Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq201 107 4e-18 seq5 95.1 3e-14 >seq201 Length=168916 Score = 107 bits (118), Expect = 4e-18 Identities = 177/251 (71%), Gaps = 6/251 (2%) Strand=Plus/Minus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGT--GACGCTATTCCATGTC 230443 ||||| || || || |||| | ||| ||||| || |||| || ||| | || |||| Sbjct 77887 ATCATCACCGAGGCTGTTGTCATCGAGAAGGAATT--TTTGACAGATGCTTTGCC-TGTC 77831 Query 230444 GC-CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGC 230502 || || ||||||||||||| |||| ||| ||| || || || ||||| |||||||| Sbjct 77830 GCTCTGCTTGGCATGAACGCCAAACTGATGCAACAATATATTGAGTTCGTTGCCGACCGT 77771 Query 230503 ATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATG 230562 || | |||| || || || |||| ||||| | |||| || || |||||| Sbjct 77770 CTTCTCCTTGCCCTCGGAAACAAGAAGTACTACAATGCCCAGAATCCTTTCAGCTTTATG 77711 Query 230563 GAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAG 230622 || ||| || | || ||||| ||||||||||| ||||||||| |||| || ||| Sbjct 77710 GACAACATCTCATTGGCGGGAAAGACAAACTTCTTCGAGAAGCGTGTCGGTGATTACCAG 77651 Query 230623 AGGCCTGGTGT 230633 | | | ||||| Sbjct 77650 AAGACCGGTGT 77640 >seq5 Length=88410 Score = 95.1 bits (104), Expect = 3e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 318486 AATGACCACAACACCTCCGCCAAAGTTCTTAAGTGCTTCGGCCATTGCTCCGAGACTCTC 318545 ||||| || ||||| || |||| | ||| || || | || || || || || || Sbjct 50364 AATGATGACTACACCACCCTCAAACTCCTTGAGAGCCTTGGACAGAGCGCCCAGCGAGTC 50423 Query 318546 GCGGTCAACGAAGTTGGTCGGTTCGTCCAAAACGATCACGTGGGGTTGTTGCCATAGAGC 318605 ||||||| | ||||||||||||| || | |||||||| ||| || |||||||| | || Sbjct 50424 CCGGTCAAGGTAGTTGGTCGGTTCATCGAGAACGATCAAGTGAGGACGTTGCCAT-GTGC 50482 Query 318606 -AGCGCCAATAACCAATTTCAGCTTTTGCCCGCCAGATAGACCACGAATGCGAGAATGAG 318664 ||| | | ||| | || | ||||| ||||| |||||||| |||||||| |||| Sbjct 50483 AAGCAGCGAGAACGACCTTGACACGCTGCCCACCAGACAGACCACGCATGCGAGAGTGAG 50542 Query 318665 TTGTAAATTCAGGGTCGAGCCCAACATTTGC 318695 | | ||| | |||||| || | ||| || Sbjct 50543 AGATGAGTTCCGCGTCGAGACCGAAATTGGC 50573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057811896840590