Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02- 10] 36 sequences; 42,868,360 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq12 262 6e-65 >seq12 Length=4789767 Score = 262 bits (290), Expect = 6e-65 Identities = 1194/1874 (64%), Gaps = 42/1874 (2%) Strand=Plus/Plus Query 75373 CAACG-TGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431 ||||| ||||||| ||||| | | |||| || ||||| || |||||||| || || | Sbjct 3334004 CAACGGTGAACTGGATGGGCGCAGCCGCTGCTTGAGTACGGAGGTAGTACATTCCGGTCT 3334063 Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491 | ||||| || |||| ||| |||||||||||| || | ||| | |||| || Sbjct 3334064 TAAGACCGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTGCCCATAGTCGGGTCTT 3334123 Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551 ||||| || |||| |||||| ||||| ||||| || || | || || ||||| | Sbjct 3334124 TCATATGGATGTTCAAGGACTGAGACTGATCAATGAAGGCACCGCGGTCGGCAGCCATCT 3334183 Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611 | || || || | |||||||| | ||| ||| | | ||||||||| | | Sbjct 3334184 GGACAACAGTACGCTGTGAGATTTCCCAGACAGTCTTGTAGAGGGCTTTGATATCTGCGG 3334243 Query 75612 GAAGATTTGTA---TTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668 | | |||| | || || | ||| ||| |||| || || ||||| || | | Sbjct 3334244 GGATGTTTGGAATGTTCTGGACGGAGCCGTTTTCAGCAATGATACGGTTCTTCATGGCGT 3334303 Query 75669 CATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATT 75728 || |||||| | || | | | | ||||| ||| || || | || || | Sbjct 3334304 CAGACCACAAGCCCATGTCAACCAGATCCTTTAGGAGCCAAGGGTTGACGACCTGGAACT 3334363 Query 75729 CTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 75788 | |||| | ||||| || ||| ||||| || || || || | | || |||| Sbjct 3334364 CGCCAGCAAGGACTCTGCGTTGGTAGATATTGGATGTGTACGGCTCAAAGCACTCGTTGT 3334423 Query 75789 TTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGA 75848 | ||||| || || | ||| || || ||||| ||||| || | | ||| || | | Sbjct 3334424 TACCCAAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACTAGCAGACTGTTGCGAA 3334483 Query 75849 GACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAA 75908 ||||| | |||||| || || || || ||| ||||||||||| || || | Sbjct 3334484 TGCCATGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCCAAAGATCGGAAGGCTTCA 3334543 Query 75909 CATCCCAGAGATCGTATTGTAGAATTCCGTT-GCTAGCATATGATCCATTATATGTTTCG 75967 ||| ||| | || | || ||||| || | | || || || || | ||||| | Sbjct 3334544 CATTCCACATGTCAAACTGCAGAATGCCTTGAGATA-CAGGAGAGCCTTCGTATGTGGAG 3334602 Query 75968 TAAGTCCCGTCCTTTTCAGCTAGTTC---GCAACTCGCCTCTAACGCACCGTAATAAATT 76024 || | || | || | || || || | || || | || | | |||||| Sbjct 3334603 TATGGGCCTTGCTCCTTGGCAAGCTCCATGGAA---GCAGTGAGAGCGGCATGGTAAATT 3334659 Query 76025 GTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAA 76084 || || || |||| ||| || || ||| | || ||| || || ||||| | | || Sbjct 3334660 GTCTCAAATATCTGCTTGTTCAGCTCTCGTGCCTCAGGAGACTCGAAAGGC--AGGCGAA 3334717 Query 76085 AGAATA--AATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTAT 76142 | || || |||||||| || |||||||| || | |||||| || || || | | | | Sbjct 3334718 GGGCTAGGAACGCATCTGCAAGACCCTGAACGCCGACACCAATGGGCCTGTGGCGCATGT 3334777 Query 76143 TGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTC 76202 || | | ||||| |||| ||||| || || | || || || ||||| | |||| Sbjct 3334778 TGCTGTTCTGTGCTTCCGGAACGGGGTAGTAGTTGACGTCGATGATCTTATTCAAGTTTC 3334837 Query 76203 TGACAACTACTT---TAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCTAT-- 76257 ||||| |||| |||| ||| | || || | || ||| | || || | Sbjct 3334838 GAACAACAACTTCGGTAACATCGTGC---AGCTTTTGGAAGTCATAGCAGCCTTCATTGT 3334894 Query 76258 ----CACAAAC-ATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCA 76312 |||||| | ||| || | || || | || || ||||| ||||||| | Sbjct 3334895 AGTCCACAAAGGACGGCAAG-GCCAGCGAAGCCAAGTTGCAGACGGCGACCTCATCGGGG 3334953 Query 76313 TTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGT 76372 | || | || ||||||||||| ||||| | ||| || |||||||| | Sbjct 3334954 GCGCAGTACTCGATGATCTCCGTGCAGAGATTGGAGCTGCGGATGGTGCCAAGATTCTTC 3335013 Query 76373 TGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATC 76432 ||||||||||| || || | || || || || | || || |||| |||||| || Sbjct 3335014 TGGTTGCTCTTGCGATTGCAAGCATCTTTGTAGAGCATGAAAGGGTTTCCGGTTTCAGTC 3335073 Query 76433 TGTGATTCGATAATAGATTTCCAGACGACTCTA-GCTTTTATTATAGATTTGTATCGCTT 76491 || | || | || | | ||| | | ||| || || || | ||| | ||| Sbjct 3335074 TGGGCCTCTAGGATGGCATACCAAA-GCTTCTGTGCCTTGATGGTC---TTGCGACCCTT 3335129 Query 76492 CTCT--CTT-TCATATTGT--GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCC 76546 | ||| ||||| | | ||| | | || || || || || || | ||| || Sbjct 3335130 GTTGAGCTTCTCATACTTTTCGTAGAGAGCC--TCGAACTCGTCACCGTAGCAGTCAGCC 3335187 Query 76547 AAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTC 76606 | || |||||||| || |||||||||| | ||| || || | | | ||| || ||| Sbjct 3335188 AGGCCGGGACATTCGTTGGGACACATCAGAGTCCAATCGCCGTTCTTTTCAACACGCTTC 3335247 Query 76607 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTT 76666 || ||||||||||| ||||| || || | || ||||| || | | | |||||| || Sbjct 3335248 ATGAAGAGATCAGGAATCCACAGGGCGAGGAAGAGATCACGTGCGCGAACTTCTTCCTTG 3335307 Query 76667 CCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 76726 || |||||| || || | |||||| | | || | |||||| || || || || Sbjct 3335308 CCATGGTTCTTTCGGAGGTCCATGAACTCGAACACGTCCGCATGCCAAGGCTCAAGGTAG 3335367 Query 76727 ATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTA 76786 || || | | | || || || || || || || ||||| | ||| | ||||||||||| Sbjct 3335368 ATTGCGAAAGCGCCTGGGCGCTTGTTGCCACCTTGATCCACATAACGAGCAGTGTTATTG 3335427 Query 76787 TAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTT 76846 | |||| || ||| ||||| | ||||| || || ||||| || || | || || Sbjct 3335428 AAGACTCGCAGCATGGGAATGACACCGTTGGAAGTGCCATTGGTGCCCGCGATGTATGAA 3335487 Query 76847 CCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGA 76906 || ||||| ||| || ||||| || || || ||||| || ||||| | Sbjct 3335488 CCGGTGGCACGGATACGGTGGATGTTGAGGCCAATACCACCAGCCATCTTGGAGATCATT 3335547 Query 76907 GCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGA 76966 |||||| || | ||||| || |||||||| || || |||||| |||||| | || Sbjct 3335548 GCACAGGTCTTGAGGGTGTCGTAAATGCCCTCAATGCTGTCATCCTTCATGTCGACTAGG 3335607 Query 76967 AAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGA 77026 || || ||||| |||| ||| || || ||||| || | || || || ||||| Sbjct 3335608 AAGCATGAAGACAGTTGAGCCTGAGGGGTGCCCGCATTGAAGAGGGTTGGCGAGGCATGT 3335667 Query 77027 GTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGA 77086 ||||| | || || | | ||||| |||||||| ||| || | || | Sbjct 3335668 GTGAAAAACTTGCTGGACATCAAGTTGTAGGTTTCAATGACTCGCTCAACATTGTCTCCC 3335727 Query 77087 TGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTT 77146 || || ||||| |||||||| | ||| ||||| ||||| || || |||| || Sbjct 3335728 CAGATACCGACAGCAACACGCATGATCATGTGCTGGGGTCGCTCAACGATCTTGCCATCA 3335787 Query 77147 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 77206 | ||| | | ||| ||| | || |||||||| ||||| ||||| | ||| |||||| Sbjct 3335788 AGTTTAAGGAGGTAGGATCTCTCTAAAGTTTTGAAACCGAAATATTGGTAGTTGAAGTCT 3335847 Query 77207 CTTTCGTAAATAAT 77220 | || || | ||| Sbjct 3335848 CGGTCATACACAAT 3335861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934079179520