Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq292 132 7e-26
>seq292
Length=28646
Score = 132 bits (146), Expect = 7e-26
Identities = 328/489 (67%), Gaps = 14/489 (3%)
Strand=Plus/Minus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| |||||||| || || || || | ||| |||| |||| || |||||||||||
Sbjct 11324 CAGGGTGGCAATAAGCGTCCCGGTGCCTTTGCCATCTATCTGGAGCCATGGCACGCGGAT 11265
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| || || | | | || | || ||| || ||||||| || ||| | |||
Sbjct 11264 GTCTTCGATTGGCTGAACCTGAGAAAGAACCACGGAAAGGAAGAGGTTCGCGCCCGTGAC 11205
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC---AACGACGGTGGC 97052
|||||||||||||| ||| || ||| | ||||||| || ||| || || |
Sbjct 11204 TTGTTTTATGCACTTTGGACTCCGGATCTATTCATGAGACGTGTCGAGAAGAACCAAG-- 11147
Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112
|||||| || | || || | | |||| || || | ||| || ||||| ||
Sbjct 11146 -ACTGGACTCTGTTCTGTCCTCATGAGGCACCGGGCCTTGCTGATGTCTATGGCGAGGAA 11088
Query 97113 TTTGAGGCCAAGTAC--ACGGCCTACGAGCAAGAGGGCCGATA-CGTGAGACGAGTCGAT 97169
|| || ||| || || | || ||| ||||||| ||| ||| ||||| ||| |
Sbjct 11087 TTCGATGCCCTCTATGAACAG--TATGAGAAAGAGGGACGAGGTCGTCAGACG-GTCAAG 11031
Query 97170 GCACGAGAACT-GTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACAT 97228
|| | |||| | |||| | || ||| | || ||| |||||||| ||||| || ||
Sbjct 11030 GCCC-AGAAGTTGTGGTATGCGATCCTAGAAGCACAGACCGAGACTGGGACTCCTTATAT 10972
Query 97229 TCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGG 97288
|| ||||||||| || || || |||||||| || |||| || ||| | |
Sbjct 10971 GCTTTACAAGGATGCCTGCAACAAGAAGAGCAACCAGAAGAACCTGGGGACAATCCGGAG 10912
Query 97289 CTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGT 97348
|||||||||||||||||||||||| |||||| | || || |||| || || |||
Sbjct 10911 CTCCAATCTGTGCACGGAAATTGTCGAGTACAGTGCCCCAGATGAGATCGCTGTCTGCAA 10852
Query 97349 TCTGGCATC 97357
||| || ||
Sbjct 10851 TCTCGCCTC 10843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741050927926680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |