Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq12 262 6e-65
>seq12
Length=4789767
Score = 262 bits (290), Expect = 6e-65
Identities = 1194/1874 (64%), Gaps = 42/1874 (2%)
Strand=Plus/Plus
Query 75373 CAACG-TGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431
||||| ||||||| ||||| | | |||| || ||||| || |||||||| || || |
Sbjct 3334004 CAACGGTGAACTGGATGGGCGCAGCCGCTGCTTGAGTACGGAGGTAGTACATTCCGGTCT 3334063
Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491
| ||||| || |||| ||| |||||||||||| || | ||| | |||| ||
Sbjct 3334064 TAAGACCGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTGCCCATAGTCGGGTCTT 3334123
Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551
||||| || |||| |||||| ||||| ||||| || || | || || ||||| |
Sbjct 3334124 TCATATGGATGTTCAAGGACTGAGACTGATCAATGAAGGCACCGCGGTCGGCAGCCATCT 3334183
Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611
| || || || | |||||||| | ||| ||| | | ||||||||| | |
Sbjct 3334184 GGACAACAGTACGCTGTGAGATTTCCCAGACAGTCTTGTAGAGGGCTTTGATATCTGCGG 3334243
Query 75612 GAAGATTTGTA---TTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668
| | |||| | || || | ||| ||| |||| || || ||||| || | |
Sbjct 3334244 GGATGTTTGGAATGTTCTGGACGGAGCCGTTTTCAGCAATGATACGGTTCTTCATGGCGT 3334303
Query 75669 CATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATT 75728
|| |||||| | || | | | | ||||| ||| || || | || || |
Sbjct 3334304 CAGACCACAAGCCCATGTCAACCAGATCCTTTAGGAGCCAAGGGTTGACGACCTGGAACT 3334363
Query 75729 CTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 75788
| |||| | ||||| || ||| ||||| || || || || | | || ||||
Sbjct 3334364 CGCCAGCAAGGACTCTGCGTTGGTAGATATTGGATGTGTACGGCTCAAAGCACTCGTTGT 3334423
Query 75789 TTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGA 75848
| ||||| || || | ||| || || ||||| ||||| || | | ||| || | |
Sbjct 3334424 TACCCAAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACTAGCAGACTGTTGCGAA 3334483
Query 75849 GACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAA 75908
||||| | |||||| || || || || ||| ||||||||||| || || |
Sbjct 3334484 TGCCATGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCCAAAGATCGGAAGGCTTCA 3334543
Query 75909 CATCCCAGAGATCGTATTGTAGAATTCCGTT-GCTAGCATATGATCCATTATATGTTTCG 75967
||| ||| | || | || ||||| || | | || || || || | ||||| |
Sbjct 3334544 CATTCCACATGTCAAACTGCAGAATGCCTTGAGATA-CAGGAGAGCCTTCGTATGTGGAG 3334602
Query 75968 TAAGTCCCGTCCTTTTCAGCTAGTTC---GCAACTCGCCTCTAACGCACCGTAATAAATT 76024
|| | || | || | || || || | || || | || | | ||||||
Sbjct 3334603 TATGGGCCTTGCTCCTTGGCAAGCTCCATGGAA---GCAGTGAGAGCGGCATGGTAAATT 3334659
Query 76025 GTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAA 76084
|| || || |||| ||| || || ||| | || ||| || || ||||| | | ||
Sbjct 3334660 GTCTCAAATATCTGCTTGTTCAGCTCTCGTGCCTCAGGAGACTCGAAAGGC--AGGCGAA 3334717
Query 76085 AGAATA--AATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTAT 76142
| || || |||||||| || |||||||| || | |||||| || || || | | | |
Sbjct 3334718 GGGCTAGGAACGCATCTGCAAGACCCTGAACGCCGACACCAATGGGCCTGTGGCGCATGT 3334777
Query 76143 TGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTC 76202
|| | | ||||| |||| ||||| || || | || || || ||||| | ||||
Sbjct 3334778 TGCTGTTCTGTGCTTCCGGAACGGGGTAGTAGTTGACGTCGATGATCTTATTCAAGTTTC 3334837
Query 76203 TGACAACTACTT---TAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCTAT-- 76257
||||| |||| |||| ||| | || || | || ||| | || || |
Sbjct 3334838 GAACAACAACTTCGGTAACATCGTGC---AGCTTTTGGAAGTCATAGCAGCCTTCATTGT 3334894
Query 76258 ----CACAAAC-ATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCA 76312
|||||| | ||| || | || || | || || ||||| ||||||| |
Sbjct 3334895 AGTCCACAAAGGACGGCAAG-GCCAGCGAAGCCAAGTTGCAGACGGCGACCTCATCGGGG 3334953
Query 76313 TTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGT 76372
| || | || ||||||||||| ||||| | ||| || |||||||| |
Sbjct 3334954 GCGCAGTACTCGATGATCTCCGTGCAGAGATTGGAGCTGCGGATGGTGCCAAGATTCTTC 3335013
Query 76373 TGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATC 76432
||||||||||| || || | || || || || | || || |||| |||||| ||
Sbjct 3335014 TGGTTGCTCTTGCGATTGCAAGCATCTTTGTAGAGCATGAAAGGGTTTCCGGTTTCAGTC 3335073
Query 76433 TGTGATTCGATAATAGATTTCCAGACGACTCTA-GCTTTTATTATAGATTTGTATCGCTT 76491
|| | || | || | | ||| | | ||| || || || | ||| | |||
Sbjct 3335074 TGGGCCTCTAGGATGGCATACCAAA-GCTTCTGTGCCTTGATGGTC---TTGCGACCCTT 3335129
Query 76492 CTCT--CTT-TCATATTGT--GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCC 76546
| ||| ||||| | | ||| | | || || || || || || | ||| ||
Sbjct 3335130 GTTGAGCTTCTCATACTTTTCGTAGAGAGCC--TCGAACTCGTCACCGTAGCAGTCAGCC 3335187
Query 76547 AAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTC 76606
| || |||||||| || |||||||||| | ||| || || | | | ||| || |||
Sbjct 3335188 AGGCCGGGACATTCGTTGGGACACATCAGAGTCCAATCGCCGTTCTTTTCAACACGCTTC 3335247
Query 76607 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTT 76666
|| ||||||||||| ||||| || || | || ||||| || | | | |||||| ||
Sbjct 3335248 ATGAAGAGATCAGGAATCCACAGGGCGAGGAAGAGATCACGTGCGCGAACTTCTTCCTTG 3335307
Query 76667 CCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 76726
|| |||||| || || | |||||| | | || | |||||| || || || ||
Sbjct 3335308 CCATGGTTCTTTCGGAGGTCCATGAACTCGAACACGTCCGCATGCCAAGGCTCAAGGTAG 3335367
Query 76727 ATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTA 76786
|| || | | | || || || || || || || ||||| | ||| | |||||||||||
Sbjct 3335368 ATTGCGAAAGCGCCTGGGCGCTTGTTGCCACCTTGATCCACATAACGAGCAGTGTTATTG 3335427
Query 76787 TAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTT 76846
| |||| || ||| ||||| | ||||| || || ||||| || || | || ||
Sbjct 3335428 AAGACTCGCAGCATGGGAATGACACCGTTGGAAGTGCCATTGGTGCCCGCGATGTATGAA 3335487
Query 76847 CCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGA 76906
|| ||||| ||| || ||||| || || || ||||| || ||||| |
Sbjct 3335488 CCGGTGGCACGGATACGGTGGATGTTGAGGCCAATACCACCAGCCATCTTGGAGATCATT 3335547
Query 76907 GCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGA 76966
|||||| || | ||||| || |||||||| || || |||||| |||||| | ||
Sbjct 3335548 GCACAGGTCTTGAGGGTGTCGTAAATGCCCTCAATGCTGTCATCCTTCATGTCGACTAGG 3335607
Query 76967 AAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGA 77026
|| || ||||| |||| ||| || || ||||| || | || || || |||||
Sbjct 3335608 AAGCATGAAGACAGTTGAGCCTGAGGGGTGCCCGCATTGAAGAGGGTTGGCGAGGCATGT 3335667
Query 77027 GTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGA 77086
||||| | || || | | ||||| |||||||| ||| || | || |
Sbjct 3335668 GTGAAAAACTTGCTGGACATCAAGTTGTAGGTTTCAATGACTCGCTCAACATTGTCTCCC 3335727
Query 77087 TGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTT 77146
|| || ||||| |||||||| | ||| ||||| ||||| || || |||| ||
Sbjct 3335728 CAGATACCGACAGCAACACGCATGATCATGTGCTGGGGTCGCTCAACGATCTTGCCATCA 3335787
Query 77147 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 77206
| ||| | | ||| ||| | || |||||||| ||||| ||||| | ||| ||||||
Sbjct 3335788 AGTTTAAGGAGGTAGGATCTCTCTAAAGTTTTGAAACCGAAATATTGGTAGTTGAAGTCT 3335847
Query 77207 CTTTCGTAAATAAT 77220
| || || | |||
Sbjct 3335848 CGGTCATACACAAT 3335861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712934079179520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |