Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq292 432 3e-116
seq151 116 3e-21
>seq292
Length=28646
Score = 432 bits (478), Expect = 3e-116
Identities = 1032/1544 (67%), Gaps = 38/1544 (2%)
Strand=Plus/Plus
Query 22454 TTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGT 22513
|| || ||||| || || || | ||| || || || ||| |||||||| ||| | ||
Sbjct 10270 TTGACGACTTGGAATTCACCAGCCAACACACGACGGGAGTAGATGTTGGACGTGTATGGC 10329
Query 22514 TCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAAC 22573
||||| |||| ||||| |||| || |||| ||| || || || ||||| || || |
Sbjct 10330 TCGAAGCATTCGTTGTTGCCCAAGATTTGAGAGGTGGATGCAGTAGGCATAGGGGCAACA 10389
Query 22574 AGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGA--GCATCGACCAGTCCC 22631
|| || ||||| | | || || || | ||| | | || | ||||| ||| ||||
Sbjct 10390 AGGAGAGAGTTGCGAACACCATGTTTAGCAATCTCAGCTTTCAATGCATC--CCAATCCC 10447
Query 22632 ACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCG 22691
| ||||| || || || ||||| ||||||||| || || | | || | |||
Sbjct 10448 ATAGATCTGAAGGAGTAACATT---CCACATATCATACTGAAGGATACCTTGTGAGACCG 10504
Query 22692 GGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCA 22751
||||||| || || || || || ||||| | | | ||| |||||||| ||| ||
Sbjct 10505 GGCTGCCCTCATAGGTCTCATAGGGACCTTGTTCCTTGGCGAGTTCGCATGACGCAGTCA 10564
Query 22752 ACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACG 22807
|| | | || || || ||||| |||| |||| | || ||| || ||
Sbjct 10565 GAGCTGCATGGTAGATGGTTTCGAAAATTTGGATGTTGAGTTGACGGGCCTCTGGAGAG- 10623
Query 22808 CTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCG 22867
||| | || | ||||| | ||| || || || | ||||||||| || | |||
Sbjct 10624 ---TCGAAAGGAAGACGCAAAGCAAGGAAGGCATCTGCAAGACCCTGAACACCAAGACCA 10680
Query 22868 ATCGGTCGGTTTTTCAGATTCGACACTT--TTGCCTCGGGCAAAGGATACCAATTCGAAT 22925
| ||||||| | | || | ||| | || ||||||| ||| || | || ||
Sbjct 10681 ACAGGTCGGTGTCGGAAGTTG--CTCTTCCTGGCTTCGGGCACAGGGTAGTAGTTGATAT 10738
Query 22926 CGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGT 22985
|||| | |||||||||||| || || | || || | ||||||
Sbjct 10739 CGATGATCTTGTTCAAGTTTCGAGTGACGACTTGGGTAACTTCATGAAGACGGCCAAAGT 10798
Query 22986 CGTAAACGCCC---GATTGTACAACAAACTTGTTGACG-GCGATCGAGGCAAGATTGCAT 23041
| || | || | ||| | || || | | || | || | ||||| ||||||||
Sbjct 10799 CATATTCACCTCGGGCTTGATCGACGAAGGT-TGGAAGAGCCAGAGAGGCGAGATTGCAG 10857
Query 23042 ACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTT 23101
|| || | ||| ||| || ||||||| |||||||| || || |||||| | |
Sbjct 10858 ACAGCGATCTCATCTGGGGCACTGTACTCGACAATTTCCGTGCACAGATTGGAGCTCCGG 10917
Query 23102 ATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTAC 23161
|| || |||| || |||||||||| || ||||| | ||||||||| ||||| ||
Sbjct 10918 ATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATATAA 10977
Query 23162 GGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACA 23221
|| || || |||||| ||| | || | |||||| ||||| |||| || | ||
Sbjct 10978 GGAGTCCCAGTCTCGGTCTGTGCTTCTAGGATCGCATACCACAACTTCTGGGCCTTGAC- 11036
Query 23222 CGTCGCACGTACCTG--CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCAC 23279
|||| ||| |||| || |||| ||| |||| || || | || || ||||| | |
Sbjct 11037 CGTCTGACG-ACCTCGTCCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGC 11095
Query 23280 CGTA-ACAGTCGGCCAGGCCGGGCGATTGCATC-GGACACATGAGACTCCACATTGAGTC 23337
| || ||| || || ||||| || | | ||| ||||| | ||| |||| | ||
Sbjct 11096 CATAGACA-TCAGCAAGGCCCGGTGCCT-CATGAGGACAGAACAGAGTCCAGTCTTGGTT 11153
Query 23338 ATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGC 23397
|| || || |||||||| || |||||||| |||| || || || |||| || |||||
Sbjct 11154 CTTCTCGACACGTCTCATGAATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGC 11213
Query 23398 GCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATG 23457
||| ||||| || || ||| ||||||| ||| | || | || || || ||||| ||
Sbjct 11214 GCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGTG 11273
Query 23458 CCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTA 23517
||| ||||| || || | |||||| || || || | ||||||||| ||||| || || ||
Sbjct 11274 CCATGGCTCCAGATAGATGGCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCACATA 11333
Query 23518 ACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTAC 23577
|||||| ||||||||| | || | ||||| || | |||||| ||||| | ||||
Sbjct 11334 ACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGGT 11393
Query 23578 GCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCC 23637
|| || | | ||||| | || |||| | ||| ||| || || || || || |
Sbjct 11394 CCCGGCAATATAGGAACCAGTAGCACGAATGCAATGAGCGTTGAGGCCAATACCGCCAGC 11453
Query 23638 CGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTC 23697
| || || ||||| || || || ||||||||||| || ||||| |||||||||||
Sbjct 11454 AGTCTTGGAGATCATAGCACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTC 11513
Query 23698 TTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAG 23757
||| | |||||||||| || || |||| ||| | || || || |||| ||||||
Sbjct 11514 TTTCATGTCGACCAAGAAGCATGAGGACAATTGAGGTTGCGGAGTGCCGGCATTGAACAG 11573
Query 23758 TGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGC 23817
|| || |||||| || ||| | | ||||| || ||||| || || || ||
Sbjct 11574 AGTTGGAGAGGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTCTATCGCCTT 11633
Query 23818 ATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC 23877
|| ||||| ||||| || || || | || || ||||| | ||||| ||| ||||||||
Sbjct 11634 CTCGATGTCATCTCCATGGATGCCAACTGCCACACGCATGAGCATGTGTTGCGGTCTCTC 11693
Query 23878 GAC--CGTG-ACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAA 23934
| | | || ||| ||| |||| ||||||||| | || || || || || || ||
Sbjct 11694 GGCCACTTGTTTGCC---AATCTTGAGCAGATATGATCTTTCCAAAGTCTTGAAGCCGAA 11750
Query 23935 ATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978
|| | ||||| ||||| || |||| || |||||||| ||||
Sbjct 11751 GTATTGGTAGTTGAAGTCTCGGTCGTAAACGATGGCCGAGTTCA 11794
>seq151
Length=50061
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| || || ||||| |||| ||||| || ||||| | || || ||| | ||
Sbjct 37261 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATCACACTGGAAGTGGAATCATCA 37320
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || ||| || || ||||||||||| | ||||| |||||
Sbjct 37321 GACACGATCGACAATGTAAAATCGAAGATTCAAGACAAGGAAGGAATTCCGCCGGACCAA 37380
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| || | || |||||||| ||||| || |||||| | ||| | ||||| ||||||
Sbjct 37381 CAACGATTGATCTTCGCTGGAAAACAATTAGAAGACGGTCGAACTCTCAGCGACTATAAC 37440
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || || || |||||||| ||||| || ||
Sbjct 37441 ATCCAGAAGGAGTCGACTCTCCATCTCGTCCT 37472
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| |||||||| || ||||| || ||||| | || || || | |
Sbjct 37033 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 37092
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | || || | || |||||||||||| | || ||||||||
Sbjct 37093 GATACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 37152
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| ||||| || || || ||||| || | |||||| ||| | || || || |||
Sbjct 37153 CAACGTCTCATTTTTGCCGGCAAGCAACTCGAAGACGGCCGCACTCTCAGTGACTACAAC 37212
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| |||||||||||||||||||| ||||| ||| | || | || ||||
Sbjct 37213 ATCCAAAAAGAATCGACTCTTCACCTGGTCCTTCGTCTCCGTGGTGGTA 37261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445761424132560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |