Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq201 107 4e-18
seq5 95.1 3e-14
>seq201
Length=168916
Score = 107 bits (118), Expect = 4e-18
Identities = 177/251 (71%), Gaps = 6/251 (2%)
Strand=Plus/Minus
Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGT--GACGCTATTCCATGTC 230443
||||| || || || |||| | ||| ||||| || |||| || ||| | || ||||
Sbjct 77887 ATCATCACCGAGGCTGTTGTCATCGAGAAGGAATT--TTTGACAGATGCTTTGCC-TGTC 77831
Query 230444 GC-CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGC 230502
|| || ||||||||||||| |||| ||| ||| || || || ||||| ||||||||
Sbjct 77830 GCTCTGCTTGGCATGAACGCCAAACTGATGCAACAATATATTGAGTTCGTTGCCGACCGT 77771
Query 230503 ATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATG 230562
|| | |||| || || || |||| ||||| | |||| || || ||||||
Sbjct 77770 CTTCTCCTTGCCCTCGGAAACAAGAAGTACTACAATGCCCAGAATCCTTTCAGCTTTATG 77711
Query 230563 GAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAG 230622
|| ||| || | || ||||| ||||||||||| ||||||||| |||| || |||
Sbjct 77710 GACAACATCTCATTGGCGGGAAAGACAAACTTCTTCGAGAAGCGTGTCGGTGATTACCAG 77651
Query 230623 AGGCCTGGTGT 230633
| | | |||||
Sbjct 77650 AAGACCGGTGT 77640
>seq5
Length=88410
Score = 95.1 bits (104), Expect = 3e-14
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 318486 AATGACCACAACACCTCCGCCAAAGTTCTTAAGTGCTTCGGCCATTGCTCCGAGACTCTC 318545
||||| || ||||| || |||| | ||| || || | || || || || || ||
Sbjct 50364 AATGATGACTACACCACCCTCAAACTCCTTGAGAGCCTTGGACAGAGCGCCCAGCGAGTC 50423
Query 318546 GCGGTCAACGAAGTTGGTCGGTTCGTCCAAAACGATCACGTGGGGTTGTTGCCATAGAGC 318605
||||||| | ||||||||||||| || | |||||||| ||| || |||||||| | ||
Sbjct 50424 CCGGTCAAGGTAGTTGGTCGGTTCATCGAGAACGATCAAGTGAGGACGTTGCCAT-GTGC 50482
Query 318606 -AGCGCCAATAACCAATTTCAGCTTTTGCCCGCCAGATAGACCACGAATGCGAGAATGAG 318664
||| | | ||| | || | ||||| ||||| |||||||| |||||||| ||||
Sbjct 50483 AAGCAGCGAGAACGACCTTGACACGCTGCCCACCAGACAGACCACGCATGCGAGAGTGAG 50542
Query 318665 TTGTAAATTCAGGGTCGAGCCCAACATTTGC 318695
| | ||| | |||||| || | ||| ||
Sbjct 50543 AGATGAGTTCCGCGTCGAGACCGAAATTGGC 50573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057811896840590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |