Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq292 241 2e-58 >seq292 Length=28646 Score = 241 bits (266), Expect = 2e-58 Identities = 1315/2073 (63%), Gaps = 41/2073 (2%) Strand=Plus/Plus Query 78706 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 78765 |||| ||| | ||||||||||| || || | || | | ||||| || ||||||||| Sbjct 9919 TCCTGGTCGACGGTGAATTGAATAGGGGCTGTAGCAGCCATAGTACGGAGGTAGTACATT 9978 Query 78766 CCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTC 78825 || || || || || | |||| || ||| ||||| || | ||| | | Sbjct 9979 CCAGTCTTCAGCCCCATCTTCCAGCCAGCGAAGTGCATGGATGTGATCTTGCCCATAGTG 10038 Query 78826 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 78885 || || | |||||| || | |||||| |||||| ||||| || || | ||| ||| Sbjct 10039 GGCTCCTTGAGATGGATGTTGAGAGATTGGGATTGATCAATGAAAGCACCACGGTCAGCA 10098 Query 78886 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 78945 ||||| | | || || ||| |||||||| | || || || | || || Sbjct 10099 GCCATCTGGAGGACGGTGCGTTGGCTGATTTCCCAGACCGTCTTGTATAGAGCTTTGATG 10158 Query 78946 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 79002 || | || | ||| | | ||||||||||| || || || || || || || ||||| Sbjct 10159 TCAGCAGGGATGTTGGGGATGTTCTGAATGGAGCCGCCTTCCGCAATGATTCTGTTCTTC 10218 Query 79003 ATCTCTTCATTCCATAATTTTCTCTCGGTTAA--AACTC--TAAGGAGATGCGGATTAAC 79058 || | || ||| | | ||| || || || | | ||| ||||| || Sbjct 10219 ATGTTGTCGGACCAGAGAC----CAAGGTCAACCAAATCCTTCAAGAGCCAGGGATTGAC 10274 Query 79059 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCAC 79118 ||||| ||||| |||| ||| || | || | ||| || || || ||||| || | Sbjct 10275 GACTTGGAATTCACCAGCCAACACACGACGGGAGTAGATGTTGGACGTGTATGGCTCGAA 10334 Query 79119 CGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAA 79178 |||| || || ||||| ||||||| || ||||| || |||||||| || || | | Sbjct 10335 GCATTCGTTGTTGCCCAAGATTTGAGAGGTGGATGCAGTAGGCATAGGGGCAACAAGGAG 10394 Query 79179 ACTATTTCTAAGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCCAAAGA 79236 | || | || ||| ||| | | || | | |||| | | ||||||||||| ||| Sbjct 10395 AGAGTTGCGAACACC--ATGTTTAGCAATCTCAGCTTTCAATGCATCCCAATCCCATAGA 10452 Query 79237 TCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGT-TACTAGCGTATGATCC 79295 || || || ||||||||| | |||||| || || ||||| | | | || || Sbjct 10453 TCTGAAGGAGTAACATTCCACATATCATACTGAAGGATACCTTGTGAGACCGGGCTGCCC 10512 Query 79296 TGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCC 79355 | || || ||||| || |||| | | ||| | ||| || ||| | ||| | Sbjct 10513 TCA-TAGGTCTCATAGGGACCTTGTTCCTTGGCGAGTTCGCATGACGCAGTCAGAGCTGC 10571 Query 79356 GTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGG 79415 | || |||||||||||||| | | ||||| | | || ||| | || || || Sbjct 10572 ATGGTAGATGGTTTCGAAAATTTGGATGTTGAGTTGACGGGCCTCTGGAGAGTCGAAAGG 10631 Query 79416 ATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATG 79475 | | || || || || ||||| | || |||||||||| ||| | ||||| || Sbjct 10632 AAGACGCAAAGCAAGGAAGGCATCTGCAAGACCCTGAACACCAAGACCAACAGGTCGGTG 10691 Query 79476 TCTCTTATTAGAAATTTCAG-CTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 79534 || || | || | | |||| || | ||| || || || ||||| || || || | Sbjct 10692 TCGGAAGTT-GCTCTTCCTGGCTTCGGGCACAGGGTAGTAGTTGATATCGATGATCTTGT 10750 Query 79535 TGAGATTCCTGACT-ATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAAT---CGT 79590 | | || | || | | |||| | || || | || | ||| ||| || | | Sbjct 10751 TCAAGTTTC-GAGTGACGACTTGGGTAACTTCATGAAGACGGCCAAAGTCATATTCACCT 10809 Query 79591 CCATCT--ATT-ACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCA 79647 | || || || || | | || | ||| || ||||| || || || | |||| Sbjct 10810 CGGGCTTGATCGACGAAGGTTGGAAGAGCCAGAGAGGCGAGATTGCAGACAGCGATCTCA 10869 Query 79648 TTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAA 79707 | | | || | | ||||| ||||| || || | | || || || | Sbjct 10870 TCTGGGGCACTGTACTCGACAATTTCCGTGCACAGATTGGAGCTCCGGATTGTCCCCAGG 10929 Query 79708 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTT 79767 || | || || ||||| ||||| || |||||||| ||||| || | ||||| ||||| Sbjct 10930 TTCTTCTGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATATAAGGAGTCCCAGTC 10989 Query 79768 TCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATA-GACTTGT 79825 || |||| | ||||| ||||| | ||| | | || | ||||| | | ||| Sbjct 10990 TCGGTCTGTGCTTCTAGGATCGCATACCACAACTTCTGG-GCCTTGACCGTCTGACG--- 11045 Query 79826 ATCTCTTTTCTCTTTCGTATTGTGTATATAATCGT--TCGAACTCGTCTCCCCAAACATC 79883 | ||| | ||||||| || ||| ||| | ||||| || || || | ||||| Sbjct 11046 ACCTCGTCCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGCCATAGACATC 11105 Query 79884 GTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCG 79943 | | || || || | |||||| | || | ||| ||| | | || || || Sbjct 11106 AGCAAGGCCCGGTGCCTCATGAGGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACG 11165 Query 79944 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTC 80003 | |||| || ||||| ||| ||||||| || ||| | || | || | | ||| || Sbjct 11166 TCTCATGAATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTC 11225 Query 80004 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 80063 ||||| |||||| | || | || | | | | ||| | ||||| || |||| Sbjct 11226 CTTTCCGTGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAG 11285 Query 80064 GTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 80123 || ||||| | | || || || || || || ||||| || | || | || ||||| Sbjct 11286 ATAGATGGCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCACATAACGGGCAGTGTT 11345 Query 80124 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATA 80183 || | || | | ||| ||||| | ||||||||| || || |||||||||| ||||| Sbjct 11346 GTTGAAGACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATA 11405 Query 80184 GCTTCCACTGGCACGAATATTACTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGA 80242 | ||| | |||||||| | | | | | || || || || || || | || |||| Sbjct 11406 GGAACCAGTAGCACGAATGCAA-TGAGCGTTGAGGCCAATACCGCCAGCAGTCTTGGAGA 11464 Query 80243 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAA 80302 | | || || || | || || || || ||||| ||||| || || |||||| | Sbjct 11465 TCATAGCACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGA 11524 Query 80303 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 80362 | || || |||| ||| | | ||| || ||||| || | || ||||| | Sbjct 11525 CCAAGAAGCATGAGGACAATTGAGGTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGG 11584 Query 80363 CGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCC 80422 |||| || || || || | |||| || ||||| ||||| || || || || || Sbjct 11585 CGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCAT 11644 Query 80423 ATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 80482 | ||| || || || || |||||||| | |||||| || ||||| || | | ||||| Sbjct 11645 CTCCATGGATGCCAACTGCCACACGCATGAGCATGTGTTGCGGTCTCTCGGCCA-CTTGT 11703 Query 80483 TATTTATT-TTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 80541 | | | || | || || ||| |||||||||| || || || || || | ||| Sbjct 11704 TTGCCAATCTTGAGCAGATATGATCTTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTG 11763 Query 80542 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCC 80601 |||||||| ||||||| || ||||||| || | ||| || | | |||| |||| | Sbjct 11764 AAGTCTCGGTCGTAAACGATGGCCGAGTTCAGCTCATCAGCATGTCTCATAAC-ACATTC 11822 Query 80602 ATGGTGATACTTGAA-ATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAA 80660 || | || | | || || ||||| || ||| || || || || | ||||| | | Sbjct 11823 ATACGTCTCCTGGGAGATCATAGGAGAGTGCTTCTTGTTCTTGGGGTTGATATAGTAGTA 11882 Query 80661 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGC 80720 | |||| || ||| | ||| |||| || || | |||||| ||||| || ||||| Sbjct 11883 GAGATCCGACACCACCGAAGAGAATTGTTTCTTAGTCTGCTTGTGGAGATTGGACACGGC 11942 Query 80721 TATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 || | || || | ||||||||||| ||||| Sbjct 11943 GATACGCGCTGCGAGGATGGCATAATCGGGATG 11975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718260782324520