Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq157 147 3e-31 seq434 143 4e-30 >seq157 Length=172430 Score = 147 bits (162), Expect = 3e-31 Identities = 121/145 (83%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATC-GCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 |||||||||||||| | |||||| | || || ||||||||||| ||||||||||| |||| Sbjct 47272 CGCTAAGCGTCATCGGAAGATCT-TGCGCGACAACATCCAAGGTATCACCAAGCCCGCTA 47330 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | || ||||| || ||||||||||| ||||||||| |||||| || ||||||| |||| Sbjct 47331 TTCGACGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTATGAGGAGA 47390 Query 16551 TTCGTGATGTTTTGAAGATCTTCCT 16575 |||| ||| ||||||| |||||| Sbjct 47391 CCCGTGGTGTCTTGAAGACCTTCCT 47415 >seq434 Length=128242 Score = 143 bits (158), Expect = 4e-30 Identities = 158/208 (76%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||||||||| | ||| |||||| || ||||| || || |||||||| || || | Sbjct 80318 CGCCAAGCGTCATCGAAAGAT-TCTTCGCGACAACATTCAGGGTATCACCAAACCTGCCA 80260 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | |||||||| |||||||||||||| ||||||||| |||| | || |||| ||||||| Sbjct 80259 TTCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAAGAGA 80200 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 ||| | || | || ||||||| | | || |||| ||||||| || ||| || | Sbjct 80199 CTCGCGGCGTCCTCAAATCCTTCCTCGAATCTGTCATCCGTGATGCTGTCACCTACACTG 80140 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTC 16638 | ||||| || | ||||| ||||| || Sbjct 80139 AACACGCAAAGAGAAAGACCGTCACTTC 80112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074383523849