Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq151 100 3e-16
>seq151
Length=50061
Score = 100 bits (110), Expect = 3e-16
Identities = 151/211 (72%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||| ||| | ||| ||||| ||||| | ||| || || || | |||| | || ||
Sbjct 37241 ACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCTTCG 37182
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
|| || || ||| |||| || | | ||| || || |||||||||||||| ||||| |
Sbjct 37181 AGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCCTGG 37122
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGTTT 94976
|| || | ||| || | ||| || || || ||| ||||| |||| |||||||| |
Sbjct 37121 ATCTTGGACTTCACATTGTCGATGGTATC-GC-TGGACTCGACCTCAAGAGTGATGGTCT 37064
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || |||||||| || || ||||| |||||
Sbjct 37063 TGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37033
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851
|| ||||||||| |||| ||| ||||| || | || || || | ||||
Sbjct 37704 TCTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGTCC 37645
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
||| |||| || || || ||||||| |||| || ||||| || |||||||| |||||
Sbjct 37644 ATCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTTT 37585
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
|| | || |||| ||||||| | | | |||||| | || || || | ||| ||
Sbjct 37584 ATCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAAT 37525
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| ||||| || | || || ||||||||||||||||
Sbjct 37524 AGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCATGC 37487
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448286195949480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |