Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq49 102 8e-17
seq151 100 3e-16
seq201 98.7 1e-15
seq82 91.5 2e-13
>seq49
Length=72059
Score = 102 bits (112), Expect = 8e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| || |||||||| | ||||||||||| || |||| ||| ||||| || || ||
Sbjct 34692 GACAAGGAAGGCATCCCTCCTGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTTGAA 34633
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|| | ||||| || |||||||||||| ||||||||| | ||| |||| || || ||
Sbjct 34632 GATGGCCGCACTCTGTCCGACTACAACATTCAGAAGGAGTCAACGTTGCACCTGGTCCTG 34573
Query 40903 CGCTTGAGGGGCGG 40916
||| || |||| ||
Sbjct 34572 CGCCTGCGGGGAGG 34559
>seq151
Length=50061
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || | || ||||| |||||||| | || || ||| | |
Sbjct 37261 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATCACACTGGAAGTGGAATCATCA 37320
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | || || |||| ||||| || || || || |||||||
Sbjct 37321 GACACGATCGACAATGTAAAATCGAAGATTCAAGACAAGGAAGGAATTCCGCCGGACCAA 37380
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|||||| | |||| ||| || ||||| | || |||| || || |||| |||||| |||
Sbjct 37381 CAACGATTGATCTTCGCTGGAAAACAATTAGAAGACGGTCGAACTCTCAGCGACTATAAC 37440
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| | || || ||||| || | || ||| | || |||
Sbjct 37441 ATCCAGAAGGAGTCGACTCTCCATCTCGTCCTCCGATTGCGAGGTGGC 37488
Score = 98.7 bits (108), Expect = 1e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || ||||| |||||||| | || ||||| ||| |
Sbjct 37033 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 37092
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | | ||| || || | ||||| || || || || | |||||
Sbjct 37093 GATACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 37152
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||||| ||||| | || ||||| || || || |||| ||||| |||| |||||||||
Sbjct 37153 CAACGTCTCATTTTTGCCGGCAAGCAACTCGAAGACGGCCGCACTCTCAGTGACTACAAC 37212
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||| || || | || || || || ||
Sbjct 37213 ATCCAAAAAGAATCGACTCTTCACCTGGT 37241
Score = 91.5 bits (100), Expect = 2e-13
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773
|| ||||| ||||||||| |||| ||||| ||| ||| | | | | | | |||
Sbjct 36829 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAATGTAAAGTCC 36888
Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833
|| |||| ||||| || ||||| || | || || ||||| ||||| | ||| ||||||
Sbjct 36889 AAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAACAACGTCTCATTTTCGCCGGCAAA 36948
Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893
||||| || || | |||||| | | || |||||||| ||||| || | || |||||
Sbjct 36949 CAGCTCGAGGATGGCCGCACCTTGAGTGATTACAACATTCAGAAAGAATCTACCTTGCAT 37008
>seq201
Length=168916
Score = 98.7 bits (108), Expect = 1e-15
Identities = 150/213 (70%), Gaps = 3/213 (1%)
Strand=Plus/Minus
Query 116647 GTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACAC 116706
||||||| |||||||| || |||||||| | || || ||||||||||||||||||
Sbjct 78588 GTACAAACGCGCCGAGGCATCCTTCTGGACAGCTGAAGAAGTGGACCTGTCCAAGGACCT 78529
Query 116707 GAGCGACTGG---GAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGC 116763
||||||| | || | || || |||| || | ||||| ||||| || ||
Sbjct 78528 TCACGACTGGCACAATCGTCTCAATGATGACGAACGATACTTCATTTCCCACGTCCTTGC 78469
Query 116764 CTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGA 116823
|||||||| || ||||||||| |||||||| || || |||| || ||| || ||
Sbjct 78468 ATTTTTCGCTGCTTCCGACGGCATTGTCAACGAAAACCTTCTCGAACGGTTCTCTGCTGA 78409
Query 116824 GGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGG 116856
|| || | | ||||| || || ||||| ||
Sbjct 78408 AGTCCAAATCCCAGAGGCCCGTTGTTTCTATGG 78376
>seq82
Length=64492
Score = 91.5 bits (100), Expect = 2e-13
Identities = 131/182 (72%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || ||||||||||| ||||||||| | || ||||| | |||| | |
Sbjct 45430 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGATACAATC 45371
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| ||||| || || | || || || ||||||||| ||||||| || || |
Sbjct 45370 GACAACG-TCAAGTCCAAGATCCAAGATAAGGAAGGCATCCCCCCGGACCAACAGCGCTT 45312
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| ||| ||||| || || || || | || || || | || ||||||||||| ||
Sbjct 45311 GATCTTCGCCGGCAAGCAACTTGAGGATGGCCGAACACTGAGTGATTACAACATCCAAAA 45252
Query 40878 GG 40879
||
Sbjct 45251 GG 45250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515213448865680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |