Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq292 203 4e-47
>seq292
Length=28646
Score = 203 bits (224), Expect = 4e-47
Identities = 680/1046 (65%), Gaps = 12/1046 (1%)
Strand=Plus/Plus
Query 65835 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 65894
|| || ||||| ||||| || |||||||| ||||| || | ||||| ||||| || ||
Sbjct 10936 TGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATATAAGGAGTCCCAGTCTCGGTC 10995
Query 65895 TGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGATTTGTATCTCTT 65953
|| | ||||| ||||| | ||| | | || | ||||| | | | | ||| |
Sbjct 10996 TGTGCTTCTAGGATCGCATACCACAACTTCTGG-GCCTTGACCGTC--TGACGACCTCGT 11052
Query 65954 TTCTCTTTCGTATAGTGT--ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT 66011
||||||| ||| ||| ||| | ||||| || || || | |||| | |
Sbjct 11053 CCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGCCATAGACATCAGCAAGG 11112
Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071
|| || |||| ||||| | || | ||| ||| || | || || ||| ||||
Sbjct 11113 CCCGGTGCCTCATGAGGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGTCTCATG 11172
Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131
|| ||||| ||| ||||||| || ||| || || | || | | || || |||||
Sbjct 11173 AATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCG 11232
Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191
|||||| | || | || | | | | ||| ||||| || |||| || |||
Sbjct 11233 TGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATG 11292
Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251
|| | | || || || || || || ||||| || | || | || ||||| || |
Sbjct 11293 GCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCACATAACGGGCAGTGTTGTTGAAG 11352
Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 66311
|| | | ||| ||||| | ||||||||| || || |||||||||| |||||| |||
Sbjct 11353 ACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAGGAACCA 11412
Query 66312 CTTGCACGAATATTACTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 66370
| |||||||| | | | | | || || || || || || | || ||||| | ||
Sbjct 11413 GTAGCACGAATGCAA-TGAGCGTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGC 11471
Query 66371 GCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 66430
|| || | || || || || ||||| || || || || |||||| | | ||
Sbjct 11472 ACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAA 11531
Query 66431 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 66490
|| |||| ||| | | ||| || ||||| || | || ||||| ||||| ||
Sbjct 11532 GCATGAGGACAATTGAGGTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGT 11591
Query 66491 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATG 66550
|| || || | || | || ||||| ||||| || || || || || | |||
Sbjct 11592 GAAGCACTTCTGGGACATGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATG 11651
Query 66551 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT-GTTTA 66609
|| || ||||| |||||||| | |||||| || ||||| || | | |||||| | |
Sbjct 11652 GATGCCAACTGCCACACGCATGAGCATGTGTTGCGGTCTCTCGGCCA-CTTGTTTGCCAA 11710
Query 66610 TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 66669
| || | || || ||| |||||||||| || || || || || | ||| |||||||
Sbjct 11711 TCTTGAGCAGATATGATCTTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTC 11770
Query 66670 GTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAA 66729
| ||||||| || ||||||| || | ||| || | | |||| |||| |||
Sbjct 11771 GGTCGTAAACGATGGCCGAGTTCAGCTCATCAGCATGTCTCATAAC-ACATTCATACGTC 11829
Query 66730 TACTTGAA-ATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCC 66788
| || | | || || ||||| || ||| || || || |||| ||||| | | | ||||
Sbjct 11830 TCCTGGGAGATCATAGGAGAGTGCTTCTTGTTCTTGGGGTTGATATAGTAGTAGAGATCC 11889
Query 66789 TCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTA 66848
|| ||| | ||| |||| || || | ||||| ||||| || ||||| || |
Sbjct 11890 GACACCACCGAAGAGAATTGTTTCTTAGTCTGCTTGTGGAGATTGGACACGGCGATACGC 11949
Query 66849 GCGGCTATAATGGCATAATCCGGATG 66874
|| || | ||||||||||| |||||
Sbjct 11950 GCTGCGAGGATGGCATAATCGGGATG 11975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658165453146120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |