Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq151 111 1e-19
seq49 82.4 5e-11
>seq151
Length=50061
Score = 111 bits (122), Expect = 1e-19
Identities = 155/214 (72%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGT--CGGACAGCTGACGGTCGT 34235
|| |||||||| | ||| |||||| || |||||||||| | || || || ||| |||
Sbjct 37244 AGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTGAGAG-TG-CGGCCGT 37187
Query 34236 CGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGT 34295
| || | |||||||| || |||||||| || || |||||| || | | |||||||
Sbjct 37186 CTTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGT 37127
Query 34296 CGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355
| ||||| ||| | || | | || | |||| | || ||||| || | |||||||
Sbjct 37126 CCTGGATCTTGGACTTCACATTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGG 37067
Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| |||||||| ||||| || || ||||| |||||
Sbjct 37066 TCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37033
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/189 (71%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACA-GCTGACGGTCGTC 34236
|| |||| || || ||| ||||||||| |||||||| || || | || ||| | ||
Sbjct 37016 AGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTCAAGGTG-CGGCCATC 36958
Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296
|| | ||| ||||| ||||||||||| || || || || || | || ||||||||
Sbjct 36957 CTCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTC 36898
Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
||||| ||||| || | | || | |||| | || ||||| || | ||||||||
Sbjct 36897 CTGAATCTTGGACTTTACATTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGT 36838
Query 34357 TTTGCCGGT 34365
||||||||
Sbjct 36837 CTTGCCGGT 36829
Score = 86.0 bits (94), Expect = 4e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || |||| ||||| || | ||| || || ||||| || |||||||| ||
Sbjct 37715 CCACCACGAAGTCTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAA 37656
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || | || ||||| ||||||||||| || || | ||||| || || ||
Sbjct 37655 AGAGTGCGTCCATCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGA 37596
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||| || || |||||| ||| | | | | || | || | ||||| ||
Sbjct 37595 ATACCCTCTTTATCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACT 37536
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||| || || || ||||| | || || ||||||||||||||
Sbjct 37535 TCCAACGTAATAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 37489
>seq49
Length=72059
Score = 82.4 bits (90), Expect = 5e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || ||||| | ||| |||||||| || || || ||||| ||||||||||||||
Sbjct 34558 TCCTCCCCGCAGGCGCAGGACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGA 34617
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
||| ||| | || || | |||||||| ||||| || || || |||||||| ||
Sbjct 34618 CAGAGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGG 34677
Query 34282 CACGCTCTCCTTGTC 34296
| || ||||||||
Sbjct 34678 GATGCCTTCCTTGTC 34692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323068483866080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |