Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq292 230 6e-55
>seq292
Length=28646
Score = 230 bits (254), Expect = 6e-55
Identities = 1038/1630 (64%), Gaps = 34/1630 (2%)
Strand=Plus/Minus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| |||||| | ||||| ||| |||||| || |||| | || || |||| ||
Sbjct 11594 TTCACCCACGCCTCTCCAACTCTGTTCAATGCCGGCACTCCGCAACCTCAATTGTCCTCA 11535
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| | | | ||||| || || ||| ||||| || | ||||| || |||| |
Sbjct 11534 TGCTTCTTGGTCGACATGAAAGAGGACAGCATTGAGGGAATTTACGACACTCTCAAGACT 11475
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATG--TTCGTG 363724
|||||| | || ||||||| ||| ||||| ||||| | | | | || || ||||||
Sbjct 11474 TGTGCTATGATCTCCAAGACTGCTGGCGGTATTGGCCT--CAACGCTCATTGCATTCGTG 11417
Query 363725 C-ACAGAACAGTTAC---ATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATG 363780
| || | ||| | ||| ||| || || || ||||| || ||||||||
Sbjct 11416 CTACTG----GTTCCTATATTGCCGGGACCAACGGCACTTCCAATGGTCTCATTCCCATG 11361
Query 363781 CTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGG 363840
|||||||| || |||| ||||| | || || ||||||||||| ||||| ||
Sbjct 11360 CTTCGTGTCTTCAACAACACTGCCCGTTATGTGGACCAGGGTGGCAATAAGCGTCCCGGT 11301
Query 363841 GCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGG 363900
|| ||||| || ||||| ||||| || || ||| | || || | || | || |
Sbjct 11300 GCCTTTGCCATCTATCTGGAGCCATGGCACGCGGATGTCTTCGATTGGCTGAACCTGAGA 11241
Query 363901 AAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCT 363960
|| ||| ||||| || || | || || ||||| |||| |||||||||||| | |
Sbjct 11240 AAGAACCACGGAAAGGAAGAGGTTCGCGCCCGTGACTTGTTTTATGCACTTTGGACTCCG 11181
Query 363961 GACCATTTTATGAAGCGCGTGGAG-GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGA 364019
|| | || |||| || || ||| | ||| | ||| | || || || || || ||
Sbjct 11180 GATCTATTCATGAGACGTGTCGAGAAGAACCAAG-ACTGGACTCTGTTCTGTCCTCATGA 11122
Query 364020 ATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGA 364079
|| || ||| | ||||| | || || || | | ||| || || ||| |||||||
Sbjct 11121 GGCACCGGGCCTTGCTGATGTCTATGGCGAGGAATTCGATGCCCTCTATGAACAGTATGA 11062
Query 364080 ATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGA 364139
|||||| | |||| |||| | || |||||| | |||| ||| ||| | ||
Sbjct 11061 GAAAGAGGGACGAGGTCGTCAGACGGTCAAGGCCCAGAAGTTGTGGTATGCGATCCTAGA 11002
Query 364140 TTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTC 364199
| |||| ||||| || || || |||||| | ||||| ||| | |||||| |||
Sbjct 11001 AGCACAGACCGAGACTGGGACTCCTTATATGCTTTACAAGGATGCCTGCAACAAGAAGAG 10942
Query 364200 CAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATA 364259
||||||| || |||| || ||||| | | ||| || || || || ||| | || ||
Sbjct 10941 CAACCAGAAGAACCTGGGGACAATCCGGAGCTCCAATCTGTGCACGGAAATTGTCGAGTA 10882
Query 364260 CACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319
|| || || || |||| || || || || || || || | || ||||| | || ||
Sbjct 10881 CAGTGCCCCAGATGAGATCGCTGTCTGCAATCTCGCCTCTCTGGCTCTTCCAACCTTCGT 10822
Query 364320 ---AAAAG---ATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTAC 364373
||| ||| | |||| | |||| |||| || ||| | | ||
Sbjct 10821 CGATCAAGCCCGAGGTGAATATGACTTTGGCCGTCTTCATGAAGTTACCCAAGTCGTCAC 10762
Query 364374 TTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTC 364433
| | || | ||||| | ||||| | || || || || | || |||||| |
Sbjct 10761 TCGAAACTTGAACAAGATCATCGATATCAACTACTACCCTGTGCCCGAAGCCAGGAAGAG 10702
Query 364434 TAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGAT 364493
|| | || || || || ||||||||||||| ||||| || || || | || | |
Sbjct 10701 CAACTTCCGACACCGACCTGTTGGTCTTGGTGTTCAGGGTCTTGCAGATGCCTTCCT--T 10644
Query 364494 GC--TCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAA 364551
|| | | | || || || || || || ||| || || | | || || |||
Sbjct 10643 GCTTTGCGTCTTCCTTTCGACTCTCCAGAGGCCCGTCAACTCAACATCCAAATTTTCGAA 10584
Query 364552 ACAATGTATTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGGAAAGTA 364610
|| || || ||| || ||||||| || || | | | | ||| | ||| || ||
Sbjct 10583 ACCATCTACCATGCAGCTCTGACTGCGTCATGCGAACTCGCCAAGGAACAA-GGTCCCTA 10525
Query 364611 CTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGT 364670
|| |||||||| ||| | || || || | | |||| |||| | ||||||||
Sbjct 10524 TGAGACCTATGAGGGCAGCCCGGTCTCACAAGGTATCCTTCAGTATGATATGTGGAATGT 10465
Query 364671 CACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTAC 364730
|| || || | | |||| | |||||| | | | | || || ||||||
Sbjct 10464 TACTCCTTCAGATCTATGGGATTGGGATGCATTGAAAGCTGAGATTGCTAAACATGGTGT 10405
Query 364731 TCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAA 364790
||||||||| ||| || || || ||||| || || || || | || ||| | || ||
Sbjct 10404 TCGCAACTCTCTCCTTGTTGCCCCTATGCCTACTGCATCCACCTCTCAAATCTTGGGCAA 10345
Query 364791 CAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGA 364850
|||||| |||||||| || | || ||| | || || || || || | | || ||
Sbjct 10344 CAACGAATGCTTCGAGCCATACACGTCCAACATCTACTCCCGTCGTGTGTTGGCTGGTGA 10285
Query 364851 ATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGA 364910
||| | || || ||| | || | |||||| | |||| || || ||| ||
Sbjct 10284 ATTCCAAGTCGTCAATCCCTGGCTCTTGAAGGATTTGGTTGACCTTGGTCTCTGGTCCGA 10225
Query 364911 CAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCC 364970
|| |||||||||| ||||| || | || || | |||||||| || | ||
Sbjct 10224 CAACATGAAGAACAGAATCATTGCGGAAGGCGGCTCCATTCAGAACATCCCCAACATCCC 10165
Query 364971 AGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGA 365030
| || | || || | ||||| || || |||||||| | || || || | |
Sbjct 10164 TGCTGACATCAAAGCTCTATACAAGACGGTCTGGGAAATCAGCCAACGCACCGTCCTCCA 10105
Query 365031 TATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGAC 365090
||||| || || || |||||||| || ||| ||| || | ||| || ||| |
Sbjct 10104 GATGGCTGCTGACCGTGGTGCTTTCATTGATCAATCCCAATCTCTCAAC--ATCCAT--C 10049
Query 365091 TC----AGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTC 365146
|| |||| || | |||| | ||||||||||| ||| || ||||| || |
Sbjct 10048 TCAAGGAGCCCACTATGGGCAAGATCACATCCATGCACTTCGCTGGCTGGAAGATGGGGC 9989
Query 365147 TTAAGACAGG 365156
| ||||| ||
Sbjct 9988 TGAAGACTGG 9979
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303338687598326
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |