Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq148 82.4 5e-11 >seq148 Length=51035 Score = 82.4 bits (90), Expect = 5e-11 Identities = 128/177 (72%), Gaps = 6/177 (3%) Strand=Plus/Plus Query 71419 GTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCCTTG 71478 ||||| | ||||||| |||||| || ||||||||||| || || || | ||| || || Sbjct 12787 GTCATGCGAGAGGGAATGGCGTGTGGATTGATGATGAGATCAGGGACAATCCCCTCTCTG 12846 Query 71479 TCGAAGGGCATGTCCTCCTGG-GTCAGGACAGCTCCGCAT-GTCCCCTTTTGCGCCGTGA 71536 ||| ||||| ||||||||| | ||| | | | || || |||||||| ||| ||| Sbjct 12847 GTGAAAGGCATATCCTCCTGGCGGTAGG--TGATACCAATGGTACCCTTTTG-GCCATGA 12903 Query 71537 -ATGACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTG 71592 |||||||||||||| || |||| || | || |||||||| | |||||| Sbjct 12904 CGCGACGCAAACTTGTCACCAATCTGGGGAACCTTGATGGTCCTCACGCGTACCTTG 12960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338761113074472