Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq151 122 8e-23 seq292 86.0 6e-12 >seq151 Length=50061 Score = 122 bits (134), Expect = 8e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || || ||||| || | ||||| | ||| | |||||| Sbjct 37261 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATCACACTGGAAGTGGAATCATCA 37320 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || ||| |||||| ||||| ||||| || || || || ||| Sbjct 37321 GACACGATCGACAATGTAAAATCGAAGATTCAAGACAAGGAAGGAATTCCGCCGGACCAA 37380 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| || | || | || || |||||| | ||||| | | ||| |||||||||||||| Sbjct 37381 CAACGATTGATCTTCGCTGGAAAACAATTAGAAGACGGTCGAACTCTCAGCGACTATAAC 37440 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || || || || ||| ||||||| ||||| Sbjct 37441 ATCCAGAAGGAGTCGACTCTCCATCTCGTCCT 37472 Score = 120 bits (132), Expect = 3e-22 Identities = 132/176 (75%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 26805 ATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 26864 |||||| |||| | || || | ||| |||||||| | || || |||||| ||| Sbjct 36841 ATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAATGTAAAGTCCAAGATTCAGGAC 36900 Query 26865 AAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT 26924 || ||||| || ||||| ||||||||| | ||||||| || ||||||||| ||||| ||| Sbjct 36901 AAGGAAGGCATTCCTCCTGATCAACAACGTCTCATTTTCGCCGGCAAACAGCTCGAGGAT 36960 Query 26925 GATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 | | | | | || || || |||||||| ||||||||||| | ||| ||||||| Sbjct 36961 GGCCGCACCTTGAGTGATTACAACATTCAGAAAGAATCTACCTTGCATTTGGTCCT 37016 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || | || || || | ||||| | || | || || | | Sbjct 37033 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 37092 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || |||||||| | || || ||||| ||||| ||||| || |||||||| ||| Sbjct 37093 GATACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 37152 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||||| | |||||| ||||||||||| | | | |||| ||||| ||| Sbjct 37153 CAACGTCTCATTTTTGCCGGCAAGCAACTCGAAGACGGCCGCACTCTCAGTGACTACAAC 37212 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||||||||| ||| | || |||||||| Sbjct 37213 ATCCAAAAAGAATCGACTCTTCACCTGGTCCT 37244 >seq292 Length=28646 Score = 86.0 bits (94), Expect = 6e-12 Identities = 178/264 (67%), Gaps = 6/264 (2%) Strand=Plus/Plus Query 148620 TTCAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGCACAATCGTTGAGTGTTTTATAG 148679 || ||||| || ||||| | || || ||||| |||||| ||||| || | || Sbjct 11434 TTGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTTGAGAGTGTCGTAA 11493 Query 148680 ATGCCGTTAATACTGTCCTCTTGAATGTTAAGCAGGTAGCACGATGACATTTGAGGCATT 148739 || || | ||| |||||||||| |||| | || | |||| || |||| |||||| | Sbjct 11494 ATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAATTGAGG---T 11550 Query 148740 TTCA---TGCCAGACGAAAATAGAGTTGGACTAGCGTGAGTGAACAGCTTTGCCCGCATC 148796 | | |||| | || ||||||||| ||||| ||||| ||| ||| Sbjct 11551 TGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTTCTGGGACATG 11610 Query 148797 AATCTATAGGATTCGATAGCGCTTTCGATGTCATCACCATGAATCTGTAGAGCTACACGC 148856 | | |||| || || || | ||||||||||| ||||| || | || |||||| Sbjct 11611 AGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATGGATGCCAACTGCCACACGC 11670 Query 148857 ATCAGCATGTGTTGAGGCCTCTCG 148880 || ||||||||||| || |||||| Sbjct 11671 ATGAGCATGTGTTGCGGTCTCTCG 11694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478657056930960