Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq292 432 3e-116 seq151 116 3e-21 >seq292 Length=28646 Score = 432 bits (478), Expect = 3e-116 Identities = 1032/1544 (67%), Gaps = 38/1544 (2%) Strand=Plus/Plus Query 22454 TTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGT 22513 || || ||||| || || || | ||| || || || ||| |||||||| ||| | || Sbjct 10270 TTGACGACTTGGAATTCACCAGCCAACACACGACGGGAGTAGATGTTGGACGTGTATGGC 10329 Query 22514 TCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAAC 22573 ||||| |||| ||||| |||| || |||| ||| || || || ||||| || || | Sbjct 10330 TCGAAGCATTCGTTGTTGCCCAAGATTTGAGAGGTGGATGCAGTAGGCATAGGGGCAACA 10389 Query 22574 AGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGA--GCATCGACCAGTCCC 22631 || || ||||| | | || || || | ||| | | || | ||||| ||| |||| Sbjct 10390 AGGAGAGAGTTGCGAACACCATGTTTAGCAATCTCAGCTTTCAATGCATC--CCAATCCC 10447 Query 22632 ACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCG 22691 | ||||| || || || ||||| ||||||||| || || | | || | ||| Sbjct 10448 ATAGATCTGAAGGAGTAACATT---CCACATATCATACTGAAGGATACCTTGTGAGACCG 10504 Query 22692 GGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCA 22751 ||||||| || || || || || ||||| | | | ||| |||||||| ||| || Sbjct 10505 GGCTGCCCTCATAGGTCTCATAGGGACCTTGTTCCTTGGCGAGTTCGCATGACGCAGTCA 10564 Query 22752 ACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACG 22807 || | | || || || ||||| |||| |||| | || ||| || || Sbjct 10565 GAGCTGCATGGTAGATGGTTTCGAAAATTTGGATGTTGAGTTGACGGGCCTCTGGAGAG- 10623 Query 22808 CTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCG 22867 ||| | || | ||||| | ||| || || || | ||||||||| || | ||| Sbjct 10624 ---TCGAAAGGAAGACGCAAAGCAAGGAAGGCATCTGCAAGACCCTGAACACCAAGACCA 10680 Query 22868 ATCGGTCGGTTTTTCAGATTCGACACTT--TTGCCTCGGGCAAAGGATACCAATTCGAAT 22925 | ||||||| | | || | ||| | || ||||||| ||| || | || || Sbjct 10681 ACAGGTCGGTGTCGGAAGTTG--CTCTTCCTGGCTTCGGGCACAGGGTAGTAGTTGATAT 10738 Query 22926 CGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGT 22985 |||| | |||||||||||| || || | || || | |||||| Sbjct 10739 CGATGATCTTGTTCAAGTTTCGAGTGACGACTTGGGTAACTTCATGAAGACGGCCAAAGT 10798 Query 22986 CGTAAACGCCC---GATTGTACAACAAACTTGTTGACG-GCGATCGAGGCAAGATTGCAT 23041 | || | || | ||| | || || | | || | || | ||||| |||||||| Sbjct 10799 CATATTCACCTCGGGCTTGATCGACGAAGGT-TGGAAGAGCCAGAGAGGCGAGATTGCAG 10857 Query 23042 ACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTT 23101 || || | ||| ||| || ||||||| |||||||| || || |||||| | | Sbjct 10858 ACAGCGATCTCATCTGGGGCACTGTACTCGACAATTTCCGTGCACAGATTGGAGCTCCGG 10917 Query 23102 ATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTAC 23161 || || |||| || |||||||||| || ||||| | ||||||||| ||||| || Sbjct 10918 ATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATATAA 10977 Query 23162 GGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACA 23221 || || || |||||| ||| | || | |||||| ||||| |||| || | || Sbjct 10978 GGAGTCCCAGTCTCGGTCTGTGCTTCTAGGATCGCATACCACAACTTCTGGGCCTTGAC- 11036 Query 23222 CGTCGCACGTACCTG--CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCAC 23279 |||| ||| |||| || |||| ||| |||| || || | || || ||||| | | Sbjct 11037 CGTCTGACG-ACCTCGTCCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGC 11095 Query 23280 CGTA-ACAGTCGGCCAGGCCGGGCGATTGCATC-GGACACATGAGACTCCACATTGAGTC 23337 | || ||| || || ||||| || | | ||| ||||| | ||| |||| | || Sbjct 11096 CATAGACA-TCAGCAAGGCCCGGTGCCT-CATGAGGACAGAACAGAGTCCAGTCTTGGTT 11153 Query 23338 ATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGC 23397 || || || |||||||| || |||||||| |||| || || || |||| || ||||| Sbjct 11154 CTTCTCGACACGTCTCATGAATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGC 11213 Query 23398 GCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATG 23457 ||| ||||| || || ||| ||||||| ||| | || | || || || ||||| || Sbjct 11214 GCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGTG 11273 Query 23458 CCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTA 23517 ||| ||||| || || | |||||| || || || | ||||||||| ||||| || || || Sbjct 11274 CCATGGCTCCAGATAGATGGCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCACATA 11333 Query 23518 ACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTAC 23577 |||||| ||||||||| | || | ||||| || | |||||| ||||| | |||| Sbjct 11334 ACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGGT 11393 Query 23578 GCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCC 23637 || || | | ||||| | || |||| | ||| ||| || || || || || | Sbjct 11394 CCCGGCAATATAGGAACCAGTAGCACGAATGCAATGAGCGTTGAGGCCAATACCGCCAGC 11453 Query 23638 CGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTC 23697 | || || ||||| || || || ||||||||||| || ||||| ||||||||||| Sbjct 11454 AGTCTTGGAGATCATAGCACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTC 11513 Query 23698 TTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAG 23757 ||| | |||||||||| || || |||| ||| | || || || |||| |||||| Sbjct 11514 TTTCATGTCGACCAAGAAGCATGAGGACAATTGAGGTTGCGGAGTGCCGGCATTGAACAG 11573 Query 23758 TGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGC 23817 || || |||||| || ||| | | ||||| || ||||| || || || || Sbjct 11574 AGTTGGAGAGGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTCTATCGCCTT 11633 Query 23818 ATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC 23877 || ||||| ||||| || || || | || || ||||| | ||||| ||| |||||||| Sbjct 11634 CTCGATGTCATCTCCATGGATGCCAACTGCCACACGCATGAGCATGTGTTGCGGTCTCTC 11693 Query 23878 GAC--CGTG-ACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAA 23934 | | | || ||| ||| |||| ||||||||| | || || || || || || || Sbjct 11694 GGCCACTTGTTTGCC---AATCTTGAGCAGATATGATCTTTCCAAAGTCTTGAAGCCGAA 11750 Query 23935 ATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978 || | ||||| ||||| || |||| || |||||||| |||| Sbjct 11751 GTATTGGTAGTTGAAGTCTCGGTCGTAAACGATGGCCGAGTTCA 11794 >seq151 Length=50061 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| |||| ||||| || ||||| | || || ||| | || Sbjct 37261 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATCACACTGGAAGTGGAATCATCA 37320 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || ||| || || ||||||||||| | ||||| ||||| Sbjct 37321 GACACGATCGACAATGTAAAATCGAAGATTCAAGACAAGGAAGGAATTCCGCCGGACCAA 37380 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || | || |||||||| ||||| || |||||| | ||| | ||||| |||||| Sbjct 37381 CAACGATTGATCTTCGCTGGAAAACAATTAGAAGACGGTCGAACTCTCAGCGACTATAAC 37440 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || |||||||| ||||| || || Sbjct 37441 ATCCAGAAGGAGTCGACTCTCCATCTCGTCCT 37472 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||||| || ||||| || ||||| | || || || | | Sbjct 37033 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 37092 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | || || | || |||||||||||| | || |||||||| Sbjct 37093 GATACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 37152 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || || || ||||| || | |||||| ||| | || || || ||| Sbjct 37153 CAACGTCTCATTTTTGCCGGCAAGCAACTCGAAGACGGCCGCACTCTCAGTGACTACAAC 37212 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || |||||||||||||||||||| ||||| ||| | || | || |||| Sbjct 37213 ATCCAAAAAGAATCGACTCTTCACCTGGTCCTTCGTCTCCGTGGTGGTA 37261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445761424132560