Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq157 147 3e-31
seq434 143 4e-30
>seq157
Length=172430
Score = 147 bits (162), Expect = 3e-31
Identities = 121/145 (83%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATC-GCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
|||||||||||||| | |||||| | || || ||||||||||| ||||||||||| ||||
Sbjct 47272 CGCTAAGCGTCATCGGAAGATCT-TGCGCGACAACATCCAAGGTATCACCAAGCCCGCTA 47330
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
| || ||||| || ||||||||||| ||||||||| |||||| || ||||||| ||||
Sbjct 47331 TTCGACGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTATGAGGAGA 47390
Query 16551 TTCGTGATGTTTTGAAGATCTTCCT 16575
|||| ||| ||||||| ||||||
Sbjct 47391 CCCGTGGTGTCTTGAAGACCTTCCT 47415
>seq434
Length=128242
Score = 143 bits (158), Expect = 4e-30
Identities = 158/208 (76%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| ||||||||||| | ||| |||||| || ||||| || || |||||||| || || |
Sbjct 80318 CGCCAAGCGTCATCGAAAGAT-TCTTCGCGACAACATTCAGGGTATCACCAAACCTGCCA 80260
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
| |||||||| |||||||||||||| ||||||||| |||| | || |||| |||||||
Sbjct 80259 TTCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAAGAGA 80200
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
||| | || | || ||||||| | | || |||| ||||||| || ||| || |
Sbjct 80199 CTCGCGGCGTCCTCAAATCCTTCCTCGAATCTGTCATCCGTGATGCTGTCACCTACACTG 80140
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTC 16638
| ||||| || | ||||| ||||| ||
Sbjct 80139 AACACGCAAAGAGAAAGACCGTCACTTC 80112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074383523849
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |