Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq292 185 1e-41
>seq292
Length=28646
Score = 185 bits (204), Expect = 1e-41
Identities = 704/1093 (64%), Gaps = 14/1093 (1%)
Strand=Plus/Plus
Query 71751 AATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTT 71810
|||||| ||||| ||||| | | ||| || || | || | || || ||||| ||
Sbjct 10890 AATTTCCGTGCACAGATTGGAGCTCCGGATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTT 10949
Query 71811 GTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAAT 71870
||| || |||||||| ||||| ||| | ||||| ||||| || |||| | ||||| ||
Sbjct 10950 GTTGCAGGCATCCTTGTAAAGCATATAAGGAGTCCCAGTCTCGGTCTGTGCTTCTAGGAT 11009
Query 71871 CGCTTTCCAGA-CGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATT 71929
||| | ||| | | || | ||||| | | | | ||| | ||||||| ||
Sbjct 11010 CGCATACCACAACTTCTGG-GCCTTGACCGTCTGACG--ACCTCGTCCCTCTTTCTCATA 11066
Query 71930 GTGTATATAATCGT--TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATT 71987
||| ||| | ||||| || || || | ||| | | || || ||||
Sbjct 11067 CTGTTCATAGAGGGCATCGAATTCCTCGCCATAGACATCAGCAAGGCCCGGTGCCTCATG 11126
Query 71988 CGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAAT 72047
||||| | || | ||| ||| | | | || ||| |||| || ||||| ||| |
Sbjct 11127 AGGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGTCTCATGAATAGATCCGGAGT 11186
Query 72048 CCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAG 72107
|||||| || ||| | || | || | | ||| || ||||| |||||| | ||
Sbjct 11187 CCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAG 11246
Query 72108 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGG 72167
| || | | | | ||| | ||||| || |||| || ||||| | | || ||
Sbjct 11247 GTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACCGGG 11306
Query 72168 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 72227
|| || || || ||||| || | || | || ||||| || | || | | ||| ||
Sbjct 11307 ACGCTTATTGCCACCCTGGTCCACATAACGGGCAGTGTTGTTGAAGACACGAAGCATGGG 11366
Query 72228 AATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--A 72285
||| | ||||||||| | || |||||||||| |||||| ||| | |||||||| |
Sbjct 11367 AATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAGGAACCAGTAGCACGAATGCA 11426
Query 72286 TTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 72345
|| |||| | || || || || || | || ||||| | || || || |
Sbjct 11427 ATGAGCGTTGA--GGCCAATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTTGAGA 11484
Query 72346 GTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATT 72405
|| || || || ||||| || || || || |||||| | | || || |||| |
Sbjct 11485 GTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAAT 11544
Query 72406 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 72465
|| | | ||| || ||||| || | || ||||| ||||| || || || || |
Sbjct 11545 TGAGGTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTTCTGG 11604
Query 72466 GACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCG 72525
|||| || ||||| ||||| || || || || || | ||| || || || ||
Sbjct 11605 GACATGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATGGATGCCAACTGCC 11664
Query 72526 ACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATT-TTCAACAAGTA 72584
|||||||| | ||| || || ||||| || | | |||||| | | || | || ||
Sbjct 11665 ACACGCATGAGCATGTGTTGCGGTCTCTCGGCCA-CTTGTTTGCCAATCTTGAGCAGATA 11723
Query 72585 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 72644
||| |||||||||| || || || || || | ||| |||||||| ||||||| ||
Sbjct 11724 TGATCTTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCGGTCGTAAACGAT 11783
Query 72645 AACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAA-ATAA 72703
|||| || || | ||| || | | |||| | || ||| | || | | || |
Sbjct 11784 GGCCGAGTTCAGCTCATCAGCATGTCTCATAAC-ACATTCATACGTCTCCTGGGAGATCA 11842
Query 72704 TCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCAC 72763
| ||||| || ||| || || || || | ||||| | | | |||| || ||| |
Sbjct 11843 TAGGAGAGTGCTTCTTGTTCTTGGGGTTGATATAGTAGTAGAGATCCGACACCACCGAAG 11902
Query 72764 TAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGG 72823
||| |||| || || | |||||| ||||| || ||||| || | || || || ||||
Sbjct 11903 AGAATTGTTTCTTAGTCTGCTTGTGGAGATTGGACACGGCGATACGCGCTGCGAGGATGG 11962
Query 72824 CATAATCTGGATG 72836
||||||| |||||
Sbjct 11963 CATAATCGGGATG 11975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671131708408680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |