| |||
Sbjct 1474846 AAGATCCAGGACAAGGAGGGAATTCCCCCAGACCAGCAGCGCCTGATCTTTGCTGGCAAG 1474787
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| |||||||||| || ||||| | ||||| || |||| ||||| ||||| ||||||
Sbjct 1474786 CAGCTCGAGGATGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTTCAT 1474727
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | |||||||| || ||
Sbjct 1474726 CTCGTCCTCCGTCTTCGTGGCGG 1474704
Score = 152 bits (168), Expect = 6e-32
Identities = 174/231 (75%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||| ||||| ||||| | || || ||||| |
Sbjct 1474246 ATGCAGATCTTCGTCAAGACCCTCACCGGAAAGACCATTACGTTGGAAGTAGAGTCGTCT 1474187
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | || |||||||| |||||||| || || |||||||||
Sbjct 1474186 GACACAATCGACAACGTAAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCAGACCAG 1474127
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
|| ||||| || || ||||||||||| || || || | ||| ||||| ||| ||||| ||
Sbjct 1474126 CAACGTCTTATCTTCGCTGGTAAGCAGCTGGAAGACGGTCGCACCCTGAGC-GACTACAA 1474068
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| ||||| || || || || ||||| | ||||| ||||| || ||
Sbjct 1474067 CATCCAGAAGGAGTCTACGCTCCACTTAGTCCTCCGTCTGCGCGGCGGCCA 1474017
Score = 100 bits (110), Expect = 3e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 27408 GCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGA 27467
|||||| ||||| ||||| ||||||||||| || ||||||||| | | || ||
Sbjct 2337812 GCAAATATTTGTGAAGACTAAGACCGGCAAGACAATAACTCTTGAGTGTCACCCATCAGA 2337753
Query 27468 TAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCA 27527
| || | ||| | ||| ||||||||| |||||||| || ||||| |||||||||||
Sbjct 2337752 CACGATCGACAATGTCAAGAGTAAAATTCAAGACAAGGAAGGTATTCCACCAGACCAGCA 2337693
Query 27528 GCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562
|| || || ||||| || ||||| | || ||||
Sbjct 2337692 ACGACTGATCTTTGCAGGAAAGCAGTTGGAAGATG 2337658
>seq35
Length=2560152
Score = 136 bits (150), Expect = 5e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
|| ||||| ||||| ||||| || ||||| || |||||||| || || ||||| |||||
Sbjct 153336 ATCATGCAGATCTTCGTCAAAACCCTTACGGGGAAGACTATCACCCTCGAGGTGGAGTCT 153277
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
|| | ||| | ||| | ||| | || || || ||||||||||| || || ||||||
Sbjct 153276 TCCGACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGCATCCCGCCAGAC 153217
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|| ||||| | || || || || ||||| |||||||| | || |||||| | || ||
Sbjct 153216 CAACAGCGATTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACCCTATCTGATTAC 153157
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| | || ||||| || ||| | || || || ||||||| || || ||
Sbjct 153156 AACATTCAGAAGGAGTCGACTTTGCACCTGGTGCTGCGTCTACGAGGAGG 153107
>seq2
Length=5100555
Score = 98.7 bits (108), Expect = 1e-15
Identities = 199/293 (68%), Gaps = 2/293 (1%)
Strand=Plus/Minus
Query 31953 AGATATCAAGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGT 32012
||| | || ||||||||| || ||| ||||| | |||||| || || || ||
Sbjct 1460593 AGACAACATGCGGTCCATCCCCTCCGTTATTGACGGATTGAAGCCTGGTCAACGAAAAGT 1460534
Query 32013 GATATACGCCTGCCTCAAGAAGAACCTG-TCGAGTGACATGAAGGTGGCGCAGCTGTCGG 32071
|| ||||| || ||||||||||| | || || ||| |||||| | || | |
Sbjct 1460533 CATTTACGCATGTTTCAAGAAGAACATTCTCAAG-GACCAGAAGGTCATTGAATTGGCTG 1460475
Query 32072 GCTACGTGGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTG 32131
| ||| | | |||||||| | |||||||| || || | ||||| ||| || ||
Sbjct 1460474 GTTACATCTCCGAGCAAACTTCGTATCACCATGGTGAAGTTTCGCTGCAGCAAACAATCA 1460415
Query 32132 TCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGAC 32191
|| ||| || || | ||| |||||| | || ||| | |||| ||||| || ||||
Sbjct 1460414 TCGGCCTCGCACAAACCTTCGTCGGTTCCAACAACGTCAACTGCCTCGAACCCAGTGGAA 1460355
Query 32192 AGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATC 32244
| ||||| | || |||||||||||| || ||||| || | ||||| |||
Sbjct 1460354 ATTTTGGATCACGTCTCGCCGGTGGCTCAGACGCTGCTAGTCCTCGTTATATC 1460302
>seq3
Length=2371949
Score = 89.7 bits (98), Expect = 6e-13
Identities = 257/388 (66%), Gaps = 13/388 (3%)
Strand=Plus/Minus
Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGATGAAT--CGTGG-GTCGTCGTTTGGTCAGCGT 64719
|| |||||||| |||||||| || ||||| | | | ||| | || | ||| |||
Sbjct 2245538 AAGAAGGCTGACTGGGCCATTCGATGGATTACCGACAAGAAGTCTACCTTCGCTCAACGT 2245479
Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779
|| | || || || || ||||| || ||||| || | || ||| || |||
Sbjct 2245478 CTTGTTGCCTTCGCTGCCGTCGAAGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTC 2245419
Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839
||| | || ||||| ||||| ||||||||||| | || || |||||||| ||||| ||
Sbjct 2245418 TGGTTGAAGAAGCGTGGCCTCATGCCAGGTCTCACATTCTCCAACGAGCTCATCTCGCGA 2245359
Query 64840 GACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAAG----GACAA 64895
|||||||| ||||| || || || | ||| ||| ||| | | | ||| |
Sbjct 2245358 GACGAGGGTCTCCATACTGATTTCGCCTGTCTCCTATTCTCTCACTTGAGGAATCGACCA 2245299
Query 64896 ACCATCACATG-GGACTATAATTGATATAGTAAAATCGGCTGTAGAAATTGAAAAGGAAT 64954
| || ||| | || | | | || ||| || | ||||| ||||||| | || |
Sbjct 2245298 AGCA-AACAAGTGGTCCAGGA-TGTTATCGTTGA---CGCTGTCAAAATTGAGCAAGAGT 2245244
Query 64955 TCATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAACAGT 65014
|| | || | || || || ||| |||| | |||||| | || |||||| ||||
Sbjct 2245243 TCCTGACCGAGGCTCTGCCATGTGGTCTTCTTGGCATGAACGCGACCCTGATGAAGCAGT 2245184
Query 65015 ATATCGAATTTGTAGCAGATCGCCTGCT 65042
||||||| || || || ||||| || ||
Sbjct 2245183 ATATCGAGTTCGTTGCCGATCGACTCCT 2245156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310143360320
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