Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq151 122 8e-23
seq292 86.0 6e-12
>seq151
Length=50061
Score = 122 bits (134), Expect = 8e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | ||||| || || || ||||| || | ||||| | ||| | ||||||
Sbjct 37261 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATCACACTGGAAGTGGAATCATCA 37320
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| ||||| | || ||| |||||| ||||| ||||| || || || || |||
Sbjct 37321 GACACGATCGACAATGTAAAATCGAAGATTCAAGACAAGGAAGGAATTCCGCCGGACCAA 37380
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||| || | || | || || |||||| | ||||| | | ||| ||||||||||||||
Sbjct 37381 CAACGATTGATCTTCGCTGGAAAACAATTAGAAGACGGTCGAACTCTCAGCGACTATAAC 37440
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|| || || || || ||| ||||||| |||||
Sbjct 37441 ATCCAGAAGGAGTCGACTCTCCATCTCGTCCT 37472
Score = 120 bits (132), Expect = 3e-22
Identities = 132/176 (75%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 26805 ATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 26864
|||||| |||| | || || | ||| |||||||| | || || |||||| |||
Sbjct 36841 ATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAATGTAAAGTCCAAGATTCAGGAC 36900
Query 26865 AAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT 26924
|| ||||| || ||||| ||||||||| | ||||||| || ||||||||| ||||| |||
Sbjct 36901 AAGGAAGGCATTCCTCCTGATCAACAACGTCTCATTTTCGCCGGCAAACAGCTCGAGGAT 36960
Query 26925 GATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
| | | | | || || || |||||||| ||||||||||| | ||| |||||||
Sbjct 36961 GGCCGCACCTTGAGTGATTACAACATTCAGAAAGAATCTACCTTGCATTTGGTCCT 37016
Score = 113 bits (124), Expect = 4e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || | || || || | ||||| | || | || || | |
Sbjct 37033 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 37092
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| |||||||| | || || ||||| ||||| ||||| || |||||||| |||
Sbjct 37093 GATACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 37152
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||| | ||||||| | |||||| ||||||||||| | | | |||| ||||| |||
Sbjct 37153 CAACGTCTCATTTTTGCCGGCAAGCAACTCGAAGACGGCCGCACTCTCAGTGACTACAAC 37212
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|| ||||||||||| ||| | || ||||||||
Sbjct 37213 ATCCAAAAAGAATCGACTCTTCACCTGGTCCT 37244
>seq292
Length=28646
Score = 86.0 bits (94), Expect = 6e-12
Identities = 178/264 (67%), Gaps = 6/264 (2%)
Strand=Plus/Plus
Query 148620 TTCAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGCACAATCGTTGAGTGTTTTATAG 148679
|| ||||| || ||||| | || || ||||| |||||| ||||| || | ||
Sbjct 11434 TTGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTTGAGAGTGTCGTAA 11493
Query 148680 ATGCCGTTAATACTGTCCTCTTGAATGTTAAGCAGGTAGCACGATGACATTTGAGGCATT 148739
|| || | ||| |||||||||| |||| | || | |||| || |||| |||||| |
Sbjct 11494 ATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAATTGAGG---T 11550
Query 148740 TTCA---TGCCAGACGAAAATAGAGTTGGACTAGCGTGAGTGAACAGCTTTGCCCGCATC 148796
| | |||| | || ||||||||| ||||| ||||| ||| |||
Sbjct 11551 TGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTTCTGGGACATG 11610
Query 148797 AATCTATAGGATTCGATAGCGCTTTCGATGTCATCACCATGAATCTGTAGAGCTACACGC 148856
| | |||| || || || | ||||||||||| ||||| || | || ||||||
Sbjct 11611 AGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATGGATGCCAACTGCCACACGC 11670
Query 148857 ATCAGCATGTGTTGAGGCCTCTCG 148880
|| ||||||||||| || ||||||
Sbjct 11671 ATGAGCATGTGTTGCGGTCTCTCG 11694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478657056930960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |