Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq35 138 1e-27
seq33 125 6e-24
>seq35
Length=2560152
Score = 138 bits (152), Expect = 1e-27
Identities = 168/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || ||||| || || || ||| |||| || || || ||||| | ||
Sbjct 153334 CATGCAGATCTTCGTCAAAACCCTTACGGGGAAGACTATCACCCTCGAGGTGGAGTCTTC 153275
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | || || | ||||| || || |||||||| || ||||| || || || ||
Sbjct 153274 CGACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGCATCCCGCCAGACCA 153215
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| || || | ||||||||| || | || ||| | ||| | || ||||||||
Sbjct 153214 ACAGCGATTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACCCTATCTGATTACAA 153155
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|||||| ||||||||||| || || |||| ||||| | || || |||
Sbjct 153154 CATTCAGAAGGAGTCGACTTTGCACCTGGTGCTGCGTCTACGAGGAGGC 153106
>seq33
Length=3634720
Score = 125 bits (138), Expect = 6e-24
Identities = 168/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || ||||||||| | || ||||| || || || | |||
Sbjct 1474474 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACTCTCGAGGTTGAGTCATCC 1474415
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || || || ||||||||||| || ||||| ||||| || ||
Sbjct 1474414 GATACCATCGATAACGTAAAGTCCAAGATTCAAGACAAGGAGGGCATCCCACCAGACCAG 1474355
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166
||||| | || | ||| ||||| || ||||| ||| || ||| || | || || |||||
Sbjct 1474354 CAGCGACTCATCTTCGCGGGCAAGCAGTTGGAGGACGGT-CGAACGCTCTCGGACTACAA 1474296
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||| |||||||| ||| | ||| | || | || | || ||||||||
Sbjct 1474295 CATTCAGAAGGAGTCTACCCTCCATCTCGTCCTCCGCCTTCGTGGTGGCAT 1474245
Score = 91.5 bits (100), Expect = 1e-13
Identities = 114/154 (74%), Gaps = 2/154 (1%)
Strand=Plus/Minus
Query 26990 GCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCG-TCCG 27048
||| |||||||| || ||| |||||||||| | || |||||||| ||| ||| || |
Sbjct 2337812 GCAAATATTTGTGAAGACTAAGACCGGCAAGACAATAACTCTTGA-GTGTCACCCATCAG 2337754
Query 27049 ACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAAC 27108
|| |||| || | ||||| |||||||||||||| ||||| || ||||| || || |
Sbjct 2337753 ACACGATCGACAATGTCAAGAGTAAAATTCAAGACAAGGAAGGTATTCCACCAGACCAGC 2337694
Query 27109 AGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142
| || | || | || || || || ||||||||
Sbjct 2337693 AACGACTGATCTTTGCAGGAAAGCAGTTGGAAGA 2337660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918204286720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |