Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq292 194 2e-44 >seq292 Length=28646 Score = 194 bits (214), Expect = 2e-44 Identities = 678/1046 (65%), Gaps = 12/1046 (1%) Strand=Plus/Plus Query 62991 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 63050 || || ||||| ||||| || |||||||| ||||| || | ||||| ||||| || || Sbjct 10936 TGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATATAAGGAGTCCCAGTCTCGGTC 10995 Query 63051 TGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGATTTGTATCTCCT 63109 || | ||||| ||||| | ||| | | || | ||||| | | | | ||| | Sbjct 10996 TGTGCTTCTAGGATCGCATACCACAACTTCTGG-GCCTTGACCGTC--TGACGACCTCGT 11052 Query 63110 TTCTCTTTCGTATAGTGT--ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT 63167 ||||||| ||| ||| ||| | ||||| || || || | |||| | | Sbjct 11053 CCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGCCATAGACATCAGCAAGG 11112 Query 63168 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63227 || || |||| ||||| | || | ||| ||| || | || || ||| |||| Sbjct 11113 CCCGGTGCCTCATGAGGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGTCTCATG 11172 Query 63228 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63287 || ||||| ||| ||||||| || ||| | || | || | | || || ||||| Sbjct 11173 AATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCG 11232 Query 63288 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63347 |||||| | || | || | | | | ||| | ||||| || |||| || ||| Sbjct 11233 TGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATG 11292 Query 63348 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63407 || | | || || || || || || ||||| || | || | || ||||| || | Sbjct 11293 GCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCACATAACGGGCAGTGTTGTTGAAG 11352 Query 63408 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCA 63467 || | | ||| ||||| | ||| || || | || ||||| |||| |||||| ||| Sbjct 11353 ACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAGGAACCA 11412 Query 63468 CTGGCACGAATATTACTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 63526 | |||||||| | | | | | || || || || || || | || ||||| | || Sbjct 11413 GTAGCACGAATGCAA-TGAGCGTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGC 11471 Query 63527 GCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAA 63586 || || | ||||| || || ||||| ||||| || || |||||| | | || Sbjct 11472 ACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAA 11531 Query 63587 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 63646 || |||| ||| | | ||| || ||||| || | || ||||| ||||| || Sbjct 11532 GCATGAGGACAATTGAGGTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGT 11591 Query 63647 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATG 63706 || || || | || | || ||||| ||||| || || || || || | ||| Sbjct 11592 GAAGCACTTCTGGGACATGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATG 11651 Query 63707 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT-GTTTA 63765 || || ||||| |||||||| | |||||| || ||||| || | | |||||| | | Sbjct 11652 GATGCCAACTGCCACACGCATGAGCATGTGTTGCGGTCTCTCGGCCA-CTTGTTTGCCAA 11710 Query 63766 TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 63825 | || | || || ||| |||||||||| || || || || || | ||| ||||||| Sbjct 11711 TCTTGAGCAGATATGATCTTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTC 11770 Query 63826 GTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGA 63885 | ||||||| || ||||||| || | ||| || | | |||| | || ||| Sbjct 11771 GGTCGTAAACGATGGCCGAGTTCAGCTCATCAGCATGTCTCATAAC-ACATTCATACGTC 11829 Query 63886 TACTTGAA-ATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCC 63944 | || | | || || ||||| || ||| || || || || | ||||| | | | |||| Sbjct 11830 TCCTGGGAGATCATAGGAGAGTGCTTCTTGTTCTTGGGGTTGATATAGTAGTAGAGATCC 11889 Query 63945 TCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTG 64004 || ||| | ||| |||| || || | |||||| ||||| || ||||| || | Sbjct 11890 GACACCACCGAAGAGAATTGTTTCTTAGTCTGCTTGTGGAGATTGGACACGGCGATACGC 11949 Query 64005 GCGGCTAGAATGGCATAATCCGGATG 64030 || || || ||||||||||| ||||| Sbjct 11950 GCTGCGAGGATGGCATAATCGGGATG 11975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622940246351880