Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq148 86.0 4e-12 >seq148 Length=51035 Score = 86.0 bits (94), Expect = 4e-12 Identities = 129/177 (73%), Gaps = 6/177 (3%) Strand=Plus/Minus Query 44371 CAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCGTCGT-TCA 44429 |||||| | |||||||| || | || |||| || ||||||||||||||| ||| Sbjct 12960 CAAGGTACGCGTGAGGACCATCAAGGTTCCCCAGATTGGTGACAAGTTTGCGTCGCGTCA 12901 Query 44430 CGGCGCAAAAGGGGAC-ATGCGGAGCCGTCCTGAC-CCAGGAGGACATGCCCTTCGACAA 44487 ||| |||||||| || || | | | ||| | ||||||||| ||||| ||| || Sbjct 12900 TGGC-CAAAAGGGTACCATTGGTATCA--CCTACCGCCAGGAGGATATGCCTTTCACCAG 12844 Query 44488 AAACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGAC 44544 | | ||| | || || || ||||||||||| || |||||| ||||||| | ||||| Sbjct 12843 AGAGGGGATTGTCCCTGATCTCATCATCAATCCACACGCCATTCCCTCTCGCATGAC 12787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340133898133689