Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq292 176 6e-39
>seq292
Length=28646
Score = 176 bits (194), Expect = 6e-39
Identities = 672/1045 (64%), Gaps = 10/1045 (1%)
Strand=Plus/Plus
Query 63042 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 63101
|| || ||||| ||||| || |||||||| ||||| || | ||||| ||||| || ||
Sbjct 10936 TGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATATAAGGAGTCCCAGTCTCGGTC 10995
Query 63102 TGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGATTTGTATCTCCT 63160
|| | ||||| ||||| | ||| | | || | ||||| | | | | ||| |
Sbjct 10996 TGTGCTTCTAGGATCGCATACCACAACTTCTGG-GCCTTGACCGTC--TGACGACCTCGT 11052
Query 63161 TTCTCTTTCGTATAGAGT--ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT 63218
||||||| ||| || ||| | ||||| || || || | |||| | |
Sbjct 11053 CCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGCCATAGACATCAGCAAGG 11112
Query 63219 CTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63278
| || |||| ||||| | || | ||| ||| || | || || ||| ||||
Sbjct 11113 CCCGGTGCCTCATGAGGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGTCTCATG 11172
Query 63279 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCT 63338
|| ||||| ||| ||||||| || ||| | || | | | | || || |||||
Sbjct 11173 AATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCG 11232
Query 63339 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63398
|||||| | || | || | | | | ||| | ||||| || |||| || |||
Sbjct 11233 TGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATG 11292
Query 63399 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63458
|| | | || || || || || || ||||| || | || | || ||||| || |
Sbjct 11293 GCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCACATAACGGGCAGTGTTGTTGAAG 11352
Query 63459 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCA 63518
|| | | ||| ||||| | ||| || || | || ||||| |||| |||||| |||
Sbjct 11353 ACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAGGAACCA 11412
Query 63519 CTGGCACGAATATTACTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 63577
| |||||||| | | | | | || || || || || || | || ||||| | ||
Sbjct 11413 GTAGCACGAATGCAA-TGAGCGTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGC 11471
Query 63578 GCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAA 63637
|| || | ||||| || || || || ||||| || || |||||| | | ||
Sbjct 11472 ACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAA 11531
Query 63638 ACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 63697
|| |||| ||| | | | ||| || ||||| || | || ||||| ||||| ||
Sbjct 11532 GCATGAGGACAATTGAGGTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGT 11591
Query 63698 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATG 63757
|| || || | || | || ||||| ||||| || || || || || | |||
Sbjct 11592 GAAGCACTTCTGGGACATGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATG 11651
Query 63758 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTAT 63817
|| || ||||| |||||||| | |||||| || ||||| || | | || ||| ||
Sbjct 11652 GATGCCAACTGCCACACGCATGAGCATGTGTTGCGGTCTCTCGGCCACTTGTTTGCCAAT 11711
Query 63818 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 63877
|| | || || ||| |||||||||| || || || || || | ||| ||||||||
Sbjct 11712 CTTGAGCAGATATGATCTTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCG 11771
Query 63878 TTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAAT 63937
||||||| || |||| || |||| ||| || | | |||| | || ||| |
Sbjct 11772 GTCGTAAACGATGGCCGAGTTCAGCTCATCAGCATGTCTCATAAC-ACATTCATACGTCT 11830
Query 63938 ACTTGAA-ATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCT 63996
|| | | || || ||||| || ||| || || || || | ||||| | | | ||||
Sbjct 11831 CCTGGGAGATCATAGGAGAGTGCTTCTTGTTCTTGGGGTTGATATAGTAGTAGAGATCCG 11890
Query 63997 CCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGG 64056
|| ||| | ||| |||| || || | |||||| ||||| || | ||| || | |
Sbjct 11891 ACACCACCGAAGAGAATTGTTTCTTAGTCTGCTTGTGGAGATTGGACACGGCGATACGCG 11950
Query 64057 CGGCTAGAATGGCATAATCCGGATG 64081
| || || ||||||||||| |||||
Sbjct 11951 CTGCGAGGATGGCATAATCGGGATG 11975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629810569661040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |