Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq151 134 3e-26
>seq151
Length=50061
Score = 134 bits (148), Expect = 3e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | || || || ||||| || |||||||| ||||||| |||||||
Sbjct 37472 AGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGCTGAGAGTTCGACCGTCT 37413
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|||| |||||||||||| || || | | ||||| || || || |||||||| || ||
Sbjct 37412 TCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCGGAATTCCTTCCTTGTCT 37353
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|||||||| | ||||||||| || | || || | ||| || || ||||| || |||
Sbjct 37352 TGAATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTCCACTTCCAGTGTGATGGTC 37293
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| ||||| | || || ||||| || |||||
Sbjct 37292 TTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 37261
Score = 129 bits (142), Expect = 1e-24
Identities = 142/189 (75%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || | ||| || ||||||||||||||||| || || ||| | || | || ||
Sbjct 37017 AAGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTCAAGGTGCGGCCATC 36958
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || ||||| || || ||||| || | |||||||||||||| || ||||| || ||
Sbjct 36957 CTCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTC 36898
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
||||||||| | |||||||| || | ||||||||| | || ||||| || || || ||
Sbjct 36897 CTGAATCTTGGACTTTACATTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGT 36838
Query 104527 CTTACCAGT 104535
||| || ||
Sbjct 36837 CTTGCCGGT 36829
Score = 123 bits (136), Expect = 6e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| ||||||||||| |||||||| ||||| | || ||||| | ||| || || |||||
Sbjct 37679 TCCTTCTGAATATTGTAGTCAGAAAGAGTGCGTCCATCTTCCAATTGCTTGCCTGCAAAG 37620
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| | | ||||||||| || || || || ||||||||||| ||||||| || || ||
Sbjct 37619 ATCAATCGCTGTTGATCCGGTGGAATACCCTCTTTATCCTGGATCTTTGACTTGACGTTG 37560
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | || || || ||| || || | ||||||||||| || || | || || |||
Sbjct 37559 TCAATAGTGTCCGAAGATTCAACTTCCAACGTAATAGTCTTTCCGGTCAAGGTCTTGACA 37500
Query 104549 AATATCTGCAT 104559
|| ||||||||
Sbjct 37499 AAGATCTGCAT 37489
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151385226203244
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |