Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq292 241 2e-58
>seq292
Length=28646
Score = 241 bits (266), Expect = 2e-58
Identities = 1315/2073 (63%), Gaps = 41/2073 (2%)
Strand=Plus/Plus
Query 78706 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 78765
|||| ||| | ||||||||||| || || | || | | ||||| || |||||||||
Sbjct 9919 TCCTGGTCGACGGTGAATTGAATAGGGGCTGTAGCAGCCATAGTACGGAGGTAGTACATT 9978
Query 78766 CCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTC 78825
|| || || || || | |||| || ||| ||||| || | ||| | |
Sbjct 9979 CCAGTCTTCAGCCCCATCTTCCAGCCAGCGAAGTGCATGGATGTGATCTTGCCCATAGTG 10038
Query 78826 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 78885
|| || | |||||| || | |||||| |||||| ||||| || || | ||| |||
Sbjct 10039 GGCTCCTTGAGATGGATGTTGAGAGATTGGGATTGATCAATGAAAGCACCACGGTCAGCA 10098
Query 78886 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 78945
||||| | | || || ||| |||||||| | || || || | || ||
Sbjct 10099 GCCATCTGGAGGACGGTGCGTTGGCTGATTTCCCAGACCGTCTTGTATAGAGCTTTGATG 10158
Query 78946 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 79002
|| | || | ||| | | ||||||||||| || || || || || || || |||||
Sbjct 10159 TCAGCAGGGATGTTGGGGATGTTCTGAATGGAGCCGCCTTCCGCAATGATTCTGTTCTTC 10218
Query 79003 ATCTCTTCATTCCATAATTTTCTCTCGGTTAA--AACTC--TAAGGAGATGCGGATTAAC 79058
|| | || ||| | | ||| || || || | | ||| ||||| ||
Sbjct 10219 ATGTTGTCGGACCAGAGAC----CAAGGTCAACCAAATCCTTCAAGAGCCAGGGATTGAC 10274
Query 79059 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCAC 79118
||||| ||||| |||| ||| || | || | ||| || || || ||||| || |
Sbjct 10275 GACTTGGAATTCACCAGCCAACACACGACGGGAGTAGATGTTGGACGTGTATGGCTCGAA 10334
Query 79119 CGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAA 79178
|||| || || ||||| ||||||| || ||||| || |||||||| || || | |
Sbjct 10335 GCATTCGTTGTTGCCCAAGATTTGAGAGGTGGATGCAGTAGGCATAGGGGCAACAAGGAG 10394
Query 79179 ACTATTTCTAAGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCCAAAGA 79236
| || | || ||| ||| | | || | | |||| | | ||||||||||| |||
Sbjct 10395 AGAGTTGCGAACACC--ATGTTTAGCAATCTCAGCTTTCAATGCATCCCAATCCCATAGA 10452
Query 79237 TCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGT-TACTAGCGTATGATCC 79295
|| || || ||||||||| | |||||| || || ||||| | | | || ||
Sbjct 10453 TCTGAAGGAGTAACATTCCACATATCATACTGAAGGATACCTTGTGAGACCGGGCTGCCC 10512
Query 79296 TGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCC 79355
| || || ||||| || |||| | | ||| | ||| || ||| | ||| |
Sbjct 10513 TCA-TAGGTCTCATAGGGACCTTGTTCCTTGGCGAGTTCGCATGACGCAGTCAGAGCTGC 10571
Query 79356 GTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGG 79415
| || |||||||||||||| | | ||||| | | || ||| | || || ||
Sbjct 10572 ATGGTAGATGGTTTCGAAAATTTGGATGTTGAGTTGACGGGCCTCTGGAGAGTCGAAAGG 10631
Query 79416 ATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATG 79475
| | || || || || ||||| | || |||||||||| ||| | ||||| ||
Sbjct 10632 AAGACGCAAAGCAAGGAAGGCATCTGCAAGACCCTGAACACCAAGACCAACAGGTCGGTG 10691
Query 79476 TCTCTTATTAGAAATTTCAG-CTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 79534
|| || | || | | |||| || | ||| || || || ||||| || || || |
Sbjct 10692 TCGGAAGTT-GCTCTTCCTGGCTTCGGGCACAGGGTAGTAGTTGATATCGATGATCTTGT 10750
Query 79535 TGAGATTCCTGACT-ATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAAT---CGT 79590
| | || | || | | |||| | || || | || | ||| ||| || | |
Sbjct 10751 TCAAGTTTC-GAGTGACGACTTGGGTAACTTCATGAAGACGGCCAAAGTCATATTCACCT 10809
Query 79591 CCATCT--ATT-ACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCA 79647
| || || || || | | || | ||| || ||||| || || || | ||||
Sbjct 10810 CGGGCTTGATCGACGAAGGTTGGAAGAGCCAGAGAGGCGAGATTGCAGACAGCGATCTCA 10869
Query 79648 TTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAA 79707
| | | || | | ||||| ||||| || || | | || || || |
Sbjct 10870 TCTGGGGCACTGTACTCGACAATTTCCGTGCACAGATTGGAGCTCCGGATTGTCCCCAGG 10929
Query 79708 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTT 79767
|| | || || ||||| ||||| || |||||||| ||||| || | ||||| |||||
Sbjct 10930 TTCTTCTGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATATAAGGAGTCCCAGTC 10989
Query 79768 TCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATA-GACTTGT 79825
|| |||| | ||||| ||||| | ||| | | || | ||||| | | |||
Sbjct 10990 TCGGTCTGTGCTTCTAGGATCGCATACCACAACTTCTGG-GCCTTGACCGTCTGACG--- 11045
Query 79826 ATCTCTTTTCTCTTTCGTATTGTGTATATAATCGT--TCGAACTCGTCTCCCCAAACATC 79883
| ||| | ||||||| || ||| ||| | ||||| || || || | |||||
Sbjct 11046 ACCTCGTCCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGCCATAGACATC 11105
Query 79884 GTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCG 79943
| | || || || | |||||| | || | ||| ||| | | || || ||
Sbjct 11106 AGCAAGGCCCGGTGCCTCATGAGGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACG 11165
Query 79944 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTC 80003
| |||| || ||||| ||| ||||||| || ||| | || | || | | ||| ||
Sbjct 11166 TCTCATGAATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTC 11225
Query 80004 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 80063
||||| |||||| | || | || | | | | ||| | ||||| || ||||
Sbjct 11226 CTTTCCGTGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAG 11285
Query 80064 GTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 80123
|| ||||| | | || || || || || || ||||| || | || | || |||||
Sbjct 11286 ATAGATGGCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCACATAACGGGCAGTGTT 11345
Query 80124 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATA 80183
|| | || | | ||| ||||| | ||||||||| || || |||||||||| |||||
Sbjct 11346 GTTGAAGACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATA 11405
Query 80184 GCTTCCACTGGCACGAATATTACTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGA 80242
| ||| | |||||||| | | | | | || || || || || || | || ||||
Sbjct 11406 GGAACCAGTAGCACGAATGCAA-TGAGCGTTGAGGCCAATACCGCCAGCAGTCTTGGAGA 11464
Query 80243 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAA 80302
| | || || || | || || || || ||||| ||||| || || |||||| |
Sbjct 11465 TCATAGCACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGA 11524
Query 80303 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 80362
| || || |||| ||| | | ||| || ||||| || | || ||||| |
Sbjct 11525 CCAAGAAGCATGAGGACAATTGAGGTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGG 11584
Query 80363 CGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCC 80422
|||| || || || || | |||| || ||||| ||||| || || || || ||
Sbjct 11585 CGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCAT 11644
Query 80423 ATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 80482
| ||| || || || || |||||||| | |||||| || ||||| || | | |||||
Sbjct 11645 CTCCATGGATGCCAACTGCCACACGCATGAGCATGTGTTGCGGTCTCTCGGCCA-CTTGT 11703
Query 80483 TATTTATT-TTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 80541
| | | || | || || ||| |||||||||| || || || || || | |||
Sbjct 11704 TTGCCAATCTTGAGCAGATATGATCTTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTG 11763
Query 80542 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCC 80601
|||||||| ||||||| || ||||||| || | ||| || | | |||| |||| |
Sbjct 11764 AAGTCTCGGTCGTAAACGATGGCCGAGTTCAGCTCATCAGCATGTCTCATAAC-ACATTC 11822
Query 80602 ATGGTGATACTTGAA-ATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAA 80660
|| | || | | || || ||||| || ||| || || || || | ||||| | |
Sbjct 11823 ATACGTCTCCTGGGAGATCATAGGAGAGTGCTTCTTGTTCTTGGGGTTGATATAGTAGTA 11882
Query 80661 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGC 80720
| |||| || ||| | ||| |||| || || | |||||| ||||| || |||||
Sbjct 11883 GAGATCCGACACCACCGAAGAGAATTGTTTCTTAGTCTGCTTGTGGAGATTGGACACGGC 11942
Query 80721 TATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753
|| | || || | ||||||||||| |||||
Sbjct 11943 GATACGCGCTGCGAGGATGGCATAATCGGGATG 11975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718260782324520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |