Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq292 181 1e-40
>seq292
Length=28646
Score = 181 bits (200), Expect = 1e-40
Identities = 673/1045 (64%), Gaps = 10/1045 (1%)
Strand=Plus/Plus
Query 53804 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATC 53863
|| || ||||| ||||| || |||||||| ||||| || | || || ||||| || ||
Sbjct 10936 TGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATATAAGGAGTCCCAGTCTCGGTC 10995
Query 53864 TGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTT 53923
|| | ||||| ||||| | ||| | | ||||| | | | | ||| |
Sbjct 10996 TGTGCTTCTAGGATCGCATACCACAACTTCTGGGCCTTGACCGTC--TGACGACCTCGTC 11053
Query 53924 TCTCTTTCGTATAGTGT--ATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATC 53981
||||||| ||| ||| ||| | || || || || || | |||| | | |
Sbjct 11054 CCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGCCATAGACATCAGCAAGGC 11113
Query 53982 CAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAA 54041
| || |||| ||||| | || | ||| ||| || | || || ||| |||| |
Sbjct 11114 CCGGTGCCTCATGAGGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGTCTCATGA 11173
Query 54042 AGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTG 54101
| ||||| ||| ||||||| || ||| | || | || | | || || |||||
Sbjct 11174 ATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCGT 11233
Query 54102 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 54161
|||||| | || | || | | | | ||| | ||||| || |||| || ||||
Sbjct 11234 GGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATGG 11293
Query 54162 TCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 54221
| | || || || || || || ||||| || | || | || ||||| || | |
Sbjct 11294 CAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCACATAACGGGCAGTGTTGTTGAAGA 11353
Query 54222 CTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCAC 54281
| | | ||| ||||| | ||||||||| | || |||||||||| |||||| |||
Sbjct 11354 CACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAGGAACCAG 11413
Query 54282 TGGCACGAATATTACTAATTGAT-AGACCTATCCCCCCTGCCATTTTAGAGATTAATGCG 54340
| |||||||| | | | | | || || || || || || | || ||||| | ||
Sbjct 11414 TAGCACGAATGCAA-TGAGCGTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGCA 11472
Query 54341 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 54400
|| || | || || || || ||||| || || || || |||||| | | ||
Sbjct 11473 CAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAG 11532
Query 54401 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 54460
|| |||| ||| | | ||| || ||||| || | || ||||| ||||| ||
Sbjct 11533 CATGAGGACAATTGAGGTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTG 11592
Query 54461 AACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGA 54520
|| || || | || | || ||||| ||||| || || || || || | |||
Sbjct 11593 AAGCACTTCTGGGACATGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATGG 11652
Query 54521 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT-GTTTAT 54579
|| || ||||| |||||||| | |||||| || ||||| || | | |||||| | ||
Sbjct 11653 ATGCCAACTGCCACACGCATGAGCATGTGTTGCGGTCTCTCGGCCA-CTTGTTTGCCAAT 11711
Query 54580 TTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 54639
|| |||| || ||| |||||||||| || || || || || | ||| ||||||||
Sbjct 11712 CTTGAGCAGATATGATCTTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCG 11771
Query 54640 TTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAAT 54699
||||||| || | ||||| || | ||| || | | |||| |||| ||| |
Sbjct 11772 GTCGTAAACGATGGCCGAGTTCAGCTCATCAGCATGTCTCATAAC-ACATTCATACGTCT 11830
Query 54700 ACTTGAA-ATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCT 54758
|| | | || || ||||| || ||| || || || |||| ||||| | | ||||
Sbjct 11831 CCTGGGAGATCATAGGAGAGTGCTTCTTGTTCTTGGGGTTGATATAGTAGTAGAGATCCG 11890
Query 54759 TCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAG 54818
|| ||| | ||| |||| || || | ||||| ||||| || ||||| || | |
Sbjct 11891 ACACCACCGAAGAGAATTGTTTCTTAGTCTGCTTGTGGAGATTGGACACGGCGATACGCG 11950
Query 54819 CGGCTAGAATGGCATAATCCGGATG 54843
| || || ||||||||||| |||||
Sbjct 11951 CTGCGAGGATGGCATAATCGGGATG 11975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593714972582640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |